; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013213 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013213
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionchloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like
Genome locationscaffold459:1243982..1246162
RNA-Seq ExpressionMS013213
SyntenyMS013213
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR001328 - Peptidyl-tRNA hydrolase
IPR018171 - Peptidyl-tRNA hydrolase, conserved site
IPR036416 - Peptidyl-tRNA hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607055.1 Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.9e-12792.74Show/hide
Query:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI
        MLYA SV SVCL SNSS AHF  R  KRLVPTRLSVRASL DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGI
Subjt:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMD+KAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
        QKF SVERKQIDAALEQGVEAVRTLAL GFS+ V+RFNLTQKYKY+KV
Subjt:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV

XP_022148094.1 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Momordica charantia]3.7e-139100Show/hide
Query:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI
        MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI
Subjt:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
        QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
Subjt:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV

XP_022998092.1 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita maxima]1.0e-12893.55Show/hide
Query:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI
        MLYA SV SVCL SNSSSAHF  R  KRLVPTRLSVRASL DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGI
Subjt:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
        QKF SVERKQIDAALEQGVEAVRTLAL GFS+ V+RFNLTQKYKY+KV
Subjt:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV

XP_023523313.1 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita pepo subsp. pepo]6.6e-12893.15Show/hide
Query:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI
        MLYA SV SVCL SNSS AHF  R  KRLVPTRLSVRASL DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGI
Subjt:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
        QKF SVERKQIDAALEQGVEAVRTLAL GFS+ V+RFNLTQKYKY+KV
Subjt:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV

XP_038899626.1 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Benincasa hispida]1.1e-13094.35Show/hide
Query:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI
        MLYA SVQSVCL SNSS+AHF PR  K LV TRLS+RASL DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGI
Subjt:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
        QKF SVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKY+KV
Subjt:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV

TrEMBL top hitse value%identityAlignment
A0A0A0LCC6 Uncharacterized protein1.5e-12289.96Show/hide
Query:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDND-NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIG
        ML+A S QSV L SNSSSAHF     K LV TRLSVRAS  D+D NG+KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIG
Subjt:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDND-NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIG

Query:  IGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL
        IGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRH+LL YDEM+LPNGVLRLQPK GHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL
Subjt:  IGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL

Query:  LQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
        LQKF SVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL+QKYKY+KV
Subjt:  LQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV

A0A1S3CFG5 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic7.4e-12591.2Show/hide
Query:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASL--LDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALI
        MLYA S QSV L SNSS+AH+     K LV TRLSVRASL   DN+NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALI
Subjt:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASL--LDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALI

Query:  GIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF
        GIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF
Subjt:  GIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF

Query:  LLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
        LLQKF SVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNL+QKYKY+KV
Subjt:  LLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV

A0A6J1D2Z6 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like1.8e-139100Show/hide
Query:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI
        MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI
Subjt:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
        QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
Subjt:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV

A0A6J1G9M7 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like2.1e-12792.34Show/hide
Query:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI
        MLYA SV SVCL SNSS AHF  R  KRLVPTRLSVRASL DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGF+MIDSIAQAQ ILMNTIQSKALIGI
Subjt:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMD+KAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
        QKF SVERKQIDAALEQGVEAVRTLAL GFS+ V+RFNLTQKYKY+KV
Subjt:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV

A0A6J1K6X4 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like4.9e-12993.55Show/hide
Query:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI
        MLYA SV SVCL SNSSSAHF  R  KRLVPTRLSVRASL DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGI
Subjt:  MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
        QKF SVERKQIDAALEQGVEAVRTLAL GFS+ V+RFNLTQKYKY+KV
Subjt:  QKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV

SwissProt top hitse value%identityAlignment
Q5ZCL8 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic8.5e-8666.24Show/hide
Query:  LLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLA
        LL ++++   R RLR+     R++V AS+ D       EYTPWLI GLGNPG+KYHGTRHNVGFEM+D IA+ + I MNTIQSK+L+GIGSIGEVP+LL 
Subjt:  LLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLA

Query:  KPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQI
        KPQ+Y+N+ GE++GPLAA+YQ+PLRHIL++YDEMSLPNGVLRLQ KGGHG HNG+++VM  LD  RE PRL IGIG+PPG MD +AFLLQKF S ER QI
Subjt:  KPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQI

Query:  DAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV
        D ALEQGV+AVRTL L GFS  + RFNL QKYK++ V
Subjt:  DAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNKV

Q6NLS8 Peptidyl-tRNA hydrolase, mitochondrial2.4e-6457.87Show/hide
Query:  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNG
        + PWL +GLGNPG+KY GTRHN+GFEMID  A++  I MN +  KA++G G + ++P++LAKPQTYMN  GES GPLAA+Y++PL  +L+V+D+M LP G
Subjt:  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNG

Query:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNK
        VLRLQ KGGHG HNG+KSVM H  G REF RL IGIG PPG MD KAFLLQKF    R+++D AL +GV+A++ +    F +    FN+ QKYK+ K
Subjt:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNK

Q9FKN4 Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic2.2e-8973.95Show/hide
Query:  SVRASLLDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI
        S+RASL  +DN  +K EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A DI MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQI
Subjt:  SVRASLLDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI

Query:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQR
        PLRHIL++YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFLLQKF  +ERKQ+D  LEQGVE V+TL   GFS  
Subjt:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQR

Query:  VNRFNLTQKYKYNKV
        ++RFNL QKYK++KV
Subjt:  VNRFNLTQKYKYNKV

Q9LF14 Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic1.0e-9479.02Show/hide
Query:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYD
        D+  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID +A+ + +LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRHIL++YD
Subjt:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYD

Query:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKY
        EM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAFLLQKF  +E+KQI+ ALEQG EAV+TL LNGF+Q ++RFNL QKY
Subjt:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKY

Query:  KYNKV
        K++KV
Subjt:  KYNKV

Q9M5P4 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic9.0e-8870.64Show/hide
Query:  PTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAH
        P   +V +S+ D   G  VEYTPWLI GLGNPGNKY+GTRHNVGFEM+D IA  + I MNTIQSK+L+GIGSIGEVP+L+ KPQ+YMN+ GE++GPLAA+
Subjt:  PTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAH

Query:  YQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGF
        YQ+PLRHILL+YD+ SLPNGVLRLQ KGGHG HNG+++V+ HLDGRREFPRL IGIG+PPG MD +AFLLQKF S ER QID ALEQGV+AVRTL L GF
Subjt:  YQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGF

Query:  SQRVNRFNLTQKYKYNKV
        S    RFNL QKYK+++V
Subjt:  SQRVNRFNLTQKYKYNKV

Arabidopsis top hitse value%identityAlignment
AT5G16140.1 Peptidyl-tRNA hydrolase family protein7.1e-9679.02Show/hide
Query:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYD
        D+  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID +A+ + +LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRHIL++YD
Subjt:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYD

Query:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKY
        EM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAFLLQKF  +E+KQI+ ALEQG EAV+TL LNGF+Q ++RFNL QKY
Subjt:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKY

Query:  KYNKV
        K++KV
Subjt:  KYNKV

AT5G16140.2 Peptidyl-tRNA hydrolase family protein7.1e-9679.02Show/hide
Query:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYD
        D+  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID +A+ + +LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRHIL++YD
Subjt:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYD

Query:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKY
        EM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAFLLQKF  +E+KQI+ ALEQG EAV+TL LNGF+Q ++RFNL QKY
Subjt:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKY

Query:  KYNKV
        K++KV
Subjt:  KYNKV

AT5G19830.1 Peptidyl-tRNA hydrolase family protein1.7e-6557.87Show/hide
Query:  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNG
        + PWL +GLGNPG+KY GTRHN+GFEMID  A++  I MN +  KA++G G + ++P++LAKPQTYMN  GES GPLAA+Y++PL  +L+V+D+M LP G
Subjt:  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNG

Query:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNK
        VLRLQ KGGHG HNG+KSVM H  G REF RL IGIG PPG MD KAFLLQKF    R+++D AL +GV+A++ +    F +    FN+ QKYK+ K
Subjt:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLTQKYKYNK

AT5G38290.1 Peptidyl-tRNA hydrolase family protein1.5e-9073.95Show/hide
Query:  SVRASLLDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI
        S+RASL  +DN  +K EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A DI MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQI
Subjt:  SVRASLLDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI

Query:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQR
        PLRHIL++YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFLLQKF  +ERKQ+D  LEQGVE V+TL   GFS  
Subjt:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQR

Query:  VNRFNLTQKYKYNKV
        ++RFNL QKYK++KV
Subjt:  VNRFNLTQKYKYNKV

AT5G38290.2 Peptidyl-tRNA hydrolase family protein1.5e-9073.95Show/hide
Query:  SVRASLLDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI
        S+RASL  +DN  +K EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A DI MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQI
Subjt:  SVRASLLDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI

Query:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQR
        PLRHIL++YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFLLQKF  +ERKQ+D  LEQGVE V+TL   GFS  
Subjt:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVEAVRTLALNGFSQR

Query:  VNRFNLTQKYKYNKV
        ++RFNL QKYK++KV
Subjt:  VNRFNLTQKYKYNKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATATGCAGTATCGGTCCAAAGTGTTTGCTTATTGTCCAATTCGAGTAGCGCCCATTTCCGTCCTCGTTTGCGAAAGCGTCTAGTTCCGACGAGACTCTCCGTTCG
AGCTTCGTTGCTTGACAATGATAATGGCGTTAAAGTGGAGTATACTCCGTGGCTTATTGTTGGACTGGGTAACCCTGGAAATAAGTACCATGGGACTAGGCACAATGTTG
GTTTCGAAATGATTGATAGTATTGCTCAAGCGCAGGACATTTTGATGAACACAATTCAATCCAAAGCTCTGATTGGAATAGGTTCAATTGGAGAAGTGCCAATTTTGTTG
GCAAAGCCTCAGACTTACATGAATTTCTGCGGAGAATCGGTTGGACCACTTGCTGCACATTATCAAATACCTTTACGGCATATCTTGTTGGTTTATGATGAAATGAGCTT
GCCAAATGGCGTTCTCAGGCTACAGCCAAAAGGAGGACATGGCCATCATAATGGGGTGAAGAGTGTAATGGGACATCTGGATGGCCGACGTGAGTTTCCCCGACTATGCA
TTGGAATTGGAAACCCACCTGGAACTATGGACATGAAAGCTTTTCTTCTCCAGAAGTTTGGTTCAGTTGAGCGAAAACAGATCGATGCGGCACTGGAACAGGGGGTTGAG
GCAGTGAGAACTCTTGCACTGAACGGATTTAGTCAAAGAGTCAACAGATTCAACTTGACCCAGAAATACAAGTATAATAAGGTT
mRNA sequenceShow/hide mRNA sequence
ATGTTATATGCAGTATCGGTCCAAAGTGTTTGCTTATTGTCCAATTCGAGTAGCGCCCATTTCCGTCCTCGTTTGCGAAAGCGTCTAGTTCCGACGAGACTCTCCGTTCG
AGCTTCGTTGCTTGACAATGATAATGGCGTTAAAGTGGAGTATACTCCGTGGCTTATTGTTGGACTGGGTAACCCTGGAAATAAGTACCATGGGACTAGGCACAATGTTG
GTTTCGAAATGATTGATAGTATTGCTCAAGCGCAGGACATTTTGATGAACACAATTCAATCCAAAGCTCTGATTGGAATAGGTTCAATTGGAGAAGTGCCAATTTTGTTG
GCAAAGCCTCAGACTTACATGAATTTCTGCGGAGAATCGGTTGGACCACTTGCTGCACATTATCAAATACCTTTACGGCATATCTTGTTGGTTTATGATGAAATGAGCTT
GCCAAATGGCGTTCTCAGGCTACAGCCAAAAGGAGGACATGGCCATCATAATGGGGTGAAGAGTGTAATGGGACATCTGGATGGCCGACGTGAGTTTCCCCGACTATGCA
TTGGAATTGGAAACCCACCTGGAACTATGGACATGAAAGCTTTTCTTCTCCAGAAGTTTGGTTCAGTTGAGCGAAAACAGATCGATGCGGCACTGGAACAGGGGGTTGAG
GCAGTGAGAACTCTTGCACTGAACGGATTTAGTCAAAGAGTCAACAGATTCAACTTGACCCAGAAATACAAGTATAATAAGGTT
Protein sequenceShow/hide protein sequence
MLYAVSVQSVCLLSNSSSAHFRPRLRKRLVPTRLSVRASLLDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQDILMNTIQSKALIGIGSIGEVPILL
AKPQTYMNFCGESVGPLAAHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFGSVERKQIDAALEQGVE
AVRTLALNGFSQRVNRFNLTQKYKYNKV