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MS013216 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013216
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReticulon family protein
Genome locationscaffold459:1266566..1266883
RNA-Seq ExpressionMS013216
SyntenyMS013216
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER32793.1 reticulon family protein [Striga asiatica]2.5e-0736.36Show/hide
Query:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITI---QLWLQH-IHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRR
        P P++E   +    + SW+  +  P++P    + +   +   +H  H+   V+LV VAR  A+A E R V  VGDD E ++AV  +PLG L+P+G    R
Subjt:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITI---QLWLQH-IHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRR

Query:  RHFRVVAAAA
         H   VAAAA
Subjt:  RHFRVVAAAA

KAA0058092.1 hypothetical protein E6C27_scaffold274G004000 [Cucumis melo var. makuwa]1.5e-0937.74Show/hide
Query:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITIQLWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHFR
        P  +++  G I   +   MRA+ GP++PS  P+ + L      + W V+LVHV R  A  LED  +  +GDD  G  +V+ +PLGTL+P+  +    HF 
Subjt:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITIQLWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHFR

Query:  VVAAAA
         VAA+A
Subjt:  VVAAAA

KAG7023305.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-0440.48Show/hide
Query:  ASLGPINPSNAPITIQLWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHFRVVAA
        A+ GP++PS  P+ I        +   V+LVHV RG A+  ED  V  VGD+  G+ +V L+PLG L+P+  V    H   VAA
Subjt:  ASLGPINPSNAPITIQLWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHFRVVAA

PKA54109.1 hypothetical protein AXF42_Ash018119 [Apostasia shenzhenica]7.4e-0434.58Show/hide
Query:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITIQ-LWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHF
        P+P+Q+L G  +  K   M A+ GP++P  AP+  +       H    V++       A A ED     VG+D EG++A  L+PLG L+P    +   H 
Subjt:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITIQ-LWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHF

Query:  RVVAAAA
          VAAAA
Subjt:  RVVAAAA

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ5 Uncharacterized protein2.8e-0939.62Show/hide
Query:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITIQLWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHFR
        P P+++  G I  ++   + A+ GPI+PS  P+ + L     ++   V+LVHVAR  A  LED  +  VGDD  G  +V+ +PLGTL+P+  +    HF 
Subjt:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITIQLWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHFR

Query:  VVAAAA
        VVAA+A
Subjt:  VVAAAA

A0A2I0AEY0 Uncharacterized protein3.6e-0434.58Show/hide
Query:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITIQ-LWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHF
        P+P+Q+L G  +  K   M A+ GP++P  AP+  +       H    V++       A A ED     VG+D EG++A  L+PLG L+P    +   H 
Subjt:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITIQ-LWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHF

Query:  RVVAAAA
          VAAAA
Subjt:  RVVAAAA

A0A5A7PIV6 Reticulon family protein1.2e-0736.36Show/hide
Query:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITI---QLWLQH-IHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRR
        P P++E   +    + SW+  +  P++P    + +   +   +H  H+   V+LV VAR  A+A E R V  VGDD E ++AV  +PLG L+P+G    R
Subjt:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITI---QLWLQH-IHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRR

Query:  RHFRVVAAAA
         H   VAAAA
Subjt:  RHFRVVAAAA

A0A5D3DYP5 Uncharacterized protein7.5e-1037.74Show/hide
Query:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITIQLWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHFR
        P  +++  G I   +   MRA+ GP++PS  P+ + L      + W V+LVHV R  A  LED  +  +GDD  G  +V+ +PLGTL+P+  +    HF 
Subjt:  PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITIQLWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHFR

Query:  VVAAAA
         VAA+A
Subjt:  VVAAAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTTATCCAATTCAAGAACTCATCGGTTATATCATTCCATCCAAATTTTCTTGGATGAGGGCCTCCCTTGGACCAATCAACCCAAGTAATGCTCCTATTACAATTCAACT
GTGGCTCCAACATATTCACCAAAGTTGGTATGTAATGCTCGTCCATGTAGCAAGGGGGGAGGCAATGGCTCTTGAAGATCGGATAGTACCTCGTGTCGGAGACGATGCGG
AGGGCAAGCTCGCGGTGTATCTCAAACCACTGGGAACCCTTTCGCCAATCGGTTACGTTCACCGCAGGCGACATTTTAGGGTTGTAGCGGCCGCGGCC
mRNA sequenceShow/hide mRNA sequence
CCTTATCCAATTCAAGAACTCATCGGTTATATCATTCCATCCAAATTTTCTTGGATGAGGGCCTCCCTTGGACCAATCAACCCAAGTAATGCTCCTATTACAATTCAACT
GTGGCTCCAACATATTCACCAAAGTTGGTATGTAATGCTCGTCCATGTAGCAAGGGGGGAGGCAATGGCTCTTGAAGATCGGATAGTACCTCGTGTCGGAGACGATGCGG
AGGGCAAGCTCGCGGTGTATCTCAAACCACTGGGAACCCTTTCGCCAATCGGTTACGTTCACCGCAGGCGACATTTTAGGGTTGTAGCGGCCGCGGCC
Protein sequenceShow/hide protein sequence
PYPIQELIGYIIPSKFSWMRASLGPINPSNAPITIQLWLQHIHQSWYVMLVHVARGEAMALEDRIVPRVGDDAEGKLAVYLKPLGTLSPIGYVHRRRHFRVVAAAA