CuGenDBv2

Gene ID	MS013217
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RING-type E3 ubiquitin transferase
Genome location	scaffold459:1295183..1295381
RNA-Seq Expression	MS013217
Synteny	MS013217
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140703.1 U-box domain-containing protein 26 [Cucumis sativus]

1.1e-13

69.12

Show/hide

Query:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR
        VV+ILRDPTAY   LKVGVKA F+LCL KQTRHKA+SA A EI+++RF D E+Y+ ER   TIELICR
Subjt:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR

XP_008456137.1 PREDICTED: U-box domain-containing protein 26-like [Cucumis melo]

1.1e-13

69.12

Show/hide

Query:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR
        VV+ILRDPTAY   LKVGVKA F+LCL KQTRHKA+SA A EI+++RF D E+Y+ ER   TIELICR
Subjt:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR

XP_022981075.1 U-box domain-containing protein 26-like [Cucurbita maxima]

1.4e-13

69.12

Show/hide

Query:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR
        VV+ILRDPTAY   +KVGVKA F+LCL KQTRHKA+SA A EIL++RF D E+Y+ ER   TIELICR
Subjt:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR

XP_038875248.1 U-box domain-containing protein 26-like isoform X1 [Benincasa hispida]

1.1e-13

69.12

Show/hide

Query:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR
        VV+ILRDPTAY   LKVGVKA F+LCL KQTRHKA+SA A EI+++RF D E+Y+ ER   TIELICR
Subjt:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR

XP_038875257.1 U-box domain-containing protein 26-like isoform X2 [Benincasa hispida]

1.1e-13

69.12

Show/hide

Query:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR
        VV+ILRDPTAY   LKVGVKA F+LCL KQTRHKA+SA A EI+++RF D E+Y+ ER   TIELICR
Subjt:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6F8 RING-type E3 ubiquitin transferase

5.3e-14

69.12

Show/hide

Query:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR
        VV+ILRDPTAY   LKVGVKA F+LCL KQTRHKA+SA A EI+++RF D E+Y+ ER   TIELICR
Subjt:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR

A0A1S3C380 RING-type E3 ubiquitin transferase

5.3e-14

69.12

Show/hide

Query:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR
        VV+ILRDPTAY   LKVGVKA F+LCL KQTRHKA+SA A EI+++RF D E+Y+ ER   TIELICR
Subjt:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR

A0A5A7T4S1 RING-type E3 ubiquitin transferase

5.3e-14

69.12

Show/hide

Query:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR
        VV+ILRDPTAY   LKVGVKA F+LCL KQTRHKA+SA A EI+++RF D E+Y+ ER   TIELICR
Subjt:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR

A0A6J1FSF9 RING-type E3 ubiquitin transferase

7.0e-14

69.12

Show/hide

Query:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR
        VV+ILRDPTAY   +KVGVKA F+LCL KQTRHKA+SA A EIL++RF D E+Y+ ER   TIELICR
Subjt:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR

A0A6J1IYF7 RING-type E3 ubiquitin transferase

7.0e-14

69.12

Show/hide

Query:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR
        VV+ILRDPTAY   +KVGVKA F+LCL KQTRHKA+SA A EIL++RF D E+Y+ ER   TIELICR
Subjt:  VVKILRDPTAYTH-LKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERT-TTIELICR

SwissProt top hits

e value

%identity

Alignment

Q9FXA4 U-box domain-containing protein 26

7.2e-08

49.28

Show/hide

Query:  VVKILRDP-TAYTHLKVGVKASFSLCLAKQTRHKAISARADEILVNRF-LDRERYNFER-TTTIELICR
        V+ +L++P ++   LK+G+KA F+LCL KQTRH AISA A  IL++R   D +R + ER   T+EL+CR
Subjt:  VVKILRDP-TAYTHLKVGVKASFSLCLAKQTRHKAISARADEILVNRF-LDRERYNFER-TTTIELICR

Q9LT79 U-box domain-containing protein 25

6.1e-07

46.38

Show/hide

Query:  VVKILRDP-TAYTHLKVGVKASFSLCLAKQTRHKAISARADEILVNRF-LDRERYNFERT-TTIELICR
        V+ +LR+P ++   LK+G+K  F+LC  K TRH AI+A A EIL++R   D +R + ER   T+EL+CR
Subjt:  VVKILRDP-TAYTHLKVGVKASFSLCLAKQTRHKAISARADEILVNRF-LDRERYNFERT-TTIELICR

Arabidopsis top hits

e value

%identity

Alignment

AT1G49780.1 plant U-box 26

5.1e-09

49.28

Show/hide

Query:  VVKILRDP-TAYTHLKVGVKASFSLCLAKQTRHKAISARADEILVNRF-LDRERYNFER-TTTIELICR
        V+ +L++P ++   LK+G+KA F+LCL KQTRH AISA A  IL++R   D +R + ER   T+EL+CR
Subjt:  VVKILRDP-TAYTHLKVGVKASFSLCLAKQTRHKAISARADEILVNRF-LDRERYNFER-TTTIELICR

AT3G19380.1 plant U-box 25

4.3e-08

46.38

Show/hide

Query:  VVKILRDP-TAYTHLKVGVKASFSLCLAKQTRHKAISARADEILVNRF-LDRERYNFERT-TTIELICR
        V+ +LR+P ++   LK+G+K  F+LC  K TRH AI+A A EIL++R   D +R + ER   T+EL+CR
Subjt:  VVKILRDP-TAYTHLKVGVKASFSLCLAKQTRHKAISARADEILVNRF-LDRERYNFERT-TTIELICR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

GTGGTCAAAATTCTCAGAGATCCAACGGCATACACTCACCTCAAGGTTGGAGTTAAGGCCTCGTTCTCTCTCTGTTTGGCGAAGCAGACGAGGCATAAGGCGATTTCTGC
CAGAGCCGATGAGATTCTTGTCAATCGATTCCTCGATCGGGAGAGGTACAACTTTGAGCGGACAACGACTATCGAGCTCATTTGCCGA

mRNA sequence

Show/hide mRNA sequence

GTGGTCAAAATTCTCAGAGATCCAACGGCATACACTCACCTCAAGGTTGGAGTTAAGGCCTCGTTCTCTCTCTGTTTGGCGAAGCAGACGAGGCATAAGGCGATTTCTGC
CAGAGCCGATGAGATTCTTGTCAATCGATTCCTCGATCGGGAGAGGTACAACTTTGAGCGGACAACGACTATCGAGCTCATTTGCCGA

Protein sequence

Show/hide protein sequence

VVKILRDPTAYTHLKVGVKASFSLCLAKQTRHKAISARADEILVNRFLDRERYNFERTTTIELICR

MS013217 (gene) of Bitter gourd (TR) v1 genome