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MS013225 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013225
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlucose-repressible alcohol dehydrogenase transcriptional effector like
Genome locationscaffold459:1372139..1372324
RNA-Seq ExpressionMS013225
SyntenyMS013225
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5961406.1 hypothetical protein HYC85_002615 [Camellia sinensis]3.5e-1475.81Show/hide
Query:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF
        LERLVV+LK+KL +SLK+KKP+YDK+EKSESMRVEIRSRKA+KL+++T+KIADSP ++TYAF
Subjt:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF

KAG7036740.1 hypothetical protein SDJN02_00360, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-1580.95Show/hide
Query:  LERLVVSLKAKLIKSLKMKK--PNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYA
        ++RLVV+LKAK++KSLKMKK   +YDKMEKSESMRVEIRSRKAQKLIQ TMKIADSP++KTYA
Subjt:  LERLVVSLKAKLIKSLKMKK--PNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYA

PSS30558.1 Glucose-repressible alcohol dehydrogenase transcriptional effector like [Actinidia chinensis var. chinensis]1.0e-1382.26Show/hide
Query:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF
        LERLVVSLK KL +SLK+KKP YDK+EKSESMRVEIRSRKA+K+I++TMKIADSP TKTYAF
Subjt:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF

THG07542.1 hypothetical protein TEA_003531 [Camellia sinensis var. sinensis]3.5e-1475.81Show/hide
Query:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF
        LERLVV+LK+KL +SLK+KKP+YDK+EKSESMRVEIRSRKA+KL+++T+KIADSP ++TYAF
Subjt:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF

TKY50077.1 hypothetical protein E2542_SST27531 [Spatholobus suberectus]1.8e-1375.81Show/hide
Query:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF
        L RL+V+LK+K I+SLKMKKPNYDK+EKSESMRVEIRSRKA+KLI++T+K+ADSP +KT AF
Subjt:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF

TrEMBL top hitse value%identityAlignment
A0A2R6RKK6 Glucose-repressible alcohol dehydrogenase transcriptional effector like5.0e-1482.26Show/hide
Query:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF
        LERLVVSLK KL +SLK+KKP YDK+EKSESMRVEIRSRKA+K+I++TMKIADSP TKTYAF
Subjt:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF

A0A4S4DW15 RNase H domain-containing protein1.7e-1475.81Show/hide
Query:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF
        LERLVV+LK+KL +SLK+KKP+YDK+EKSESMRVEIRSRKA+KL+++T+KIADSP ++TYAF
Subjt:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF

A0A7J6E3S5 Uncharacterized protein1.5e-1379.03Show/hide
Query:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF
        LERLVVSLK K I+SLKM K  YDK+EKSESMRVEIRS+KA+KLI+ T+KIADSPTTK+YAF
Subjt:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF

A0A7J7IA61 Uncharacterized protein1.7e-1475.81Show/hide
Query:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF
        LERLVV+LK+KL +SLK+KKP+YDK+EKSESMRVEIRSRKA+KL+++T+KIADSP ++TYAF
Subjt:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF

A0A803QKF3 Uncharacterized protein1.5e-1379.03Show/hide
Query:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF
        LERLVVSLK K I+SLKM K  YDK+EKSESMRVEIRS+KA+KLI+ T+KIADSPTTK+YAF
Subjt:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19660.1 unknown protein3.2e-0545.76Show/hide
Query:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKT
        LE L+ ++K+K +  L+ KK  Y KM+KS S+RV IR +K + LI  T+K+AD P  +T
Subjt:  LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGGAGAGATTGGTGGTGAGTTTGAAAGCAAAACTCATAAAGTCATTGAAGATGAAGAAGCCAAATTATGATAAGATGGAGAAAAGTGAGAGCATGAGAGTTGAAATCAG
AAGCAGAAAGGCCCAAAAGCTCATCCAAGACACCATGAAAATTGCTGATTCTCCCACCACCAAAACTTATGCTTTT
mRNA sequenceShow/hide mRNA sequence
CTGGAGAGATTGGTGGTGAGTTTGAAAGCAAAACTCATAAAGTCATTGAAGATGAAGAAGCCAAATTATGATAAGATGGAGAAAAGTGAGAGCATGAGAGTTGAAATCAG
AAGCAGAAAGGCCCAAAAGCTCATCCAAGACACCATGAAAATTGCTGATTCTCCCACCACCAAAACTTATGCTTTT
Protein sequenceShow/hide protein sequence
LERLVVSLKAKLIKSLKMKKPNYDKMEKSESMRVEIRSRKAQKLIQDTMKIADSPTTKTYAF