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MS013228 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013228
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionconserved peptide upstream open reading frame 11
Genome locationscaffold459:1393635..1393808
RNA-Seq ExpressionMS013228
SyntenyMS013228
Gene Ontology termsGO:0006557 - S-adenosylmethioninamine biosynthetic process (biological process)
GO:0006597 - spermine biosynthetic process (biological process)
GO:0008295 - spermidine biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004014 - adenosylmethionine decarboxylase activity (molecular function)
InterPro domainsIPR012511 - S-adenosyl-l-methionine decarboxylase leader peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650573.1 hypothetical protein Csa_010068 [Cucumis sativus]1.7e-18100Show/hide
Query:  ANDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
        ANDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
Subjt:  ANDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
KAG6607040.1 Uridine kinase-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.3e-1798.08Show/hide
Query:  NDLMESKGGKKK-SSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
        NDLMESKGGKKK SSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
Subjt:  NDLMESKGGKKK-SSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
KAG7017910.1 hypothetical protein SDJN02_19776, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-1798.08Show/hide
Query:  ANDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
        ANDLMESKGGKKK SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
Subjt:  ANDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
KAG7036737.1 S-adenosylmethionine decarboxylase proenzyme, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-1796.3Show/hide
Query:  ANDLMESKGGKKK-SSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNV
        ANDLMESKGGKKK SSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN+
Subjt:  ANDLMESKGGKKK-SSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNV
TKY69456.1 S-adenosyl-l-methionine decarboxylase leader peptide [Spatholobus suberectus]7.1e-1796.08Show/hide
Query:  NDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
        N+LMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRP+GGIKKFRSAAYSN
Subjt:  NDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
TrEMBL top hitse value%identityAlignment
A0A059ADW4 Uncharacterized protein (Fragment)1.7e-1690.57Show/hide
Query:  NDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVC
        N+LMESKGGKKK   SSSSKSLFYEAPLGYSIED+RPHGGIKKFRSAAYSNVC
Subjt:  NDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVC
A0A0A0LAP2 Uncharacterized protein8.2e-19100Show/hide
Query:  ANDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
        ANDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
Subjt:  ANDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
A0A151QZ93 Uncharacterized protein (Fragment)8.5e-1692.31Show/hide
Query:  NDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNV
        N+LMESKGGKKK SSSSSSKSLFYEAPLGYSIED+RP+GGIKKFRSAAYSNV
Subjt:  NDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNV
A0A1R3J120 Adenosylmethionine decarboxylase2.2e-1690.74Show/hide
Query:  NDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVCS
        NDLMESKGGKKK   SSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN+ S
Subjt:  NDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVCS
A0A6A5NYN2 Uncharacterized protein3.8e-1692.16Show/hide
Query:  NDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
        NDLMESKGGKKKSSSSSS  SLFYEAPLGYSIEDVRP+GGI+KFRSAAYSN
Subjt:  NDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02468.1 conserved peptide upstream open reading frame 96.5e-1682.69Show/hide
Query:  LMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVCS
        +MESKGGKKKSSSSS   SLFYEAPLGYSIEDVRP+GGIKKF+S+ YSN CS
Subjt:  LMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVCS
AT3G25572.1 conserved peptide upstream open reading frame 111.3e-1683.67Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNV
        ME+KGGKKKSS+SSS  SLF+EAPL YSIEDVRP+GGIKKFRSAAYSN+
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNV
AT5G15948.1 conserved peptide upstream open reading frame 101.1e-1277.08Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
        MESK G KKSSS+S   SL YEAPLGYSIEDVRP GGIKKF+S+ YSN
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGAATGATTTAATGGAGTCTAAAGGTGGCAAGAAGAAGTCTAGTAGTAGTAGTAGTAGTAAATCCCTTTTCTACGAAGCTCCCCTCGGTTACAGCATTGAAGACGTCCG
ACCACACGGTGGAATCAAGAAGTTCAGATCTGCTGCTTACTCCAACGTATGTTCCTACTTTTTA
mRNA sequenceShow/hide mRNA sequence
GCGAATGATTTAATGGAGTCTAAAGGTGGCAAGAAGAAGTCTAGTAGTAGTAGTAGTAGTAAATCCCTTTTCTACGAAGCTCCCCTCGGTTACAGCATTGAAGACGTCCG
ACCACACGGTGGAATCAAGAAGTTCAGATCTGCTGCTTACTCCAACGTATGTTCCTACTTTTTA
Protein sequenceShow/hide protein sequence
ANDLMESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVCSYFL