; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013236 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013236
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiondormancy-associated protein homolog 4-like
Genome locationscaffold459:1464498..1464794
RNA-Seq ExpressionMS013236
SyntenyMS013236
Gene Ontology termsNA
InterPro domainsIPR008406 - Dormancy/auxin associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137069.1 dormancy-associated protein homolog 4-like [Momordica charantia]1.0e-2358.27Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM----------TISIPSPTTLSHTHD----------------SPPPPTPPPVTPRDDDIKRLI
        MSFLQ IWDETLAGP PDS LGRLRKYNSF+A RSPPM          +I IPSP TLSH+                  S P P+ PP TPR DD+KRL 
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM----------TISIPSPTTLSHTHD----------------SPPPPTPPPVTPRDDDIKRLI

Query:  TRRRSLDFP--RPLELPDRTTPSVYDW
        T+RRS+DFP  RPLE  + TTPSVYDW
Subjt:  TRRRSLDFP--RPLELPDRTTPSVYDW

XP_022148244.1 dormancy-associated protein homolog 4-like [Momordica charantia]3.2e-4998.99Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPPPVTPRDDDIKRLITRRRSLDFPRPLELPDRTTPSVYDW
        MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPMTISIPSPTTLSHTHDS PPPTPPPVTPRDDDIKRLITRRRSLDFPRPLELPDRTTPSVYDW
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPPPVTPRDDDIKRLITRRRSLDFPRPLELPDRTTPSVYDW

XP_022955440.1 dormancy-associated protein homolog 4-like [Cucurbita moschata]2.5e-2255Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPP--------PPTPPPVTPRDDDIKRLITRRRSLD
        MSFLQ +WD+TLAGP PDS L RLRKYNSF+A RSPPM            I IPSPT    +    P        PP+ PP TPR D +KRL TRRR++D
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPP--------PPTPPPVTPRDDDIKRLITRRRSLD

Query:  FP--RPLELPDRTTPSVYDW
        +P  RPLE P++T+PSVYDW
Subjt:  FP--RPLELPDRTTPSVYDW

XP_023527038.1 dormancy-associated protein homolog 4-like [Cucurbita pepo subsp. pepo]3.3e-2254.55Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPP--------PPTPPPVTPRDDDIKRLITRRRSLD
        MSFLQ +WD+TLAGP PDS L RLRKYNSF+A RSPPM            I IPSPT    +    P        PP+ PP TPR D +KRL TRRR++D
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPP--------PPTPPPVTPRDDDIKRLITRRRSLD

Query:  FP---RPLELPDRTTPSVYDW
        +P   RPLE P++T+PSVYDW
Subjt:  FP---RPLELPDRTTPSVYDW

XP_038878401.1 dormancy-associated protein homolog 4-like [Benincasa hispida]5.1e-2357.26Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPP------------PPTPPPVTPRDDDIKRLITRR
        MSFLQ +WDETLAGP PDS L RLRKYNSF+A RSPPM           +I IPSP TLS    S P            PP+ PP TPR DD+KRL  RR
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPP------------PPTPPPVTPRDDDIKRLITRR

Query:  RSLDFP--RPLELPDRTTPSVYDW
        RS+D+P  RPLE P++T+PSVYDW
Subjt:  RSLDFP--RPLELPDRTTPSVYDW

TrEMBL top hitse value%identityAlignment
A0A6J1C649 dormancy-associated protein homolog 4-like5.0e-2458.27Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM----------TISIPSPTTLSHTHD----------------SPPPPTPPPVTPRDDDIKRLI
        MSFLQ IWDETLAGP PDS LGRLRKYNSF+A RSPPM          +I IPSP TLSH+                  S P P+ PP TPR DD+KRL 
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM----------TISIPSPTTLSHTHD----------------SPPPPTPPPVTPRDDDIKRLI

Query:  TRRRSLDFP--RPLELPDRTTPSVYDW
        T+RRS+DFP  RPLE  + TTPSVYDW
Subjt:  TRRRSLDFP--RPLELPDRTTPSVYDW

A0A6J1D3F2 dormancy-associated protein homolog 4-like1.5e-4998.99Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPPPVTPRDDDIKRLITRRRSLDFPRPLELPDRTTPSVYDW
        MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPMTISIPSPTTLSHTHDS PPPTPPPVTPRDDDIKRLITRRRSLDFPRPLELPDRTTPSVYDW
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPPPVTPRDDDIKRLITRRRSLDFPRPLELPDRTTPSVYDW

A0A6J1GCS2 dormancy-associated protein homolog 4-like1.4e-2157.52Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPPPPTPPPVTPRDDDIKRLITRRRSLDFP--RPLE
        MSFL  +WDETLAGP PDS L RLRKYNSF+A RSPPM            I IPSPT   ++  +  PP  PP TPR DD+ RL  RRR++D+P  RPLE
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPPPPTPPPVTPRDDDIKRLITRRRSLDFP--RPLE

Query:  LPDRT-TPSVYDW
          D T TPSVYDW
Subjt:  LPDRT-TPSVYDW

A0A6J1GV52 dormancy-associated protein homolog 4-like1.2e-2255Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPP--------PPTPPPVTPRDDDIKRLITRRRSLD
        MSFLQ +WD+TLAGP PDS L RLRKYNSF+A RSPPM            I IPSPT    +    P        PP+ PP TPR D +KRL TRRR++D
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPP--------PPTPPPVTPRDDDIKRLITRRRSLD

Query:  FP--RPLELPDRTTPSVYDW
        +P  RPLE P++T+PSVYDW
Subjt:  FP--RPLELPDRTTPSVYDW

A0A6J1J079 dormancy-associated protein homolog 4-like2.7e-2254.55Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPP--------PPTPPPVTPRDDDIKRLITRRRSLD
        MSFLQ +WD+TLAGP PDS L RLRKYNSF+A RSPPM            I IPSPT    +    P        PP+ PP TPR D +KRL TRRR++D
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPM-----------TISIPSPTTLSHTHDSPP--------PPTPPPVTPRDDDIKRLITRRRSLD

Query:  FP---RPLELPDRTTPSVYDW
        +P   RPLE P +T+PSVYDW
Subjt:  FP---RPLELPDRTTPSVYDW

SwissProt top hitse value%identityAlignment
F4HV65 Dormancy-associated protein homolog 41.2e-0653.66Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPMTIS
        M FL  +WDET+AGP PD+ LG+LRK++S +  RS P ++S
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPMTIS

Q8LD26 Dormancy-associated protein homolog 37.2e-0448.39Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFA
        M  L ++WD+T+AGP P++ LG+LRK+++F+
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFA

Arabidopsis top hitse value%identityAlignment
AT1G28330.1 dormancy-associated protein-like 16.1e-0632.79Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKY---------------NSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPP--PVTPRDDDIKRLITRRRSLDFP
        M  L+ +WD+ +AGP PD  LGRLRK                +    HRS  M  ++           SP  PT P  P TPR D++ R +    S    
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKY---------------NSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPP--PVTPRDDDIKRLITRRRSLDFP

Query:  RPL--ELPDRTT----PSVYDW
        R +   + D+ T    PSVYDW
Subjt:  RPL--ELPDRTT----PSVYDW

AT1G28330.2 dormancy-associated protein-like 11.1e-0432.23Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKY---------------NSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPP--PVTPRDDDIKRLITRRRSLDFP
        M  L+ +WD+ +AGP PD  LGRLRK                +    HRS  M  ++           SP  PT P  P TPR D++ R +    S    
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKY---------------NSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPP--PVTPRDDDIKRLITRRRSLDFP

Query:  RPL--ELPDRTT----PSVYD
        R +   + D+ T    PSVYD
Subjt:  RPL--ELPDRTT----PSVYD

AT1G28330.3 dormancy-associated protein-like 11.1e-0432.23Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKY---------------NSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPP--PVTPRDDDIKRLITRRRSLDFP
        M  L+ +WD+ +AGP PD  LGRLRK                +    HRS  M  ++           SP  PT P  P TPR D++ R +    S    
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKY---------------NSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPP--PVTPRDDDIKRLITRRRSLDFP

Query:  RPL--ELPDRTT----PSVYD
        R +   + D+ T    PSVYD
Subjt:  RPL--ELPDRTT----PSVYD

AT1G28330.4 dormancy-associated protein-like 16.1e-0632.79Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKY---------------NSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPP--PVTPRDDDIKRLITRRRSLDFP
        M  L+ +WD+ +AGP PD  LGRLRK                +    HRS  M  ++           SP  PT P  P TPR D++ R +    S    
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKY---------------NSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPP--PVTPRDDDIKRLITRRRSLDFP

Query:  RPL--ELPDRTT----PSVYDW
        R +   + D+ T    PSVYDW
Subjt:  RPL--ELPDRTT----PSVYDW

AT1G54070.1 Dormancy/auxin associated family protein8.4e-0853.66Show/hide
Query:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPMTIS
        M FL  +WDET+AGP PD+ LG+LRK++S +  RS P ++S
Subjt:  MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPMTIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCCTCCAAAACATCTGGGACGAAACCCTTGCCGGTCCTCCGCCGGATTCCGCCCTGGGACGCCTTCGCAAGTACAATTCCTTCGCCGCCCACAGATCTCCGCC
GATGACGATCTCCATTCCTAGCCCTACTACCCTCTCTCACACTCATGACTCGCCGCCGCCGCCGACTCCACCGCCGGTGACGCCTCGAGACGACGATATCAAGAGACTAA
TCACGAGGAGAAGATCTCTTGATTTTCCTCGCCCCCTGGAACTCCCTGACCGAACAACCCCTTCCGTTTACGATTGG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCCTCCAAAACATCTGGGACGAAACCCTTGCCGGTCCTCCGCCGGATTCCGCCCTGGGACGCCTTCGCAAGTACAATTCCTTCGCCGCCCACAGATCTCCGCC
GATGACGATCTCCATTCCTAGCCCTACTACCCTCTCTCACACTCATGACTCGCCGCCGCCGCCGACTCCACCGCCGGTGACGCCTCGAGACGACGATATCAAGAGACTAA
TCACGAGGAGAAGATCTCTTGATTTTCCTCGCCCCCTGGAACTCCCTGACCGAACAACCCCTTCCGTTTACGATTGG
Protein sequenceShow/hide protein sequence
MSFLQNIWDETLAGPPPDSALGRLRKYNSFAAHRSPPMTISIPSPTTLSHTHDSPPPPTPPPVTPRDDDIKRLITRRRSLDFPRPLELPDRTTPSVYDW