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MS013248 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013248
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1677)
Genome locationscaffold459:1536192..1536539
RNA-Seq ExpressionMS013248
SyntenyMS013248
Gene Ontology termsNA
InterPro domainsIPR012876 - Protein of unknown function DUF1677, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053489.1 hypothetical protein E6C27_scaffold190G00380 [Cucumis melo var. makuwa]3.0e-3876.58Show/hide
Query:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAA-GPPPDPTPHLITAMTQILRRSLDSPTI
        M+VE AKCECCGLTEECT  YIE IRRRF GKWICGLCSEAVQDEILKS +LITT +A+A HMSF  KFAAA GPPPDPTPHLI+AM QILRRSLDSP  
Subjt:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAA-GPPPDPTPHLITAMTQILRRSLDSPTI

Query:  RRRSLAPSRTS
         R S A   T+
Subjt:  RRRSLAPSRTS

KGN58440.1 hypothetical protein Csa_001716 [Cucumis sativus]6.0e-3976.58Show/hide
Query:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAA-GPPPDPTPHLITAMTQILRRSLDSPTI
        M+VE AKCECCGLTEECT  YIE IRRRF GKWICGLCSEAVQDEILKS ++ITT +A+A HM+FR KFAAA GPPPDPTPHLITAM QILRRSLDSP  
Subjt:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAA-GPPPDPTPHLITAMTQILRRSLDSPTI

Query:  RRRSLAPSRTS
         R S A   T+
Subjt:  RRRSLAPSRTS

XP_022148132.1 uncharacterized protein LOC111016886 [Momordica charantia]9.8e-5899.14Show/hide
Query:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSPTIR
        MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLI AMTQILRRSLDSPTIR
Subjt:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSPTIR

Query:  RRSLAPSRTSFTSLSG
        RRSLAPSRTSFTSLSG
Subjt:  RRSLAPSRTSFTSLSG

XP_023523768.1 uncharacterized protein LOC111787904 [Cucurbita pepo subsp. pepo]1.4e-3575.86Show/hide
Query:  MEVE-LAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSG-QLITTAQAMANHMSFRSKFAA-AGPPPDPTPHLITAMTQILRRSLDSP
        MEVE  A CECCGL+EECT  YIE +RRRF GKWICGLCSEAVQDEILKS   LITT +AMA HMSF  KFAA AGPPPDPTPHLITAM QILRRSLDSP
Subjt:  MEVE-LAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSG-QLITTAQAMANHMSFRSKFAA-AGPPPDPTPHLITAMTQILRRSLDSP

Query:  TIRRRSLAPSRTSFTS
            R+L   RTS TS
Subjt:  TIRRRSLAPSRTSFTS

XP_038901315.1 uncharacterized protein LOC120088232 [Benincasa hispida]1.0e-3877.48Show/hide
Query:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAA-GPPPDPTPHLITAMTQILRRSLDSPTI
        MEVE AKCECCGLTEECT  YIE IRRRF GKWICGLCSEAVQDEILKS +LITT +A+A HMSF  KFAAA GPPPDPTPHLITAM QILRRSLDSP  
Subjt:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAA-GPPPDPTPHLITAMTQILRRSLDSPTI

Query:  RRRSLAPSRTS
         R + A   T+
Subjt:  RRRSLAPSRTS

TrEMBL top hitse value%identityAlignment
A0A0A0L915 Uncharacterized protein2.9e-3976.58Show/hide
Query:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAA-GPPPDPTPHLITAMTQILRRSLDSPTI
        M+VE AKCECCGLTEECT  YIE IRRRF GKWICGLCSEAVQDEILKS ++ITT +A+A HM+FR KFAAA GPPPDPTPHLITAM QILRRSLDSP  
Subjt:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAA-GPPPDPTPHLITAMTQILRRSLDSPTI

Query:  RRRSLAPSRTS
         R S A   T+
Subjt:  RRRSLAPSRTS

A0A4U5P828 Uncharacterized protein4.3e-3558.78Show/hide
Query:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSP---
        +EVE AKC+CCGLTEECT GYIER+R R+ GKWICGLC+EA++DEI+++ +LI+T +AMA HM+F  KF ++GPPPDPT HLI AM QILRRSLDSP   
Subjt:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSP---

Query:  ------------TIRRRSLAPSRTSFTSLSG
                     IR  +L  S + FT+LSG
Subjt:  ------------TIRRRSLAPSRTSFTSLSG

A0A5A7UJ52 Uncharacterized protein1.4e-3876.58Show/hide
Query:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAA-GPPPDPTPHLITAMTQILRRSLDSPTI
        M+VE AKCECCGLTEECT  YIE IRRRF GKWICGLCSEAVQDEILKS +LITT +A+A HMSF  KFAAA GPPPDPTPHLI+AM QILRRSLDSP  
Subjt:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAA-GPPPDPTPHLITAMTQILRRSLDSPTI

Query:  RRRSLAPSRTS
         R S A   T+
Subjt:  RRRSLAPSRTS

A0A6J1D487 uncharacterized protein LOC1110168864.7e-5899.14Show/hide
Query:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSPTIR
        MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLI AMTQILRRSLDSPTIR
Subjt:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSPTIR

Query:  RRSLAPSRTSFTSLSG
        RRSLAPSRTSFTSLSG
Subjt:  RRSLAPSRTSFTSLSG

A0A6M2EA23 Uncharacterized protein3.3e-3558.78Show/hide
Query:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSP---
        +EVE AKC+CCGLTEECT GYIER+R R+ GKWICGLC+EA++DEI+++ +LI+T +AMA HM+F  KF ++GPPPDPT HLI AM QILRRSLDSP   
Subjt:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSP---

Query:  ------------TIRRRSLAPSRTSFTSLSG
                     IR  +L  S + FT+LSG
Subjt:  ------------TIRRRSLAPSRTSFTSLSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54095.1 Protein of unknown function (DUF1677)7.3e-1951.04Show/hide
Query:  EVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSG---QLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSL
        EV  A+CECCG+ EE TAGYIE +R  +AGK+ICGLCSEAV+ EI + G   + I   +A+A HM F S+F A+   P PT   I A+ +I +R L
Subjt:  EVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSG---QLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSL

AT1G72510.1 Protein of unknown function (DUF1677)5.8e-3259Show/hide
Query:  EVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSPTIRR
        E +   C+CCGLTEECT  YIE +R R+ GKWICGLCSEAV+ E++++ +L+TT +AMA HM+  +KF ++ PPP+PT HLI+AM QILR+SLDSP + R
Subjt:  EVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSPTIRR

AT1G72510.2 Protein of unknown function (DUF1677)5.8e-3259Show/hide
Query:  EVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSPTIRR
        E +   C+CCGLTEECT  YIE +R R+ GKWICGLCSEAV+ E++++ +L+TT +AMA HM+  +KF ++ PPP+PT HLI+AM QILR+SLDSP + R
Subjt:  EVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSPTIRR

AT2G09970.1 Protein of unknown function (DUF1677)4.0e-2551.49Show/hide
Query:  EVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITT-AQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSPTIR
        E++   C+CCGLT+ECT  Y E IR R+ GKWI G CSEAV+ +++++ + +TT  +AMA HM+  +KF ++ PP + T HLI+AM QILR+SLDSP + 
Subjt:  EVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITT-AQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSPTIR

Query:  R
        R
Subjt:  R

AT4G14819.1 Protein of unknown function (DUF1677)4.3e-1948.91Show/hide
Query:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRR
        ME+E   CECCGL E+CT  YI +++  FAGKW+CGLCSEAV DE  +S +  T  +A+  HMSF  KF A     +P   +   M Q+LRR
Subjt:  MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTGAATTGGCGAAATGCGAGTGCTGTGGGTTGACGGAGGAGTGCACGGCGGGCTACATCGAGCGGATCCGCCGCCGATTCGCCGGAAAATGGATCTGCGGTCT
CTGCTCGGAGGCGGTTCAAGACGAGATTCTCAAGTCCGGCCAACTTATCACCACCGCCCAAGCCATGGCCAACCACATGAGCTTCCGCAGCAAATTCGCCGCCGCCGGAC
CGCCGCCGGACCCGACGCCCCATCTCATAACGGCGATGACGCAGATCCTCCGCCGTAGTCTGGACTCTCCGACAATCCGCCGCCGCTCTCTCGCTCCATCCCGCACCTCT
TTCACTTCTCTCTCTGGT
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTGAATTGGCGAAATGCGAGTGCTGTGGGTTGACGGAGGAGTGCACGGCGGGCTACATCGAGCGGATCCGCCGCCGATTCGCCGGAAAATGGATCTGCGGTCT
CTGCTCGGAGGCGGTTCAAGACGAGATTCTCAAGTCCGGCCAACTTATCACCACCGCCCAAGCCATGGCCAACCACATGAGCTTCCGCAGCAAATTCGCCGCCGCCGGAC
CGCCGCCGGACCCGACGCCCCATCTCATAACGGCGATGACGCAGATCCTCCGCCGTAGTCTGGACTCTCCGACAATCCGCCGCCGCTCTCTCGCTCCATCCCGCACCTCT
TTCACTTCTCTCTCTGGT
Protein sequenceShow/hide protein sequence
MEVELAKCECCGLTEECTAGYIERIRRRFAGKWICGLCSEAVQDEILKSGQLITTAQAMANHMSFRSKFAAAGPPPDPTPHLITAMTQILRRSLDSPTIRRRSLAPSRTS
FTSLSG