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MS013261 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013261
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein-like protein
Genome locationscaffold459:1655069..1655512
RNA-Seq ExpressionMS013261
SyntenyMS013261
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148109.1 uncharacterized protein LOC111016865 [Momordica charantia]4.0e-72100Show/hide
Query:  MGESPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLD
        MGESPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLD
Subjt:  MGESPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLD

Query:  SKPGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS
        SKPGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS
Subjt:  SKPGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS

XP_022955496.1 uncharacterized protein LOC111457504 [Cucurbita moschata]6.2e-5782.88Show/hide
Query:  SPPLPNSLPQANSTATPMSSS-GTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSK
        SP   NSLPQ N+TATPM+SS G QRRKLP+PQELVSHYESQGL SHDASIKVIEDLQNAL RI+SSGRGKKDKLLV+TS+KIDAT +R+AILDLKLDSK
Subjt:  SPPLPNSLPQANSTATPMSSS-GTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSK

Query:  PGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS
        PGYA+TFA+GLASGSVL G+G+VMPHVFGA+ANIWSSVS  TKHSS
Subjt:  PGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS

XP_022980748.1 uncharacterized protein LOC111480022 [Cucurbita maxima]1.5e-5884.14Show/hide
Query:  SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSKP
        SP   NSLPQ N+TATPM+SSG QRRKLP+PQELVSHYESQGL SHDASIKVIEDLQNAL RI+SSGRGKKDKLLV+TS+KIDAT +R+AILDLKLDSKP
Subjt:  SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSKP

Query:  GYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS
        GYA+TFA+GLASGSVL G+G+VMPHVFGALANIWSSVS  TKHSS
Subjt:  GYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS

XP_023527033.1 uncharacterized protein LOC111790380 [Cucurbita pepo subsp. pepo]4.0e-5682.88Show/hide
Query:  SPPLPNSLPQANSTATPMSSS-GTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSK
        SP   NSL Q N+TATPM+SS G QRRKLP+PQELVSHYESQGL SHDASIKVIEDLQNAL RI+SSGRGKKDKLLV+TS+KIDAT +R+AILDLKLDSK
Subjt:  SPPLPNSLPQANSTATPMSSS-GTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSK

Query:  PGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS
        PGYA+TFA+GLASGSVL G+G+VMPHVFGALANIWSSVS  TKHSS
Subjt:  PGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS

XP_038893730.1 uncharacterized protein LOC120082569 [Benincasa hispida]5.1e-5983.33Show/hide
Query:  MGE--SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLK
        MGE  S   PNSLPQ NSTA PM+SSGT+RRK P+PQEL+SHYESQGL SHDASIKVIEDLQNALFRI+SSGRGKKDKLLVETS+KIDAT +R+AILDLK
Subjt:  MGE--SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLK

Query:  LDSKPGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS
        LDSKPGYAE+FA+GLASGSVL G+G+VMPHVFGAL NIWSSVSN TKHSS
Subjt:  LDSKPGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS

TrEMBL top hitse value%identityAlignment
A0A1S4DV46 uncharacterized protein LOC1034875371.4e-5177.08Show/hide
Query:  SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSKP
        SP  PNSLPQA    +P   S   RRK P+PQEL+SHYESQG  SHDASIKVI+DLQNALF+I+SSGRGKKDKLL+ETS+KIDAT SR+A+LDLKLDSKP
Subjt:  SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSKP

Query:  GYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHS
        GYAETFA+GLASGSVL G+G+VMPHVFGAL NIWSSV+N TKHS
Subjt:  GYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHS

A0A5A7VAF7 Putative ribosomal-like protein1.4e-5177.08Show/hide
Query:  SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSKP
        SP  PNSLPQA    +P   S   RRK P+PQEL+SHYESQG  SHDASIKVI+DLQNALF+I+SSGRGKKDKLL+ETS+KIDAT SR+A+LDLKLDSKP
Subjt:  SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSKP

Query:  GYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHS
        GYAETFA+GLASGSVL G+G+VMPHVFGAL NIWSSV+N TKHS
Subjt:  GYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHS

A0A6J1D308 uncharacterized protein LOC1110168651.9e-72100Show/hide
Query:  MGESPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLD
        MGESPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLD
Subjt:  MGESPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLD

Query:  SKPGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS
        SKPGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS
Subjt:  SKPGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS

A0A6J1GTX5 uncharacterized protein LOC1114575043.0e-5782.88Show/hide
Query:  SPPLPNSLPQANSTATPMSSS-GTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSK
        SP   NSLPQ N+TATPM+SS G QRRKLP+PQELVSHYESQGL SHDASIKVIEDLQNAL RI+SSGRGKKDKLLV+TS+KIDAT +R+AILDLKLDSK
Subjt:  SPPLPNSLPQANSTATPMSSS-GTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSK

Query:  PGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS
        PGYA+TFA+GLASGSVL G+G+VMPHVFGA+ANIWSSVS  TKHSS
Subjt:  PGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS

A0A6J1J075 uncharacterized protein LOC1114800227.1e-5984.14Show/hide
Query:  SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSKP
        SP   NSLPQ N+TATPM+SSG QRRKLP+PQELVSHYESQGL SHDASIKVIEDLQNAL RI+SSGRGKKDKLLV+TS+KIDAT +R+AILDLKLDSKP
Subjt:  SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSKP

Query:  GYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS
        GYA+TFA+GLASGSVL G+G+VMPHVFGALANIWSSVS  TKHSS
Subjt:  GYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16790.1 ribosomal protein-related3.1e-3049.32Show/hide
Query:  ESPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGR--GKKDKLLVETSKKIDATISRVAILDLKLD
        + P  PN+  +  S     S      +K PTP EL+SHY+ +GL   +ASIKVIEDLQNAL R+VSS R    KDKL+ + ++KIDA   R+A++D KL+
Subjt:  ESPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGR--GKKDKLLVETSKKIDATISRVAILDLKLD

Query:  SKPGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS
        +KPGY ETFA+GLASG+ L G+ +V PHV   +  IWS+V   T  SS
Subjt:  SKPGYAETFAIGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAATCACCACCACTCCCAAATTCTCTCCCCCAAGCCAACAGCACTGCAACCCCCATGAGTTCTTCAGGAACCCAGAGGAGGAAGCTTCCTACTCCACAGGAACT
CGTATCCCACTACGAATCCCAAGGCCTTAATTCTCATGATGCTTCAATCAAGGTAATAGAGGACCTTCAGAATGCTCTCTTCAGGATCGTCTCCTCCGGCAGAGGCAAAA
AGGACAAGCTTCTGGTCGAGACCTCGAAAAAGATCGATGCCACTATTAGCCGTGTTGCCATTCTGGACCTCAAGTTGGACTCGAAGCCGGGCTACGCCGAGACTTTTGCT
ATAGGATTGGCTTCTGGGTCTGTTTTGAAAGGGGTTGGGAGTGTGATGCCGCATGTTTTTGGGGCTCTCGCCAATATTTGGAGCTCTGTCAGTAATGCTACGAAGCATTC
TTCT
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAATCACCACCACTCCCAAATTCTCTCCCCCAAGCCAACAGCACTGCAACCCCCATGAGTTCTTCAGGAACCCAGAGGAGGAAGCTTCCTACTCCACAGGAACT
CGTATCCCACTACGAATCCCAAGGCCTTAATTCTCATGATGCTTCAATCAAGGTAATAGAGGACCTTCAGAATGCTCTCTTCAGGATCGTCTCCTCCGGCAGAGGCAAAA
AGGACAAGCTTCTGGTCGAGACCTCGAAAAAGATCGATGCCACTATTAGCCGTGTTGCCATTCTGGACCTCAAGTTGGACTCGAAGCCGGGCTACGCCGAGACTTTTGCT
ATAGGATTGGCTTCTGGGTCTGTTTTGAAAGGGGTTGGGAGTGTGATGCCGCATGTTTTTGGGGCTCTCGCCAATATTTGGAGCTCTGTCAGTAATGCTACGAAGCATTC
TTCT
Protein sequenceShow/hide protein sequence
MGESPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIEDLQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSKPGYAETFA
IGLASGSVLKGVGSVMPHVFGALANIWSSVSNATKHSS