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MS013264 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013264
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontransportin-3 isoform X2
Genome locationscaffold459:1667508..1667673
RNA-Seq ExpressionMS013264
SyntenyMS013264
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017889.1 Transportin-3 [Cucurbita argyrosperma subsp. argyrosperma]5.9e-1365.15Show/hide
Query:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNM
        YL+P  VETLVPLWLKALGDA       KSCD++KTNYGHMQGKGG VLK     FA+GH N+ N+
Subjt:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNM

XP_022148142.1 transportin-3 isoform X1 [Momordica charantia]5.4e-1465.67Show/hide
Query:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT
        YL+P  VETLVPLWLKALGDA       KSCD++K NYGHMQGKGG VLK     FA+GH N+PN+T
Subjt:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT

XP_022148144.1 transportin-3 isoform X2 [Momordica charantia]5.4e-1465.67Show/hide
Query:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT
        YL+P  VETLVPLWLKALGDA       KSCD++K NYGHMQGKGG VLK     FA+GH N+PN+T
Subjt:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT

XP_022148146.1 transportin MOS14 isoform X3 [Momordica charantia]5.4e-1465.67Show/hide
Query:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT
        YL+P  VETLVPLWLKALGDA       KSCD++K NYGHMQGKGG VLK     FA+GH N+PN+T
Subjt:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT

XP_038891351.1 transportin-3 [Benincasa hispida]1.8e-1467.16Show/hide
Query:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT
        YL+P  VETLVPLWLKALGDA       KSCD+ KTNYGHMQGKGG VLK     FA+GH N+PN+T
Subjt:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT

TrEMBL top hitse value%identityAlignment
A0A6J1D347 transportin-3 isoform X22.6e-1465.67Show/hide
Query:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT
        YL+P  VETLVPLWLKALGDA       KSCD++K NYGHMQGKGG VLK     FA+GH N+PN+T
Subjt:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT

A0A6J1D496 transportin-3 isoform X12.6e-1465.67Show/hide
Query:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT
        YL+P  VETLVPLWLKALGDA       KSCD++K NYGHMQGKGG VLK     FA+GH N+PN+T
Subjt:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT

A0A6J1D4H9 transportin MOS14 isoform X32.6e-1465.67Show/hide
Query:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT
        YL+P  VETLVPLWLKALGDA       KSCD++K NYGHMQGKGG VLK     FA+GH N+PN+T
Subjt:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNMT

A0A6J1F1T5 transportin-3 isoform X13.8e-1365.15Show/hide
Query:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNM
        YL+P  VETLVPLWLKALGDA       KSCD++KTNYGHMQGKGG VLK     FA+GH N+ N+
Subjt:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNM

A0A6J1J969 transportin-3 isoform X13.8e-1365.15Show/hide
Query:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNM
        YL+P  VETLVPLWLKALGDA       KSCD++KTNYGHMQGKGG VLK     FA+GH N+ N+
Subjt:  YLEPKGVETLVPLWLKALGDA-------KSCDKVKTNYGHMQGKGGIVLK-----FANGHCNVPNM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATTTAGAACCAAAGGGAGTAGAAACTCTTGTACCACTATGGTTAAAGGCACTCGGAGATGCTAAAAGTTGTGATAAAGTAAAGACTAATTATGGACATATGCAAGGCAA
GGGTGGAATAGTTTTAAAATTTGCTAATGGTCACTGCAATGTCCCAAATATGACT
mRNA sequenceShow/hide mRNA sequence
TATTTAGAACCAAAGGGAGTAGAAACTCTTGTACCACTATGGTTAAAGGCACTCGGAGATGCTAAAAGTTGTGATAAAGTAAAGACTAATTATGGACATATGCAAGGCAA
GGGTGGAATAGTTTTAAAATTTGCTAATGGTCACTGCAATGTCCCAAATATGACT
Protein sequenceShow/hide protein sequence
YLEPKGVETLVPLWLKALGDAKSCDKVKTNYGHMQGKGGIVLKFANGHCNVPNMT