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MS013278 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013278
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold459:1831432..1832025
RNA-Seq ExpressionMS013278
SyntenyMS013278
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588851.1 hypothetical protein SDJN03_17416, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6869.55Show/hide
Query:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKS-VSNFMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY
        VR+KRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLF+KS  S FMF       S  D+  G FG+QDYEFSCSNTPINPVFSH+SKRS KYHAY
Subjt:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKS-VSNFMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY

Query:  FPCINLPVEMETKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEK----------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDF
        FPCINLPVEMETKQQ+E+EEE+ +EE          AFT  PMTPE                  SPL+S F+VRISNYSSEEEN+ SSESGQVDNQAE+F
Subjt:  FPCINLPVEMETKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEK----------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDF

Query:  ITRFYEQLKMQRRLQLLQYT
        I RFYEQL+ QRRLQ LQY+
Subjt:  ITRFYEQLKMQRRLQLLQYT

XP_022148120.1 uncharacterized protein LOC111016873 [Momordica charantia]3.4e-10399.5Show/hide
Query:  MGVRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSNFMFSGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAYFPCINL
        MGVRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSNFMFSGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAYFPCINL
Subjt:  MGVRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSNFMFSGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAYFPCINL

Query:  PVEMETK-QQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKGSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYEQLKMQRRLQLLQYT
        PVEMETK QQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKGSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYEQLKMQRRLQLLQYT
Subjt:  PVEMETK-QQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKGSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYEQLKMQRRLQLLQYT

XP_022928225.1 uncharacterized protein LOC111435119 [Cucurbita moschata]3.6e-6869.82Show/hide
Query:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKS-VSNFMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY
        VR+KRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLF+KS  S FMF       +  D+  G FG+QDYEFSCSNTPIN VFSH+SKRS KYHAY
Subjt:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKS-VSNFMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY

Query:  FPCINLPVEMETKQQQEQEEED--GDEEAYAYLHPQPKAFTFQPMTPEK----------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQAE
        FPCINLPVEMETKQQ+E+EEE+   D EA A       AFT  PMTPE                  SPL+SPF+VRISNYSSEEENE SSESGQVDNQAE
Subjt:  FPCINLPVEMETKQQQEQEEED--GDEEAYAYLHPQPKAFTFQPMTPEK----------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQAE

Query:  DFITRFYEQLKMQRRLQLLQYT
        +FI RFYEQL+ QRRLQ LQY+
Subjt:  DFITRFYEQLKMQRRLQLLQYT

XP_022989722.1 uncharacterized protein LOC111486722 [Cucurbita maxima]6.5e-7071.36Show/hide
Query:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKS-VSNFMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY
        VR+KRLWNVLKVTLILMARKGLISKRRFIMDMNLM+KRGKLF+KS  S FMF       S  D+  G FG+QDYEFSCSNTPINPVFSH+SKRS KYHAY
Subjt:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKS-VSNFMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY

Query:  FPCINLPVEMETKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEK----------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDF
        FPCINLPVEMETK QQE+EEE  D EA+A       AFT  PMTPE                  SPL+SPF+VRISNYSSEEENE SSESGQVDNQAE+F
Subjt:  FPCINLPVEMETKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEK----------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDF

Query:  ITRFYEQLKMQRRLQLLQYT
        I RFYEQL+ QRRLQLLQY+
Subjt:  ITRFYEQLKMQRRLQLLQYT

XP_038887134.1 uncharacterized protein LOC120077324 [Benincasa hispida]4.5e-7169.06Show/hide
Query:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSN-FMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY
        VR+KRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLF+KSV+N FMF       +GRD+  GSFG+QDYEFSCSNTPINPVFSH SKR TKYH Y
Subjt:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSN-FMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY

Query:  FPCINLPVEMETKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEK--------------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQ
        FPCINLPVE+ET++QQE+EE++ +E++Y    P+ KA  +  MTPE                      SPL+SPF+VRISNYSSEE+NE S ESGQVDNQ
Subjt:  FPCINLPVEMETKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEK--------------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQ

Query:  AEDFITRFYEQLKMQRRLQLLQY
        AE+FI RFYEQLKMQRRLQLLQY
Subjt:  AEDFITRFYEQLKMQRRLQLLQY

TrEMBL top hitse value%identityAlignment
A0A0A0L6S8 Uncharacterized protein2.1e-6668.04Show/hide
Query:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSN-FMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY
        VR+KRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLF+KSV+N FMF       S RD+  G FG+QDYEFSCSNTPIN VFSH+SKR+TKY AY
Subjt:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSN-FMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY

Query:  FPCINLPVEMETKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKG-------------SPLL---SPFSVRISNYSSEEENECSSESGQVDNQAEDF
        FPCINLPVE+ET+++Q+ E+E+ +E++Y     + KA ++  MTPE               SP +   SPF+VRISNYSSEEENE SSESGQVDNQAE+F
Subjt:  FPCINLPVEMETKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKG-------------SPLL---SPFSVRISNYSSEEENECSSESGQVDNQAEDF

Query:  ITRFYEQLKMQRRLQLLQY
        I RFYEQLKMQ+RLQLLQY
Subjt:  ITRFYEQLKMQRRLQLLQY

A0A5D3DYM4 Uncharacterized protein6.2e-6668.78Show/hide
Query:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSN-FMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY
        VR+KRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGK+F+KSV+N FMF       S RD+  G FG+QDYEFSCSNTPIN VFSH+SKRSTKY  Y
Subjt:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSN-FMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY

Query:  FPCINLPVEMET-KQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKG--------------SPLL---SPFSVRISNYSSEEENECSSESGQVDNQAE
        FPCINLPVEMET +QQQ+ +EE+ +EE  +Y   + KA ++  MTPE                SP +   SPF+VRISNYSSEEENE SSESGQVDNQAE
Subjt:  FPCINLPVEMET-KQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKG--------------SPLL---SPFSVRISNYSSEEENECSSESGQVDNQAE

Query:  DFITRFYEQLKMQRRLQLLQY
        +FI RFYEQLKMQ+RLQLLQY
Subjt:  DFITRFYEQLKMQRRLQLLQY

A0A6J1D219 uncharacterized protein LOC1110168731.7e-10399.5Show/hide
Query:  MGVRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSNFMFSGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAYFPCINL
        MGVRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSNFMFSGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAYFPCINL
Subjt:  MGVRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSNFMFSGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAYFPCINL

Query:  PVEMETK-QQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKGSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYEQLKMQRRLQLLQYT
        PVEMETK QQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKGSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYEQLKMQRRLQLLQYT
Subjt:  PVEMETK-QQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKGSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYEQLKMQRRLQLLQYT

A0A6J1ER45 uncharacterized protein LOC1114351191.7e-6869.82Show/hide
Query:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKS-VSNFMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY
        VR+KRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLF+KS  S FMF       +  D+  G FG+QDYEFSCSNTPIN VFSH+SKRS KYHAY
Subjt:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKS-VSNFMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY

Query:  FPCINLPVEMETKQQQEQEEED--GDEEAYAYLHPQPKAFTFQPMTPEK----------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQAE
        FPCINLPVEMETKQQ+E+EEE+   D EA A       AFT  PMTPE                  SPL+SPF+VRISNYSSEEENE SSESGQVDNQAE
Subjt:  FPCINLPVEMETKQQQEQEEED--GDEEAYAYLHPQPKAFTFQPMTPEK----------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQAE

Query:  DFITRFYEQLKMQRRLQLLQYT
        +FI RFYEQL+ QRRLQ LQY+
Subjt:  DFITRFYEQLKMQRRLQLLQYT

A0A6J1JGM3 uncharacterized protein LOC1114867223.2e-7071.36Show/hide
Query:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKS-VSNFMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY
        VR+KRLWNVLKVTLILMARKGLISKRRFIMDMNLM+KRGKLF+KS  S FMF       S  D+  G FG+QDYEFSCSNTPINPVFSH+SKRS KYHAY
Subjt:  VRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKS-VSNFMF-------SGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAY

Query:  FPCINLPVEMETKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEK----------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDF
        FPCINLPVEMETK QQE+EEE  D EA+A       AFT  PMTPE                  SPL+SPF+VRISNYSSEEENE SSESGQVDNQAE+F
Subjt:  FPCINLPVEMETKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEK----------------GSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDF

Query:  ITRFYEQLKMQRRLQLLQYT
        I RFYEQL+ QRRLQLLQY+
Subjt:  ITRFYEQLKMQRRLQLLQYT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52140.1 unknown protein8.1e-1030.77Show/hide
Query:  SKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSNFMFSGRDVAHG--------------SFGLQDYEFSCSNTP--INPVFSHVSKRS
        SK+LWN+++  L+ M RKG +SK + I D N  +KRGK       N MF  R   H               +   Q+YEFSCSNTP    P  +    R 
Subjt:  SKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSNFMFSGRDVAHG--------------SFGLQDYEFSCSNTP--INPVFSHVSKRS

Query:  TKYHAYFPCINLPVEME---TKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKG-SPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYE
          ++  F C   P  ++      +   E  +G  E    + P        P  P  G +PL+ P  V  S +    EN     +G VD  A+DFI +FY+
Subjt:  TKYHAYFPCINLPVEME---TKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKG-SPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYE

Query:  QLKMQRRL
         L  Q+++
Subjt:  QLKMQRRL

AT3G16330.1 unknown protein4.9e-0727.8Show/hide
Query:  SKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSNFMFSGRDVAHG----SFGLQDYEFSCSNTP--INPVFSHVSKRSTKYHAYFPCI
        SK+L N+++  L  M  KG ISK++ + D N  +KRGK       N MF  R    G    S    +YEFSCS+TP    P      K+ + +++ F C 
Subjt:  SKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSNFMFSGRDVAHG----SFGLQDYEFSCSNTP--INPVFSHVSKRSTKYHAYFPCI

Query:  NLPVEME-----TKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMT------PEKGSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYEQLK
          P  ++     ++   E     GD +  +       AF+ + +T      P  G    S   +R+++       E    +G VD  A++FI +FY+ L 
Subjt:  NLPVEME-----TKQQQEQEEEDGDEEAYAYLHPQPKAFTFQPMT------PEKGSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYEQLK

Query:  MQRRL
         Q+++
Subjt:  MQRRL

AT5G38700.1 unknown protein2.1e-0529.95Show/hide
Query:  SKRLWNVLKVTLILMARKGLISKRRFIMDM-NLMVKRGKLFK--KSVSNFMFSGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAYFPCINLP
        ++R W+++++ L L  RKG I KR  + ++ NL  K  K      SV N  +  R      +G  + + S   TPI  V  H   R T      PCI  P
Subjt:  SKRLWNVLKVTLILMARKGLISKRRFIMDM-NLMVKRGKLFK--KSVSNFMFSGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAYFPCINLP

Query:  VEMETKQQQEQEEEDGDE-EAYAYLHPQPKAFTFQPMTPEKGSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYEQLKMQRRLQLLQY
         + +   + +  ++D D+  +Y Y         +     EK          R +N   EEE E       VD +AE+FI +FYEQ+K+QR++  LQY
Subjt:  VEMETKQQQEQEEEDGDE-EAYAYLHPQPKAFTFQPMTPEKGSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYEQLKMQRRLQLLQY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTGAGATCCAAGAGGCTTTGGAATGTTCTCAAGGTGACCCTGATTCTAATGGCAAGAAAAGGTCTAATCTCCAAGCGAAGGTTCATCATGGACATGAATTTGAT
GGTCAAGAGAGGGAAGCTGTTCAAAAAATCTGTGTCCAACTTCATGTTCAGCGGCAGAGATGTGGCACATGGCAGTTTCGGCCTACAGGATTATGAATTCTCCTGCAGCA
ACACTCCCATTAATCCTGTTTTTTCCCATGTGTCAAAGCGCAGCACCAAATACCACGCTTACTTCCCCTGTATCAATCTTCCTGTGGAAATGGAAACAAAGCAGCAGCAA
GAACAAGAAGAAGAAGATGGAGATGAAGAGGCCTACGCCTACCTACACCCACAACCCAAAGCCTTTACTTTCCAACCCATGACTCCCGAGAAAGGAAGCCCACTCCTTTC
CCCATTCTCTGTACGAATATCCAACTATTCCTCTGAGGAGGAAAATGAATGTAGCAGTGAAAGTGGACAAGTGGACAATCAGGCTGAGGACTTCATCACAAGGTTCTATG
AACAGCTAAAGATGCAACGACGCCTGCAACTACTGCAATATACT
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTGAGATCCAAGAGGCTTTGGAATGTTCTCAAGGTGACCCTGATTCTAATGGCAAGAAAAGGTCTAATCTCCAAGCGAAGGTTCATCATGGACATGAATTTGAT
GGTCAAGAGAGGGAAGCTGTTCAAAAAATCTGTGTCCAACTTCATGTTCAGCGGCAGAGATGTGGCACATGGCAGTTTCGGCCTACAGGATTATGAATTCTCCTGCAGCA
ACACTCCCATTAATCCTGTTTTTTCCCATGTGTCAAAGCGCAGCACCAAATACCACGCTTACTTCCCCTGTATCAATCTTCCTGTGGAAATGGAAACAAAGCAGCAGCAA
GAACAAGAAGAAGAAGATGGAGATGAAGAGGCCTACGCCTACCTACACCCACAACCCAAAGCCTTTACTTTCCAACCCATGACTCCCGAGAAAGGAAGCCCACTCCTTTC
CCCATTCTCTGTACGAATATCCAACTATTCCTCTGAGGAGGAAAATGAATGTAGCAGTGAAAGTGGACAAGTGGACAATCAGGCTGAGGACTTCATCACAAGGTTCTATG
AACAGCTAAAGATGCAACGACGCCTGCAACTACTGCAATATACT
Protein sequenceShow/hide protein sequence
MGVRSKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFKKSVSNFMFSGRDVAHGSFGLQDYEFSCSNTPINPVFSHVSKRSTKYHAYFPCINLPVEMETKQQQ
EQEEEDGDEEAYAYLHPQPKAFTFQPMTPEKGSPLLSPFSVRISNYSSEEENECSSESGQVDNQAEDFITRFYEQLKMQRRLQLLQYT