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MS013281 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013281
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlipid transfer-like protein VAS
Genome locationscaffold459:1845182..1845475
RNA-Seq ExpressionMS013281
SyntenyMS013281
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
IPR043325 - Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581146.1 Lipid transfer-like protein VAS, partial [Cucurbita argyrosperma subsp. sororia]3.9e-3168.04Show/hide
Query:  IATAMLLLVFEGYA---QEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        I TAMLL++    A   + Q+T C+NRLIPCL+YLNGTRDPP SCC+PL+ VI+SNPDC+C+LIS +GS+RAEQ GIDV++AQ LPGRCG+HVNPLS
Subjt:  IATAMLLLVFEGYA---QEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS

KAG7017881.1 Lipid transfer-like protein VAS, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-3168.04Show/hide
Query:  IATAMLLLVFEGYA---QEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        I TAMLL++    A   + Q+T C+NRLIPCL+YLNGTRDPP SCC+PL+ VI+SNPDC+C+LIS +GS+RAEQ GIDV++AQ LPGRCG+HVNPLS
Subjt:  IATAMLLLVFEGYA---QEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS

XP_022148259.1 lipid transfer-like protein VAS [Momordica charantia]5.9e-4896.94Show/hide
Query:  AAIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        AAIAIATAMLLLVFEGYAQEQ+TRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDC+CSLISMEGSNRAEQ GIDVNEAQQLPGRCGQHVNPLS
Subjt:  AAIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS

XP_022935175.1 lipid transfer-like protein VAS [Cucurbita moschata]6.6e-3168.42Show/hide
Query:  TAMLLLVFEGYA---QEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        TAMLL++    A   + Q+T C+NRLIPCL+YLNGTRDPP SCC+PL+ VI+SNPDC+C+LIS +GS+RAEQ GIDV++AQ LPGRCG+HVNPLS
Subjt:  TAMLLLVFEGYA---QEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS

XP_038901700.1 non-specific lipid transfer protein GPI-anchored 30 [Benincasa hispida]3.0e-3166.33Show/hide
Query:  AAIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        A + +  A++     G AQ Q+T CVNRLIPCL+YLNGT DPPESCC+PLR +I+SNPDC+C LIS EGSNRAE  GID+N+AQ LP RCG+HVNPLS
Subjt:  AAIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS

TrEMBL top hitse value%identityAlignment
A0A0A0L9L7 AAI domain-containing protein7.1e-3166Show/hide
Query:  IAIATAMLLLVFEG----YAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        +A A  M+LL   G     AQ ++T CVN LIPCL+Y+NGTRDPPESCC+PLR +I SNP+C+C LIS EGSNRAE  GID+NEAQ LP RCG+HVNPLS
Subjt:  IAIATAMLLLVFEG----YAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS

A0A5A7U4K4 Lipid transfer-like protein VAS2.7e-3065.66Show/hide
Query:  AIATAMLLLVFEG----YAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        A A  M+LL   G     AQ ++T CVN L+PCL+Y+NGTRDPPESCC PLR +I SNP+C+C LIS EGSNRAE  GID+NEAQ LP RCG+HVNPLS
Subjt:  AIATAMLLLVFEG----YAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS

A0A6J1D3G9 lipid transfer-like protein VAS2.9e-4896.94Show/hide
Query:  AAIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        AAIAIATAMLLLVFEGYAQEQ+TRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDC+CSLISMEGSNRAEQ GIDVNEAQQLPGRCGQHVNPLS
Subjt:  AAIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS

A0A6J1F9V7 lipid transfer-like protein VAS3.2e-3168.42Show/hide
Query:  TAMLLLVFEGYA---QEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        TAMLL++    A   + Q+T C+NRLIPCL+YLNGTRDPP SCC+PL+ VI+SNPDC+C+LIS +GS+RAEQ GIDV++AQ LPGRCG+HVNPLS
Subjt:  TAMLLLVFEGYA---QEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS

A0A6J1J1M2 lipid transfer-like protein VAS4.2e-3168.42Show/hide
Query:  TAMLLLVFEG---YAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        TAMLL++       A+ Q+T C+NRLIPCL+YLNGTRDPP SCC+PL+ VI+SNPDC+C+LIS +GS+RAEQ GIDV++AQ LPGRCG+HVNPLS
Subjt:  TAMLLLVFEG---YAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS

SwissProt top hitse value%identityAlignment
Q1PFD8 Non-specific lipid transfer protein GPI-anchored 91.5e-0632.32Show/hide
Query:  AIAIATAMLLLVFEGYAQ---EQETRCVNRLIPCLSYLNGTR-DPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNP
        A+ +A  +L  V E  AQ    Q T C+ +L+PC  Y++     PP SCC P++ ++E +  C+C  I+       + + +    A  LP  CG  VNP
Subjt:  AIAIATAMLLLVFEGYAQ---EQETRCVNRLIPCLSYLNGTR-DPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNP

Q6NLF7 Non-specific lipid transfer protein GPI-anchored 79.0e-0732.58Show/hide
Query:  AIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRC
        A A+    LLLV      E +T CV++L+PC + LN T  P + CCD ++  +E    C+C++ +  G     Q  +   +A  L  RC
Subjt:  AIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRC

Q9FFY3 Non-specific lipid transfer protein GPI-anchored 302.8e-2456.41Show/hide
Query:  QETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        Q   C+N+L PCL+YLNGT++ P+ CC+PL+ VI +NP+C+C +IS   S++AE+ GIDVN+AQ LP RCG+HVNP++
Subjt:  QETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS

Q9LJ86 Non-specific lipid transfer protein GPI-anchored 55.1e-1039.76Show/hide
Query:  ETRCVNRLI---PCLSYLNG-TRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQ--LPGRCGQHVNPLS
        ++ C N LI   PCL+Y+ G +  P + CC+ L RV++S+PDC+C +++  GS    Q+GI+VN+ Q   LP  C     P+S
Subjt:  ETRCVNRLI---PCLSYLNG-TRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQ--LPGRCGQHVNPLS

Q9LZH5 Non-specific lipid transfer protein GPI-anchored 21.3e-0538.81Show/hide
Query:  CLSYL-----NGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQ--QLPGRCG
        CLSY+      G   P ++CC  L  ++ES+P C+C L+S    + A Q+GI +++A+  +LPG CG
Subjt:  CLSYL-----NGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQ--QLPGRCG

Arabidopsis top hitse value%identityAlignment
AT1G62790.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.4e-0832.58Show/hide
Query:  AIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRC
        A A+    LLLV      E +T CV++L+PC + LN T  P + CCD ++  +E    C+C++ +  G     Q  +   +A  L  RC
Subjt:  AIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRC

AT1G62790.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.4e-0832.58Show/hide
Query:  AIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRC
        A A+    LLLV      E +T CV++L+PC + LN T  P + CCD ++  +E    C+C++ +  G     Q  +   +A  L  RC
Subjt:  AIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRC

AT1G70250.1 receptor serine/threonine kinase, putative2.9e-0832.14Show/hide
Query:  AMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCG
        A+L+ V E    E +T CV++++PC  +LN T  P   CC+ ++  +E +  C+C++ +  G     Q  I  ++A  L  RCG
Subjt:  AMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCG

AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.6e-1139.76Show/hide
Query:  ETRCVNRLI---PCLSYLNG-TRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQ--LPGRCGQHVNPLS
        ++ C N LI   PCL+Y+ G +  P + CC+ L RV++S+PDC+C +++  GS    Q+GI+VN+ Q   LP  C     P+S
Subjt:  ETRCVNRLI---PCLSYLNG-TRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQ--LPGRCGQHVNPLS

AT5G13900.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.0e-2556.41Show/hide
Query:  QETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS
        Q   C+N+L PCL+YLNGT++ P+ CC+PL+ VI +NP+C+C +IS   S++AE+ GIDVN+AQ LP RCG+HVNP++
Subjt:  QETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGGCGATCGCAATCGCAACCGCAATGCTACTGCTGGTGTTTGAAGGATACGCTCAAGAACAAGAGACACGGTGCGTGAACAGGTTAATTCCCTGCTTAAGTTACCTCAA
CGGAACCCGAGACCCGCCGGAGAGTTGTTGTGATCCTCTGAGACGGGTGATCGAGTCGAATCCAGATTGCATTTGCAGTTTAATTAGCATGGAGGGAAGCAATCGAGCGG
AGCAGGTTGGCATTGATGTCAACGAGGCTCAACAGCTGCCTGGCAGATGTGGGCAACATGTCAATCCACTCTCC
mRNA sequenceShow/hide mRNA sequence
GCGGCGATCGCAATCGCAACCGCAATGCTACTGCTGGTGTTTGAAGGATACGCTCAAGAACAAGAGACACGGTGCGTGAACAGGTTAATTCCCTGCTTAAGTTACCTCAA
CGGAACCCGAGACCCGCCGGAGAGTTGTTGTGATCCTCTGAGACGGGTGATCGAGTCGAATCCAGATTGCATTTGCAGTTTAATTAGCATGGAGGGAAGCAATCGAGCGG
AGCAGGTTGGCATTGATGTCAACGAGGCTCAACAGCTGCCTGGCAGATGTGGGCAACATGTCAATCCACTCTCC
Protein sequenceShow/hide protein sequence
AAIAIATAMLLLVFEGYAQEQETRCVNRLIPCLSYLNGTRDPPESCCDPLRRVIESNPDCICSLISMEGSNRAEQVGIDVNEAQQLPGRCGQHVNPLS