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MS013288 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013288
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncystatin-1-like
Genome locationscaffold402:41032..41343
RNA-Seq ExpressionMS013288
SyntenyMS013288
Gene Ontology termsGO:0010466 - negative regulation of peptidase activity (biological process)
GO:0004869 - cysteine-type endopeptidase inhibitor activity (molecular function)
InterPro domainsIPR000010 - Cystatin domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583734.1 Cysteine proteinase inhibitor 1, partial [Cucurbita argyrosperma subsp. sororia]3.3e-0436.36Show/hide
Query:  EPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKDNNDAKVEYRTSVIIDRTMNIFIDNFHRIP
        +PIE+I DPK Q+LG+  V  HN Q  ++ +QFQ+V+ G  +IV G  Y+  LT ++     ++  Y T V  D      + NF+++P
Subjt:  EPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKDNNDAKVEYRTSVIIDRTMNIFIDNFHRIP

XP_022142678.1 cystatin-1-like [Momordica charantia]1.7e-2456.73Show/hide
Query:  LASGSAEKQLSRP-GLEPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKDNNDAKVEYRTSVIIDRTMNIFIDNF
        +A+   E+QLS P GL+P+ DISDPKYQ+L ++ VEIHNWQ G S+LQF E++CGWS IV GI Y+FCL ++DKDNN+A   Y+  V +D + NIFI++F
Subjt:  LASGSAEKQLSRP-GLEPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKDNNDAKVEYRTSVIIDRTMNIFIDNF

Query:  HRIP
        H +P
Subjt:  HRIP

XP_023520258.1 cysteine proteinase inhibitor 1-like [Cucurbita pepo subsp. pepo]1.9e-0434.62Show/hide
Query:  LASGSAEKQLSRPG-LEPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKDNNDAKVEYRTSVIIDRTMNIFIDNF
        L+  +A ++L   G  +PIE+I DPK Q+LG+  V  HN Q  ++ +QFQ+V+ G  +IV G  Y+  LT ++  ++     Y T V  D      + NF
Subjt:  LASGSAEKQLSRPG-LEPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKDNNDAKVEYRTSVIIDRTMNIFIDNF

Query:  HRIP
        +++P
Subjt:  HRIP

XP_023520817.1 cysteine proteinase inhibitor 1-like [Cucurbita pepo subsp. pepo]4.3e-0437.5Show/hide
Query:  EPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKDNNDAKVEYRTSVIIDRTMNIFIDNFHRIP
        +PIE+I DPK Q+LG+  V  HN Q  ++ LQFQ+V+ G  +IV G  Y   LT ++  ++     Y T V  D      + NF+ +P
Subjt:  EPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKDNNDAKVEYRTSVIIDRTMNIFIDNFHRIP

XP_042509152.1 multicystatin-like [Macadamia integrifolia]9.5e-0442.62Show/hide
Query:  GLEPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKD
        G +PI+D+++P  Q LGQ  V  HN Q+G+ H+ F+ V+ GW+++V G+ Y  CL +  KD
Subjt:  GLEPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKD

TrEMBL top hitse value%identityAlignment
A0A6J1CNV2 cystatin-1-like8.1e-2556.73Show/hide
Query:  LASGSAEKQLSRP-GLEPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKDNNDAKVEYRTSVIIDRTMNIFIDNF
        +A+   E+QLS P GL+P+ DISDPKYQ+L ++ VEIHNWQ G S+LQF E++CGWS IV GI Y+FCL ++DKDNN+A   Y+  V +D + NIFI++F
Subjt:  LASGSAEKQLSRP-GLEPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKDNNDAKVEYRTSVIIDRTMNIFIDNF

Query:  HRIP
        H +P
Subjt:  HRIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGCAAGTGGCAGTGCTGAGAAGCAATTATCTAGGCCTGGCCTGGAACCAATAGAGGACATAAGTGACCCAAAATACCAAACCCTGGGGCAACTGGTTGTGGAGATACA
CAATTGGCAAAATGGCCAGTCCCATCTGCAGTTCCAGGAAGTGATGTGTGGATGGTCAGAAATCGTGGGAGGAATACTCTATGAGTTTTGCTTAACAGTGGTCGATAAAG
ACAATAACGATGCAAAGGTTGAGTACAGGACCAGCGTGATTATAGACCGCACCATGAACATCTTCATCGACAACTTCCACCGCATCCCCAAT
mRNA sequenceShow/hide mRNA sequence
TTGGCAAGTGGCAGTGCTGAGAAGCAATTATCTAGGCCTGGCCTGGAACCAATAGAGGACATAAGTGACCCAAAATACCAAACCCTGGGGCAACTGGTTGTGGAGATACA
CAATTGGCAAAATGGCCAGTCCCATCTGCAGTTCCAGGAAGTGATGTGTGGATGGTCAGAAATCGTGGGAGGAATACTCTATGAGTTTTGCTTAACAGTGGTCGATAAAG
ACAATAACGATGCAAAGGTTGAGTACAGGACCAGCGTGATTATAGACCGCACCATGAACATCTTCATCGACAACTTCCACCGCATCCCCAAT
Protein sequenceShow/hide protein sequence
LASGSAEKQLSRPGLEPIEDISDPKYQTLGQLVVEIHNWQNGQSHLQFQEVMCGWSEIVGGILYEFCLTVVDKDNNDAKVEYRTSVIIDRTMNIFIDNFHRIPN