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MS013303 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013303
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold402:167335..167787
RNA-Seq ExpressionMS013303
SyntenyMS013303
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054321.1 uncharacterized protein E6C27_scaffold24G00430 [Cucumis melo var. makuwa]5.2e-4367.55Show/hide
Query:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
        G  I  WRR QWWRRE  EVKRE EASIEK+E+K E++SLEELLLASPG  SE+G GN G+FNVSRHGGFKRKVHP RI   SS+C+   G VGESVA  
Subjt:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ

Query:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS
        +  S   F ICR ESGKLKKKVSFRLPEVS+VIVI S E+  + DD NV S
Subjt:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS

TYK12357.1 uncharacterized protein E5676_scaffold302G001340 [Cucumis melo var. makuwa]5.2e-4367.55Show/hide
Query:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
        G  I  WRR QWWRRE  EVKRE EASIEK+E+K E++SLEELLLASPG  SE+G GN G+FNVSRHGGFKRKVHP RI   SS+C+   G VGESVA  
Subjt:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ

Query:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS
        +  S   F ICR ESGKLKKKVSFRLPEVS+VIVI S E+  + DD NV S
Subjt:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS

XP_008458958.1 PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo]5.2e-4367.55Show/hide
Query:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
        G  I  WRR QWWRRE  EVKRE EASIEK+E+K E++SLEELLLASPG  SE+G GN G+FNVSRHGGFKRKVHP RI   SS+C+   G VGESVA  
Subjt:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ

Query:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS
        +  S   F ICR ESGKLKKKVSFRLPEVS+VIVI S E+  + DD NV S
Subjt:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS

XP_008458959.1 PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo]5.2e-4367.55Show/hide
Query:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
        G  I  WRR QWWRRE  EVKRE EASIEK+E+K E++SLEELLLASPG  SE+G GN G+FNVSRHGGFKRKVHP RI   SS+C+   G VGESVA  
Subjt:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ

Query:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS
        +  S   F ICR ESGKLKKKVSFRLPEVS+VIVI S E+  + DD NV S
Subjt:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS

XP_022142601.1 uncharacterized protein LOC111012677 [Momordica charantia]3.9e-7598.68Show/hide
Query:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
        GRGISEWRRLQWWRREEIEVKREKEASIEKQE+KREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
Subjt:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ

Query:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS
        DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGAS DDANVAS
Subjt:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS

TrEMBL top hitse value%identityAlignment
A0A1S3CAA9 uncharacterized protein LOC103498217 isoform X32.5e-4367.55Show/hide
Query:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
        G  I  WRR QWWRRE  EVKRE EASIEK+E+K E++SLEELLLASPG  SE+G GN G+FNVSRHGGFKRKVHP RI   SS+C+   G VGESVA  
Subjt:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ

Query:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS
        +  S   F ICR ESGKLKKKVSFRLPEVS+VIVI S E+  + DD NV S
Subjt:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS

A0A1S4E301 uncharacterized protein LOC103498217 isoform X12.5e-4367.55Show/hide
Query:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
        G  I  WRR QWWRRE  EVKRE EASIEK+E+K E++SLEELLLASPG  SE+G GN G+FNVSRHGGFKRKVHP RI   SS+C+   G VGESVA  
Subjt:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ

Query:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS
        +  S   F ICR ESGKLKKKVSFRLPEVS+VIVI S E+  + DD NV S
Subjt:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS

A0A5A7ULA6 Uncharacterized protein2.5e-4367.55Show/hide
Query:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
        G  I  WRR QWWRRE  EVKRE EASIEK+E+K E++SLEELLLASPG  SE+G GN G+FNVSRHGGFKRKVHP RI   SS+C+   G VGESVA  
Subjt:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ

Query:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS
        +  S   F ICR ESGKLKKKVSFRLPEVS+VIVI S E+  + DD NV S
Subjt:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS

A0A5D3CKA0 Uncharacterized protein2.5e-4367.55Show/hide
Query:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
        G  I  WRR QWWRRE  EVKRE EASIEK+E+K E++SLEELLLASPG  SE+G GN G+FNVSRHGGFKRKVHP RI   SS+C+   G VGESVA  
Subjt:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ

Query:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS
        +  S   F ICR ESGKLKKKVSFRLPEVS+VIVI S E+  + DD NV S
Subjt:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS

A0A6J1CMN8 uncharacterized protein LOC1110126771.9e-7598.68Show/hide
Query:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
        GRGISEWRRLQWWRREEIEVKREKEASIEKQE+KREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ
Subjt:  GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQ

Query:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS
        DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGAS DDANVAS
Subjt:  DEFSGGSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCCGTGGAATATCCGAGTGGAGAAGGCTACAATGGTGGAGGAGAGAGGAAATCGAAGTGAAGAGAGAGAAAGAAGCGTCGATTGAGAAGCAGGAATCGAAGAGGGAGTA
CCTGTCTCTGGAGGAGTTGCTTTTGGCTTCTCCGGGACCGTCGTCGGAGCAAGGTTTCGGTAATGGCGGAAAGTTTAACGTATCGAGACATGGCGGATTCAAGAGAAAAG
TGCATCCAACGAGGATTTGTAATTCGTCTTCGATTTGTGAGAGATCGGGGGGTGCGGTCGGCGAATCGGTTGCAGATCAGGATGAGTTTTCTGGCGGCAGTTTTTCGATT
TGCAGAAGCGAAAGTGGGAAGTTGAAGAAGAAAGTGAGTTTCAGACTGCCGGAGGTGTCGGAGGTGATCGTAATTTACTCGCCGGAGGAAGGTGCGTCGACCGACGACGC
GAATGTTGCTTCG
mRNA sequenceShow/hide mRNA sequence
GGCCGTGGAATATCCGAGTGGAGAAGGCTACAATGGTGGAGGAGAGAGGAAATCGAAGTGAAGAGAGAGAAAGAAGCGTCGATTGAGAAGCAGGAATCGAAGAGGGAGTA
CCTGTCTCTGGAGGAGTTGCTTTTGGCTTCTCCGGGACCGTCGTCGGAGCAAGGTTTCGGTAATGGCGGAAAGTTTAACGTATCGAGACATGGCGGATTCAAGAGAAAAG
TGCATCCAACGAGGATTTGTAATTCGTCTTCGATTTGTGAGAGATCGGGGGGTGCGGTCGGCGAATCGGTTGCAGATCAGGATGAGTTTTCTGGCGGCAGTTTTTCGATT
TGCAGAAGCGAAAGTGGGAAGTTGAAGAAGAAAGTGAGTTTCAGACTGCCGGAGGTGTCGGAGGTGATCGTAATTTACTCGCCGGAGGAAGGTGCGTCGACCGACGACGC
GAATGTTGCTTCG
Protein sequenceShow/hide protein sequence
GRGISEWRRLQWWRREEIEVKREKEASIEKQESKREYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRICNSSSICERSGGAVGESVADQDEFSGGSFSI
CRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASTDDANVAS