; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013309 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013309
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold402:214454..215038
RNA-Seq ExpressionMS013309
SyntenyMS013309
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019402.1 hypothetical protein SDJN02_18363, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-6366.02Show/hide
Query:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR
        MKKLYRRRGTVHPSPP ISDHLSFLP AIL LAAALSP DR++LAYLISS         N S HR K      A+AK G DHPPVF+CDCFRCYTSYW+R
Subjt:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR

Query:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER
        WD+SPNRQ+IHEIIDAYEE LA+++  KNN+KERKKR+TGSG  S   P +G GSE   +    E R  E EAA     GGE+E EKGSVR IVS+IGE+
Subjt:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER

Query:  IWGAWN
        IWG WN
Subjt:  IWGAWN

XP_022927395.1 uncharacterized protein LOC111434229 [Cucurbita moschata]4.0e-6466.5Show/hide
Query:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR
        MKKLYRRRGTVHPSPP ISDHLSFLP AIL LAAALSP DR++LAYLISS         N SGHR K      A+AK G DHPPVF+CDCFRCYTSYW+R
Subjt:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR

Query:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER
        WD+SPNRQ+IHEIIDAYEE LA+++  KNN+KERKKR+TGSG  S   P +G GSE   +    E R  E EAA     GGE+E EKGSVR IVS+IGE+
Subjt:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER

Query:  IWGAWN
        IWG WN
Subjt:  IWGAWN

XP_023001610.1 uncharacterized protein LOC111495687 [Cucurbita maxima]4.5e-6365.05Show/hide
Query:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR
        M KLYRRRGTVHPSPP ISDHLSFLP AIL LAAALSP DR++LAYLISS         N SGHR K      A+AK G DHPP F+CDCFRCYTSYW+R
Subjt:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR

Query:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER
        WD+SPNRQ+IHEIIDAYEE LA+++  KNN+KERKKR+TGSG  SG   S+G+G  +    +  E R  E EAA + GGGGE+E EKG+VR IV +IGE+
Subjt:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER

Query:  IWGAWN
        IWG WN
Subjt:  IWGAWN

XP_023520004.1 uncharacterized protein LOC111783314 [Cucurbita pepo subsp. pepo]1.8e-6466.02Show/hide
Query:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR
        MKKLYRRRGTVHPSPP ISDHLSFLP AIL LAAALSP DR++LAYLISS         N SGHR K      A+A+ G DHPPVF+C+CFRCYTSYW+R
Subjt:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR

Query:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER
        WD+SPNRQ+IHEIIDAYEE LA+++  KN++KERKKR+TGSG  S   P +G GSE   +    E R  E EAA + GGGGE+E EKGSVR IVS+IGE+
Subjt:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER

Query:  IWGAWN
        IWG WN
Subjt:  IWGAWN

XP_038894832.1 uncharacterized protein LOC120083238 [Benincasa hispida]4.5e-6364.76Show/hide
Query:  FSPMKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK-------ASAKGGPDHPPVFNCDCFRCYTS
        +SPMKKLYR+RGTVHPSPP ISDHLSFLP AIL LAAALS  DR+VLAYLISS         N S HR K       A+AKGG DHPP F+CDCFRCYTS
Subjt:  FSPMKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK-------ASAKGGPDHPPVFNCDCFRCYTS

Query:  YWIRWDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSF
        YW+RWD+SPNRQLIHEIIDAYEE LA+++  KNN+KERKKR+      SGP    G G  +   + + E R  E EAA     GGE+ETEKGSVR+IVSF
Subjt:  YWIRWDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSF

Query:  IGERIWGAWN
        IGERIWG+WN
Subjt:  IGERIWGAWN

TrEMBL top hitse value%identityAlignment
A0A0A0LVV3 Uncharacterized protein8.8e-5762.2Show/hide
Query:  FSPMKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSY
        +SPMKKLYR+RGTVHPSP  ISDHLSFLP  IL LAAALS  DR+VLAYLISS         N S HR K      A+A GG DHPP F+C CF+CYTSY
Subjt:  FSPMKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSY

Query:  WIRWDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFI
        W+RWD+SPNRQLIHEIIDAYEE LA+++  KNN+KERKKR+   G  SGPG  EG GSEA   +++ E R  E E A     GGE+  EKG VR+IVS +
Subjt:  WIRWDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFI

Query:  GERIWGAWN
        GE+IWG+WN
Subjt:  GERIWGAWN

A0A5D3CKA3 Uncharacterized protein1.1e-5460.19Show/hide
Query:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISST--------NCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR
        MKKLYR+ GTVHPSPP ISDHLSFLP AIL L++ALS  DR+VLAYLISS         N S HR K      A+   G DHPP F+C CF+CYTSYW+R
Subjt:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISST--------NCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR

Query:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER
        WD+SPNRQLIHEIIDAYE+ LA+T+  KNN+KERKKR++ SG  SGPG  EG G+EA ++         E    TE   GGE+E EKG VR+IVS +GE+
Subjt:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER

Query:  IWGAWN
        IWG+WN
Subjt:  IWGAWN

A0A6J1ENT0 uncharacterized protein LOC1114342292.0e-6466.5Show/hide
Query:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR
        MKKLYRRRGTVHPSPP ISDHLSFLP AIL LAAALSP DR++LAYLISS         N SGHR K      A+AK G DHPPVF+CDCFRCYTSYW+R
Subjt:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR

Query:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER
        WD+SPNRQ+IHEIIDAYEE LA+++  KNN+KERKKR+TGSG  S   P +G GSE   +    E R  E EAA     GGE+E EKGSVR IVS+IGE+
Subjt:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER

Query:  IWGAWN
        IWG WN
Subjt:  IWGAWN

A0A6J1JYL3 uncharacterized protein LOC1114900458.2e-5560.68Show/hide
Query:  SPMKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISST--NCSGHRCKA---------SAKGGPDHPPVFNCDCFRCYTSYWIRW
        SPMKK YRRRGTVHPSPP ISDHLSFLPAAIL LAAAL+  DR+VLAYLISS   N SGHR K+         SAK G DHPP F+C CFRCYT YW+RW
Subjt:  SPMKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISST--NCSGHRCKA---------SAKGGPDHPPVFNCDCFRCYTSYWIRW

Query:  DASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATE--SGGGGEDETEKGSVRKIVSFIGE
        D+SPNR++IHEII+AYEE LA+T+T K N+KERKKR+               G E+  R  + + R  E+EAA +   GGGGE+  EKG+VRKIV FIGE
Subjt:  DASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATE--SGGGGEDETEKGSVRKIVSFIGE

Query:  RIWGAW
         IWG +
Subjt:  RIWGAW

A0A6J1KLN6 uncharacterized protein LOC1114956872.2e-6365.05Show/hide
Query:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR
        M KLYRRRGTVHPSPP ISDHLSFLP AIL LAAALSP DR++LAYLISS         N SGHR K      A+AK G DHPP F+CDCFRCYTSYW+R
Subjt:  MKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISS--------TNCSGHRCK------ASAKGGPDHPPVFNCDCFRCYTSYWIR

Query:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER
        WD+SPNRQ+IHEIIDAYEE LA+++  KNN+KERKKR+TGSG  SG   S+G+G  +    +  E R  E EAA + GGGGE+E EKG+VR IV +IGE+
Subjt:  WDASPNRQLIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGER

Query:  IWGAWN
        IWG WN
Subjt:  IWGAWN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12020.1 unknown protein2.8e-3946.9Show/hide
Query:  MKKLYRRRGTVHPSPPTI--SDH-LSFLPAAILALAAALSPGDRQVLAYLISSTNCSGHR--------CKASAKGGPD-HPPVFNCDCFRCYTSYWIRWD
        MKKLY R+GTVHPSPP I  +DH L+ LP AI +LAA LSP DR+VLAYLIS+ + SG R         KA  K   D H P+F+CDCF CYTSYW+RWD
Subjt:  MKKLYRRRGTVHPSPPTI--SDH-LSFLPAAILALAAALSPGDRQVLAYLISSTNCSGHR--------CKASAKGGPD-HPPVFNCDCFRCYTSYWIRWD

Query:  ASPNRQLIHEIIDAYEEGLAQTRTSKNN---RKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPE----PRPRETEAATESGG--GGED----------
        +SP+RQLIHEIIDA+E+ L + +  K N   +K+R+KRS  S           + SE  SR  +      P    +E   + GG  GG +          
Subjt:  ASPNRQLIHEIIDAYEEGLAQTRTSKNN---RKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPE----PRPRETEAATESGG--GGED----------

Query:  ----ETEKGSVRKIVSFIGERIWGAW
            E EKG+VR+ VSFIGE+++G W
Subjt:  ----ETEKGSVRKIVSFIGERIWGAW

AT1G24270.1 unknown protein3.8e-2043.7Show/hide
Query:  RRGTVHPSPPTIS-------DHLS---FLPAAILALAAALSPGDRQVLAYLI----SSTNCSGHRCKASAKGGPDHPPVFNCDCFRCYTSYWIRWDASPN
        ++G VHPSPP  S       D LS    L +AIL L + LS  D +VLAYLI    ++TN    + K S K      P+ +C CF CYTSYW +WD+S N
Subjt:  RRGTVHPSPPTIS-------DHLS---FLPAAILALAAALSPGDRQVLAYLI----SSTNCSGHRCKASAKGGPDHPPVFNCDCFRCYTSYWIRWDASPN

Query:  RQLIHEIIDAYEEGLAQ-----TRTSKNNRKERKK
        R+LI++II+A+E+ L +     + TSK N+K  KK
Subjt:  RQLIHEIIDAYEEGLAQ-----TRTSKNNRKERKK

AT1G62422.1 unknown protein5.9e-3751.76Show/hide
Query:  MKKLYRRRGTVHPSPP----TISDHLSFLPAAILALAAALSPGDRQVLAYLISSTNCSGHRCKASAKGGPD--HPPVFNCDCFRCYTSYWIRWDASPNRQ
        MKKL  R+GTVHPSPP    T    LS LP AIL+L AALS  DR+VLAYLIS++  S +R     K   D  H P+F CDCF CYTSYW+RWD SP RQ
Subjt:  MKKLYRRRGTVHPSPP----TISDHLSFLPAAILALAAALSPGDRQVLAYLISSTNCSGHRCKASAKGGPD--HPPVFNCDCFRCYTSYWIRWDASPNRQ

Query:  LIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNG--SEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGERIWGAW
        LIHEIIDAYE+ L      K  +K+R+KR   SG  SG   S G    SE  S S +      E +    + GG E E EKGSV K++SFIG+R  G W
Subjt:  LIHEIIDAYEEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNG--SEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGERIWGAW

AT5G13090.1 unknown protein2.2e-2035.23Show/hide
Query:  RRRGTVHPSPP---------TISDHLS-----------FLPAAILALAAALSPGDRQVLAYLIS---------STNCSGHRCKASAKGGPDH-PPVFNCD
        +++G V+PSPP         + S+HL+            LPA IL L + LS  +R+VLAYLI+         +++      K S K   +H PPVF+C+
Subjt:  RRRGTVHPSPP---------TISDHLS-----------FLPAAILALAAALSPGDRQVLAYLIS---------STNCSGHRCKASAKGGPDH-PPVFNCD

Query:  CFRCYTSYWIRWDASPNRQLIHEIIDAY-----EEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATES
        CF CYT+YW RWD+SPNR+LIHEII+A+     EE  A    SK  +K+ K     +  +S P     +  + +S+   P   P      +ES
Subjt:  CFRCYTSYWIRWDASPNRQLIHEIIDAY-----EEGLAQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTCTCCGATGAAGAAGCTCTACCGGAGGAGGGGAACCGTCCACCCCTCGCCGCCTACCATCTCCGACCACCTCTCCTTTCTCCCCGCCGCCATCCTCGCCCTCGCGGC
GGCGCTCTCGCCGGGCGACAGACAGGTCCTCGCTTACCTCATCTCCTCCACCAACTGCTCCGGCCACCGCTGCAAGGCTTCCGCAAAAGGCGGCCCCGACCACCCGCCGG
TGTTCAACTGCGACTGTTTCCGCTGCTACACCAGTTACTGGATCCGATGGGACGCGTCCCCGAATCGGCAACTGATACACGAAATCATCGACGCCTACGAAGAAGGCTTG
GCTCAGACCAGAACCAGCAAGAACAATAGGAAAGAGAGGAAGAAGAGAAGTACCGGATCCGGGTTCGAGTCCGGGCCCGGGCCGAGCGAGGGGAATGGATCCGAGGCTAA
TTCGAGATCAAGAGATCCGGAGCCGCGGCCGAGGGAGACGGAGGCGGCGACAGAGAGCGGCGGCGGCGGCGAGGATGAAACGGAGAAAGGATCGGTGAGGAAGATTGTGA
GTTTCATAGGGGAAAGAATCTGGGGAGCTTGGAAT
mRNA sequenceShow/hide mRNA sequence
TTTTCTCCGATGAAGAAGCTCTACCGGAGGAGGGGAACCGTCCACCCCTCGCCGCCTACCATCTCCGACCACCTCTCCTTTCTCCCCGCCGCCATCCTCGCCCTCGCGGC
GGCGCTCTCGCCGGGCGACAGACAGGTCCTCGCTTACCTCATCTCCTCCACCAACTGCTCCGGCCACCGCTGCAAGGCTTCCGCAAAAGGCGGCCCCGACCACCCGCCGG
TGTTCAACTGCGACTGTTTCCGCTGCTACACCAGTTACTGGATCCGATGGGACGCGTCCCCGAATCGGCAACTGATACACGAAATCATCGACGCCTACGAAGAAGGCTTG
GCTCAGACCAGAACCAGCAAGAACAATAGGAAAGAGAGGAAGAAGAGAAGTACCGGATCCGGGTTCGAGTCCGGGCCCGGGCCGAGCGAGGGGAATGGATCCGAGGCTAA
TTCGAGATCAAGAGATCCGGAGCCGCGGCCGAGGGAGACGGAGGCGGCGACAGAGAGCGGCGGCGGCGGCGAGGATGAAACGGAGAAAGGATCGGTGAGGAAGATTGTGA
GTTTCATAGGGGAAAGAATCTGGGGAGCTTGGAAT
Protein sequenceShow/hide protein sequence
FSPMKKLYRRRGTVHPSPPTISDHLSFLPAAILALAAALSPGDRQVLAYLISSTNCSGHRCKASAKGGPDHPPVFNCDCFRCYTSYWIRWDASPNRQLIHEIIDAYEEGL
AQTRTSKNNRKERKKRSTGSGFESGPGPSEGNGSEANSRSRDPEPRPRETEAATESGGGGEDETEKGSVRKIVSFIGERIWGAWN