| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_022142704.1 DNA-directed RNA polymerases II and IV subunit 5A [Momordica charantia] | 6.3e-108 | 100 | Show/hide |
Query: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022143609.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Momordica charantia] | 8.8e-102 | 92.72 | Show/hide |
Query: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL++EEITRLFRIRKTVLQMLKDR YFVGDFEI MSREQF++KYGE+MKRED+VINKA+RNDSSDQIY+FFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EISSKFHLEVFQEAEL+VNIKDHVL+PEHQLLT EEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022953770.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 1.4e-102 | 93.2 | Show/hide |
Query: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL++EEITRLFRIRKTVLQMLKDRGYFVGDFEI MSREQF++KYGESMKRED+VINKAKRNDSSDQIY+FFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EISSKFHLEVFQEAEL+VN+KDHVL+PEHQLLT EEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 1.8e-102 | 93.2 | Show/hide |
Query: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLA+EEITRLFR+RKTVLQMLKDRGYFVGDFE+ MSREQF+NKYGESMKRED+VINKAKRNDSSDQIYIFFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EIS+KFHLEVFQEAEL+VNIKDHVL+PEHQLL+ EEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022991826.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita maxima] | 1.0e-102 | 93.2 | Show/hide |
Query: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL++EEITRLFRIRKTVLQMLKDRGYFVGDFEI MSREQF++KYGESMKRED+VINKAKRNDSSDQIY+FFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EISSKFHLEVFQEAEL+VN+KDHVL+PEHQLLT EEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CLP6 DNA-directed RNA polymerases II and IV subunit 5A | 3.0e-108 | 100 | Show/hide |
Query: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1GQK9 DNA-directed RNA polymerases II and IV subunit 5A-like | 6.6e-103 | 93.2 | Show/hide |
Query: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL++EEITRLFRIRKTVLQMLKDRGYFVGDFEI MSREQF++KYGESMKRED+VINKAKRNDSSDQIY+FFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EISSKFHLEVFQEAEL+VN+KDHVL+PEHQLLT EEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1H699 DNA-directed RNA polymerases II and IV subunit 5A-like | 8.6e-103 | 93.2 | Show/hide |
Query: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLA+EEITRLFR+RKTVLQMLKDRGYFVGDFE+ MSREQF+NKYGESMKRED+VINKAKRNDSSDQIYIFFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EIS+KFHLEVFQEAEL+VNIKDHVL+PEHQLL+ EEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1JRV4 DNA-directed RNA polymerases II and IV subunit 5A-like | 5.0e-103 | 93.2 | Show/hide |
Query: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL++EEITRLFRIRKTVLQMLKDRGYFVGDFEI MSREQF++KYGESMKRED+VINKAKRNDSSDQIY+FFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EISSKFHLEVFQEAEL+VN+KDHVL+PEHQLLT EEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 8.6e-103 | 93.2 | Show/hide |
Query: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLA+EEITRLFR+RKTVLQMLKDRGYFVGDFE+ MSREQF+NKYGESMKRED+VINKAKRNDSSDQIYIFFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EIS+KFHLEVFQEAEL+VNIKDHVL+PEHQLL+ EEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.3e-57 | 54.03 | Show/hide |
Query: LADEEIT--RLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGE-----SMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENV
+AD+E+ RL+RIRKTVLQM+ DRGY V E+ E F+ +G+ R DL I A +D +DQ+++FFPE+ K+G+KT+K +M+ +N+
Subjt: LADEEIT--RLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGE-----SMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENV
Query: FRAILVVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSET
RAI+VVQ +TP A+ IG+++ K+ LE F EAELMVNI +H L+PEH ++T EEK LL RY +K++QLPRIQ DP+ARY+GL+RGQVVKIIRPSET
Subjt: FRAILVVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSET
Query: AGRYVTYRYVV
AGRY+TYR VV
Subjt: AGRYVTYRYVV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 5.9e-93 | 81.95 | Show/hide |
Query: VLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
+L +EE+ RL+RI+KT++QML+DRGYF+ D E+ M+++QF K+G++MKREDLV KAKRND+SDQ+YIFFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCI EISSKFHLEVFQEAE++VNIK+HVL+PEHQ+LTTEEKKTLLERYTVKETQLPRIQVTDPIARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 9.9e-56 | 51.46 | Show/hide |
Query: DEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGES-----MKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAI
+EE RL++IRKT++Q+ DRGY V E+ + E+FR ++G+ +R DL + A +D +DQ+++FFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: DEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGES-----MKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + EL++NI +H L+PEH ++T EE LL RY ++E QLPRIQ DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 1.7e-55 | 50.97 | Show/hide |
Query: DEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGES-----MKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAI
+EE RL++IRKT++Q+ DRGY V E+ + E+F+ ++G+ +R DL + A +D +DQ+++FFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: DEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGES-----MKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + EL++NI +H L+PEH ++T EE LL RY ++E+QLPRIQ DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.4e-57 | 54.5 | Show/hide |
Query: LADEEIT--RLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGE-----SMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENV
+AD+E+ RL+RIRKTVLQM+ DRGY V E+ E F+ +YG+ R DL I A +D +DQ+++FFPE+ K+G+KT+K +M+ +N+
Subjt: LADEEIT--RLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGE-----SMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENV
Query: FRAILVVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSET
RAI+VVQ +TP A+ IG+++ K+ LE F EAELMVNI +H L+PEH ++T EEK LL RY +K++QLPRIQ DP+ARY+GL+RGQVVKIIRPSET
Subjt: FRAILVVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSET
Query: AGRYVTYRYVV
AGRY+TYR VV
Subjt: AGRYVTYRYVV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 7.8e-32 | 39.5 | Show/hide |
Query: EITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTY-TNRMKSENVFRAILVVQQN
E + + R+T ++ML+DRGY V D +I +S +QFR YGE + L I+ R DSS +I + F V V M+ + + EN+ ILV+Q +
Subjt: EITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTY-TNRMKSENVFRAILVVQQN
Query: LTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV
+T A + S F +E+F+ +L+VN+ HVL P+HQ+L +EK++LL++++++E QLPR+ DPI RYYGL+ GQV+K+ E + +VTYR V
Subjt: LTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 4.2e-94 | 81.95 | Show/hide |
Query: VLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
+L +EE+ RL+RI+KT++QML+DRGYF+ D E+ M+++QF K+G++MKREDLV KAKRND+SDQ+YIFFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCI EISSKFHLEVFQEAE++VNIK+HVL+PEHQ+LTTEEKKTLLERYTVKETQLPRIQVTDPIARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 3.8e-26 | 33.83 | Show/hide |
Query: EITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
E R + R T +ML+DRGY V + E+ ++ +FR+ +GE + E L I R+D +I + F + + VK+++ ++ + + ILV+Q
Subjt: EITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
Query: LTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV
+ FA+ + + F +E F +L+VNI H+ P+ ++L EEK+ LL ++ +++ QLP +Q D RYYGLK+ QVVKI E G +VTYR +
Subjt: LTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV
Query: V
+
Subjt: V
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 2.3e-31 | 40.2 | Show/hide |
Query: LADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKT-YTNRMKSENVFRAILV
L+ EE R + R+ LQML+DRGY V D +I +S FR YGE + L I+ R+DS+ ++ I F V V +++ + + E + ILV
Subjt: LADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTMKT-YTNRMKSENVFRAILV
Query: VQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
+Q ++T A I S F +E+FQ +L+VNI H L P+HQ+L EEK TLL++++++E QLPRI D I RYYGL++GQVVK+ E +V
Subjt: VQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYV
+R V
Subjt: YRYV
|
|
| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 5.6e-46 | 46.12 | Show/hide |
Query: DEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESM---KREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTM-KTYTNRMKSENVFRAIL
D+EITR+F++R+TVLQML+DRGY + + ++ + RE+F ++ ++M +E L ++ K + +D+IY+F+PE KVGV + K +M+ + V R I+
Subjt: DEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESM---KREDLVINKAKRNDSSDQIYIFFPEEQKVGVKTM-KTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VV +T AR + E++ +EVF+EAEL+ NI +H L+ ++ +L + KK LL YTV++TQLPRI VTDP+ARYYGLKRGQVVKI R T+ Y
Subjt: VVQQNLTPFARTCIGEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTTEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
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