; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013356 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013356
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein PHLOEM PROTEIN 2-LIKE A9-like
Genome locationscaffold402:578251..579175
RNA-Seq ExpressionMS013356
SyntenyMS013356
Gene Ontology termsNA
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459054.1 PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]3.2e-6872.73Show/hide
Query:  MSTTGPHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVY
        M+TT PHR ADETA +K+  KG  ++YPRGFNITWGNDDRYW+I+N N P S  +AELKQVSWLEVTCSTDNVEVG+TY+VGFN++M+PDAFGW+GI+VY
Subjt:  MSTTGPHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVY

Query:  VMAKVGKSGKFMFKKVSLGDKQPNE-KLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI
        VMAKVGK GKF   KVSLG+  PNE  +TIP+EPLEI V  STPK+ RTIHLGLYEVW+ KWKGGL+IHDAFI K+
Subjt:  VMAKVGKSGKFMFKKVSLGDKQPNE-KLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI

XP_022142415.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]1.4e-8790.75Show/hide
Query:  TTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYVMA
        T GPHRVAD+TAI KDTKGN R YPRG NITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGK YKVGFNVSMKPDAFGWNGIEVYVMA
Subjt:  TTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYVMA

Query:  KVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKIG
        KVGKSGKFMFKKVSLGDK  N+ L IPEEPLEITVDASTPK+LRTIHLGLYEVWTQKWKGGL+IHDAF+Q IG
Subjt:  KVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKIG

XP_022142416.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]1.5e-9799.43Show/hide
Query:  MSTTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYV
        MSTTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVE+GKTYKVGFNVSMKPDAFGWNGIEVYV
Subjt:  MSTTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYV

Query:  MAKVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKIG
        MAKVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKIG
Subjt:  MAKVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKIG

XP_022994910.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]6.2e-6468.97Show/hide
Query:  MSTTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYV
        M  TGPH+VA+E A  K+ K    IYPRGFNITWGND RYW I N N  ++ S+AELKQVSWLEVTCSTDNVE+GK YKVGFNVS++PDAFGW G++VYV
Subjt:  MSTTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYV

Query:  MAKVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI
        MAKVGKSG F  KKVSLGD  PN+   IP+ PL I +D ST K+ R+IHLGLYEVW+ KWKGGL+IH+AFI+KI
Subjt:  MAKVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI

XP_038894850.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]4.3e-6571.35Show/hide
Query:  PHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYVMAKV
        PHR AD+TAI+KDT KG  +IYPRGFNITWGNDDRYW+I+N N P S  +AELKQVSWLEVTCSTDNV+ G  Y+VGFNV+M+ DAFGW+ I+VYVMAKV
Subjt:  PHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYVMAKV

Query:  GKSGKFMFKKVSLGDKQPNE-KLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI
        G+ GKFM  KVSLGD +PN+  +TIP++PL I+VD STP + +TIHLGLYEVW+ KWKGGL+IHDAFIQK+
Subjt:  GKSGKFMFKKVSLGDKQPNE-KLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI

TrEMBL top hitse value%identityAlignment
A0A1S3C9E6 protein PHLOEM PROTEIN 2-LIKE A9-like1.5e-6872.73Show/hide
Query:  MSTTGPHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVY
        M+TT PHR ADETA +K+  KG  ++YPRGFNITWGNDDRYW+I+N N P S  +AELKQVSWLEVTCSTDNVEVG+TY+VGFN++M+PDAFGW+GI+VY
Subjt:  MSTTGPHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVY

Query:  VMAKVGKSGKFMFKKVSLGDKQPNE-KLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI
        VMAKVGK GKF   KVSLG+  PNE  +TIP+EPLEI V  STPK+ RTIHLGLYEVW+ KWKGGL+IHDAFI K+
Subjt:  VMAKVGKSGKFMFKKVSLGDKQPNE-KLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI

A0A5A7TIU6 Protein PHLOEM PROTEIN 2-LIKE A9-like1.5e-6872.73Show/hide
Query:  MSTTGPHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVY
        M+TT PHR ADETA +K+  KG  ++YPRGFNITWGNDDRYW+I+N N P S  +AELKQVSWLEVTCSTDNVEVG+TY+VGFN++M+PDAFGW+GI+VY
Subjt:  MSTTGPHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVY

Query:  VMAKVGKSGKFMFKKVSLGDKQPNE-KLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI
        VMAKVGK GKF   KVSLG+  PNE  +TIP+EPLEI V  STPK+ RTIHLGLYEVW+ KWKGGL+IHDAFI K+
Subjt:  VMAKVGKSGKFMFKKVSLGDKQPNE-KLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI

A0A6J1CKW1 protein PHLOEM PROTEIN 2-LIKE A9-like6.6e-8890.75Show/hide
Query:  TTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYVMA
        T GPHRVAD+TAI KDTKGN R YPRG NITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGK YKVGFNVSMKPDAFGWNGIEVYVMA
Subjt:  TTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYVMA

Query:  KVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKIG
        KVGKSGKFMFKKVSLGDK  N+ L IPEEPLEITVDASTPK+LRTIHLGLYEVWTQKWKGGL+IHDAF+Q IG
Subjt:  KVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKIG

A0A6J1CM42 protein PHLOEM PROTEIN 2-LIKE A9-like7.1e-9899.43Show/hide
Query:  MSTTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYV
        MSTTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVE+GKTYKVGFNVSMKPDAFGWNGIEVYV
Subjt:  MSTTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYV

Query:  MAKVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKIG
        MAKVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKIG
Subjt:  MAKVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKIG

A0A6J1K2M8 protein PHLOEM PROTEIN 2-LIKE A9-like3.0e-6468.97Show/hide
Query:  MSTTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYV
        M  TGPH+VA+E A  K+ K    IYPRGFNITWGND RYW I N N  ++ S+AELKQVSWLEVTCSTDNVE+GK YKVGFNVS++PDAFGW G++VYV
Subjt:  MSTTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYV

Query:  MAKVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI
        MAKVGKSG F  KKVSLGD  PN+   IP+ PL I +D ST K+ R+IHLGLYEVW+ KWKGGL+IH+AFI+KI
Subjt:  MAKVGKSGKFMFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI

SwissProt top hitse value%identityAlignment
Q9SA16 Protein PHLOEM PROTEIN 2-LIKE A93.8e-3242.93Show/hide
Query:  STTGPHRVADETAIDKDTKGNARI-YPRGFNITWGNDDRYWHISNSNTPKSSSV-AELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVY
        S    H  AD + +++D    A I  P G N  WG D RYW I     PK   + AELK VSWLEVT S D +E GKTY++GF +S KPDA GW+   V+
Subjt:  STTGPHRVADETAIDKDTKGNARI-YPRGFNITWGNDDRYWHISNSNTPKSSSV-AELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVY

Query:  VMAKVGKSGKFMFKKVSLGD------KQPNEKLTIPEEP---LEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI
        + AK+GK GK ++K++          K  +E + IP+E     EI V  +   Q   +  GLYEVWT +WK GL IH+AF+Q++
Subjt:  VMAKVGKSGKFMFKKVSLGD------KQPNEKLTIPEEP---LEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI

Arabidopsis top hitse value%identityAlignment
AT1G10155.1 phloem protein 2-A103.1e-2940.57Show/hide
Query:  ETAIDKDTKGNARIY-PRGFNITWGNDDRYWHISNSN-TPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYVMAKVGKSGK
        E+ +++D    A ++ P G N  WG D RYW I N + TP     AELK+VSWLEVT S D +E GKTY++GF +S   DA GW+   V++ AK+GK G+
Subjt:  ETAIDKDTKGNARIY-PRGFNITWGNDDRYWHISNSN-TPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYVMAKVGKSGK

Query:  FMFKKVSLGD------KQPNEKLTIPEEP---LEITVDASTP-KQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI
         ++K++   +      K     + IP+E     EI V       Q   +  GLYEVWT KWK GL I++AF++++
Subjt:  FMFKKVSLGD------KQPNEKLTIPEEP---LEITVDASTP-KQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI

AT1G31200.1 phloem protein 2-A92.7e-3342.93Show/hide
Query:  STTGPHRVADETAIDKDTKGNARI-YPRGFNITWGNDDRYWHISNSNTPKSSSV-AELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVY
        S    H  AD + +++D    A I  P G N  WG D RYW I     PK   + AELK VSWLEVT S D +E GKTY++GF +S KPDA GW+   V+
Subjt:  STTGPHRVADETAIDKDTKGNARI-YPRGFNITWGNDDRYWHISNSNTPKSSSV-AELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVY

Query:  VMAKVGKSGKFMFKKVSLGD------KQPNEKLTIPEEP---LEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI
        + AK+GK GK ++K++          K  +E + IP+E     EI V  +   Q   +  GLYEVWT +WK GL IH+AF+Q++
Subjt:  VMAKVGKSGKFMFKKVSLGD------KQPNEKLTIPEEP---LEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI

AT1G80110.1 phloem protein 2-B114.5e-0446.15Show/hide
Query:  RGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVT
        R  NI WG++ RYWH  +    +   VAEL  V WLE+T
Subjt:  RGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACAACTGGGCCTCACAGAGTGGCAGATGAAACTGCCATAGACAAGGACACCAAGGGGAATGCCAGAATTTATCCAAGAGGGTTTAATATCACGTGGGGCAACGA
CGATCGCTATTGGCATATCTCTAACTCCAACACGCCAAAAAGTTCGTCGGTGGCGGAGCTGAAGCAAGTTTCATGGCTAGAAGTGACATGTTCAACAGACAATGTAGAGG
TTGGGAAGACGTACAAAGTGGGGTTCAATGTATCAATGAAACCAGATGCATTTGGATGGAATGGGATTGAGGTTTATGTAATGGCCAAGGTTGGGAAATCAGGAAAGTTC
ATGTTCAAGAAAGTTTCTTTAGGAGACAAACAACCAAATGAAAAGCTGACCATCCCTGAGGAGCCCTTAGAAATCACAGTTGATGCTTCAACGCCCAAACAGCTTAGGAC
CATCCATCTTGGTTTGTATGAAGTTTGGACTCAGAAGTGGAAGGGAGGATTGAAGATCCATGATGCATTCATTCAGAAGATTGGC
mRNA sequenceShow/hide mRNA sequence
ATGAGTACAACTGGGCCTCACAGAGTGGCAGATGAAACTGCCATAGACAAGGACACCAAGGGGAATGCCAGAATTTATCCAAGAGGGTTTAATATCACGTGGGGCAACGA
CGATCGCTATTGGCATATCTCTAACTCCAACACGCCAAAAAGTTCGTCGGTGGCGGAGCTGAAGCAAGTTTCATGGCTAGAAGTGACATGTTCAACAGACAATGTAGAGG
TTGGGAAGACGTACAAAGTGGGGTTCAATGTATCAATGAAACCAGATGCATTTGGATGGAATGGGATTGAGGTTTATGTAATGGCCAAGGTTGGGAAATCAGGAAAGTTC
ATGTTCAAGAAAGTTTCTTTAGGAGACAAACAACCAAATGAAAAGCTGACCATCCCTGAGGAGCCCTTAGAAATCACAGTTGATGCTTCAACGCCCAAACAGCTTAGGAC
CATCCATCTTGGTTTGTATGAAGTTTGGACTCAGAAGTGGAAGGGAGGATTGAAGATCCATGATGCATTCATTCAGAAGATTGGC
Protein sequenceShow/hide protein sequence
MSTTGPHRVADETAIDKDTKGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQVSWLEVTCSTDNVEVGKTYKVGFNVSMKPDAFGWNGIEVYVMAKVGKSGKF
MFKKVSLGDKQPNEKLTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKIG