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MS013387 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013387
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold402:878941..879423
RNA-Seq ExpressionMS013387
SyntenyMS013387
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043344.1 hypothetical protein E6C27_scaffold110G002580 [Cucumis melo var. makuwa]3.0e-5772.22Show/hide
Query:  IMPKAFSSFANFLTSDPSPFPSLLLLVLIFTIHGPTGRFFSYFLFA-RPALYYNCAGRYKVLCNPIANPSPRRLVCGGWALRAAPVALLVVVSWLTHKDS
        +M K + SF NFLTSDPSPFPSLLL++LIFT H P  RFFSY  F   P  YYNC G +K+LCNPI   SPRRL  GGWALRAAP+ALLVVVSWL+ K+S
Subjt:  IMPKAFSSFANFLTSDPSPFPSLLLLVLIFTIHGPTGRFFSYFLFA-RPALYYNCAGRYKVLCNPIANPSPRRLVCGGWALRAAPVALLVVVSWLTHKDS

Query:  AGVSARKLGCSGCRVPTIFEHKAEAGEIGGFTPWILVGMILLLFNMAQRQALIRHCLFVRSM
        AGV+ARK G  GC V TI EHKAE  EIGG TPW+LVG+I+LLFNMAQRQALIRHCLFVRSM
Subjt:  AGVSARKLGCSGCRVPTIFEHKAEAGEIGGFTPWILVGMILLLFNMAQRQALIRHCLFVRSM
KAE8653331.1 hypothetical protein Csa_023242 [Cucumis sativus]6.3e-5572.84Show/hide
Query:  IMPKAFSSFANFLTSDPSPFPSLLLLVLIFTIHGPTGRFFSYFLF-ARPALYYNCAGRYKVLCNPIANPSPRRLVCGGWALRAAPVALLVVVSWLTHKDS
        IM K  SSF +FLTSDPSPFPSLLLL+LIFT H    RFFSY  F   P  YYNC G +K+LCNPI   SPRRL  GGWALRAAP+ALLVVVSWL+ K+S
Subjt:  IMPKAFSSFANFLTSDPSPFPSLLLLVLIFTIHGPTGRFFSYFLF-ARPALYYNCAGRYKVLCNPIANPSPRRLVCGGWALRAAPVALLVVVSWLTHKDS

Query:  AGVSARKLGCSGCRVPTIFEHKAEAGEIGGFTPWILVGMILLLFNMAQRQALIRHCLFVRSM
        AGV+ARK    G RV TI EHKAE  EIGG TPW+LVGMI+LLFNMAQRQALIRHCLFVRSM
Subjt:  AGVSARKLGCSGCRVPTIFEHKAEAGEIGGFTPWILVGMILLLFNMAQRQALIRHCLFVRSM
KAG6573437.1 hypothetical protein SDJN03_27324, partial [Cucurbita argyrosperma subsp. sororia]2.8e-5571.43Show/hide
Query:  IMPKAFSSFANFLTSDPSPFPSLLLLVLIFTIHGPTGRFFSYFLFARPALYYNCAGRYKVLCNPIANPSPRRLVCGGWALRAAPVALLVVVSWLTHKDSA
        IMPK  SS  + LTSDPSPFPSLLLL+LIFT+H PT RFFSYFL A P+LYY+CAGR   LCNP+A  SP+RL CGGW+LR AP+ALLVVVSWLT KD+ 
Subjt:  IMPKAFSSFANFLTSDPSPFPSLLLLVLIFTIHGPTGRFFSYFLFARPALYYNCAGRYKVLCNPIANPSPRRLVCGGWALRAAPVALLVVVSWLTHKDSA

Query:  GVSARKLGCSGCRVPTIFE---HKAEAGEIGGFTPWILVGMILLLFNMAQRQALIRHCLFV
        GV+AR  G   C VPTI +   H+ EA  IGG TPW+LVGMILLLFNMAQRQALIRHCLFV
Subjt:  GVSARKLGCSGCRVPTIFE---HKAEAGEIGGFTPWILVGMILLLFNMAQRQALIRHCLFV
TrEMBL top hitse value%identityAlignment
A0A0A0LW23 Uncharacterized protein5.2e-5573.72Show/hide
Query:  SSFANFLTSDPSPFPSLLLLVLIFTIHGPTGRFFSYFLF-ARPALYYNCAGRYKVLCNPIANPSPRRLVCGGWALRAAPVALLVVVSWLTHKDSAGVSAR
        SSF +FLTSDPSPFPSLLLL+LIFT H    RFFSY  F   P  YYNC G +K+LCNPI   SPRRL  GGWALRAAP+ALLVVVSWL+ K+SAGV+AR
Subjt:  SSFANFLTSDPSPFPSLLLLVLIFTIHGPTGRFFSYFLF-ARPALYYNCAGRYKVLCNPIANPSPRRLVCGGWALRAAPVALLVVVSWLTHKDSAGVSAR

Query:  KLGCSGCRVPTIFEHKAEAGEIGGFTPWILVGMILLLFNMAQRQALIRHCLFVRSM
        K    G RV TI EHKAE  EIGG TPW+LVGMI+LLFNMAQRQALIRHCLFVRSM
Subjt:  KLGCSGCRVPTIFEHKAEAGEIGGFTPWILVGMILLLFNMAQRQALIRHCLFVRSM
A0A5A7TJ52 Uncharacterized protein1.5e-5772.22Show/hide
Query:  IMPKAFSSFANFLTSDPSPFPSLLLLVLIFTIHGPTGRFFSYFLFA-RPALYYNCAGRYKVLCNPIANPSPRRLVCGGWALRAAPVALLVVVSWLTHKDS
        +M K + SF NFLTSDPSPFPSLLL++LIFT H P  RFFSY  F   P  YYNC G +K+LCNPI   SPRRL  GGWALRAAP+ALLVVVSWL+ K+S
Subjt:  IMPKAFSSFANFLTSDPSPFPSLLLLVLIFTIHGPTGRFFSYFLFA-RPALYYNCAGRYKVLCNPIANPSPRRLVCGGWALRAAPVALLVVVSWLTHKDS

Query:  AGVSARKLGCSGCRVPTIFEHKAEAGEIGGFTPWILVGMILLLFNMAQRQALIRHCLFVRSM
        AGV+ARK G  GC V TI EHKAE  EIGG TPW+LVG+I+LLFNMAQRQALIRHCLFVRSM
Subjt:  AGVSARKLGCSGCRVPTIFEHKAEAGEIGGFTPWILVGMILLLFNMAQRQALIRHCLFVRSM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAATGCCAAAAGCCTTCTCCTCTTTCGCAAATTTTCTAACTTCTGATCCCTCACCCTTCCCTTCTCTTCTCCTACTGGTTCTCATCTTCACCATCCATGGCCCCACAGG
TCGTTTCTTCTCCTACTTCCTGTTTGCAAGGCCTGCTCTGTACTACAATTGTGCTGGCCGCTATAAGGTCCTCTGCAATCCCATTGCAAATCCCAGCCCCAGAAGGTTGG
TTTGTGGTGGTTGGGCTTTACGAGCGGCGCCAGTCGCCTTACTCGTGGTGGTGAGTTGGTTGACTCATAAGGACTCAGCAGGAGTCTCTGCCAGGAAGTTGGGGTGTTCA
GGCTGCCGTGTCCCGACCATTTTCGAGCACAAGGCAGAGGCTGGAGAAATTGGTGGTTTTACTCCTTGGATTCTTGTGGGAATGATATTGCTGCTATTCAATATGGCTCA
ACGGCAGGCTCTTATAAGGCATTGCTTGTTCGTAAGAAGTATG
mRNA sequenceShow/hide mRNA sequence
ATAATGCCAAAAGCCTTCTCCTCTTTCGCAAATTTTCTAACTTCTGATCCCTCACCCTTCCCTTCTCTTCTCCTACTGGTTCTCATCTTCACCATCCATGGCCCCACAGG
TCGTTTCTTCTCCTACTTCCTGTTTGCAAGGCCTGCTCTGTACTACAATTGTGCTGGCCGCTATAAGGTCCTCTGCAATCCCATTGCAAATCCCAGCCCCAGAAGGTTGG
TTTGTGGTGGTTGGGCTTTACGAGCGGCGCCAGTCGCCTTACTCGTGGTGGTGAGTTGGTTGACTCATAAGGACTCAGCAGGAGTCTCTGCCAGGAAGTTGGGGTGTTCA
GGCTGCCGTGTCCCGACCATTTTCGAGCACAAGGCAGAGGCTGGAGAAATTGGTGGTTTTACTCCTTGGATTCTTGTGGGAATGATATTGCTGCTATTCAATATGGCTCA
ACGGCAGGCTCTTATAAGGCATTGCTTGTTCGTAAGAAGTATG
Protein sequenceShow/hide protein sequence
IMPKAFSSFANFLTSDPSPFPSLLLLVLIFTIHGPTGRFFSYFLFARPALYYNCAGRYKVLCNPIANPSPRRLVCGGWALRAAPVALLVVVSWLTHKDSAGVSARKLGCS
GCRVPTIFEHKAEAGEIGGFTPWILVGMILLLFNMAQRQALIRHCLFVRSM