; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013395 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013395
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor bHLH52-like
Genome locationscaffold402:945660..946535
RNA-Seq ExpressionMS013395
SyntenyMS013395
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583823.1 Transcription factor basic helix-loop-helix 52, partial [Cucurbita argyrosperma subsp. sororia]4.4e-9969.71Show/hide
Query:  MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVST
        MAALSFYSNF SDP         FSP+ SPELF+L   PPQLLPDPAFDY P AVD +VFFP    P  +D   S F FSDVYPY   PA+ D FVPVS 
Subjt:  MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVST

Query:  EFFPSDEFELHCPKRQRIVSEQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP---SNTLSAQTIAARERRRKITAKTQE
        EFFP DEFE +CPKRQR+V EQ+F YGG GG  GG GGYF PLPE     WD ++ NAE MN G CLK   +P   SN LSAQTIAARERRRKITAKTQE
Subjt:  EFFPSDEFELHCPKRQRIVSEQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP---SNTLSAQTIAARERRRKITAKTQE

Query:  LGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNS
        LGEL+PGG+KMNTAEML SAFKYVKFLQAQV ILQ+ QETEQ     E+E  ETE+LQILES M+QEKLYAEEKCLVPKGFVQNL N PEIQS+PSI NS
Subjt:  LGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNS

Query:  INQMLHM
        INQ+LHM
Subjt:  INQMLHM

XP_022142603.1 transcription factor bHLH53-like [Momordica charantia]8.8e-15698.29Show/hide
Query:  MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELH
        MAALSFYSNFCSDPLFFSPDFSPELFYLTPT PQLLPDPAFDYFPTAVD+TVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELH
Subjt:  MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELH

Query:  CPKRQRIVSEQNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEM
        CPKRQRIVSEQNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSK SPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEM
Subjt:  CPKRQRIVSEQNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEM

Query:  LHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ
        LHSAFKYVKFLQAQVGILQLMQETEQVK EE+EEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ
Subjt:  LHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ

XP_022927111.1 transcription factor bHLH52-like [Cucurbita moschata]9.9e-9969.13Show/hide
Query:  MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVST
        MAALSFYSNF SDP         FSP+ SPELF+L   PPQLLPDPAFDY   AVD +VFFP    P  DD   S F FSDVYPYF  PA+ D FVPVS 
Subjt:  MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVST

Query:  EFFPSDEFELHCPKRQRIVSEQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP-------SNTLSAQTIAARERRRKITA
        EFFP DEFE +CPKRQR+V EQ+F YGG GG  GG GGYF PLPE     WD ++ NAE MN G CLK   +P       SN LSAQTIAARERRRKITA
Subjt:  EFFPSDEFELHCPKRQRIVSEQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP-------SNTLSAQTIAARERRRKITA

Query:  KTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPS
        KTQELGEL+PGG+KMNTAEML SAFKYVKFLQAQV ILQ+ QETEQ     E+E  ETE+LQILES M+QEKLYAEEKCLVPKGFVQNL N PEIQS+PS
Subjt:  KTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPS

Query:  IFNSINQMLHM
        I NSINQ+LHM
Subjt:  IFNSINQMLHM

XP_023520229.1 transcription factor bHLH52-like [Cucurbita pepo subsp. pepo]2.6e-9969.77Show/hide
Query:  MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVST
        MAALSFYSNF SDP         FSP+ SPELF+L   PPQLLPDPAFDY P AVD +VFFP    P  DD   S F FSDVYPYF  PA+ D FVPVS 
Subjt:  MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVST

Query:  EFFPSDEFELHCPKRQRIVSEQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKS--------KPSP-SNTLSAQTIAARERRRKI
        EFFP DEFE +CPKRQR+V EQ+F YGG GG  GG GGYF PLPE     WD ++ NAE MN G CLK          PSP SN LSAQTIAARERRRKI
Subjt:  EFFPSDEFELHCPKRQRIVSEQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKS--------KPSP-SNTLSAQTIAARERRRKI

Query:  TAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSH
        TAKTQELGEL+PGG+KMNTAEML SAFKYVKFLQAQV ILQ+ QETEQ   E+E+E+ ETE+LQILES M+QEKLYAEEKCLVPKGFVQNL N PEIQS+
Subjt:  TAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSH

Query:  PSIFNSINQML
        PSI NSINQ+L
Subjt:  PSIFNSINQML

XP_038894685.1 transcription factor bHLH52 [Benincasa hispida]9.9e-9968.87Show/hide
Query:  MAALSFYSNFCSDPL-------FFSPDFSPELFYLTPTPPQLLPDP-AFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVS
        MAAL+FYSNF SDP        +FSP+FSP+L Y    PPQLL DP AFDY    VDD+VF+P    P  DD  +  F FSD YPYFS PA+ D F+PVS
Subjt:  MAALSFYSNFCSDPL-------FFSPDFSPELFYLTPTPPQLLPDP-AFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVS

Query:  TEFFPSDEFELHCPKRQRIVSEQNF----GYGGSGG--GGGGGYFPPLP------ELLPVPWDDKMNNAETMNAGTCLKSKPSP----SNTLSAQTIAAR
         EFFP DEFE HCPKRQR V EQ+F    G GG GG  GGGGGYFPP P      EL    WD +M+NAE MN G CLK+KP+P    SN LSAQTIAAR
Subjt:  TEFFPSDEFELHCPKRQRIVSEQNF----GYGGSGG--GGGGGYFPPLP------ELLPVPWDDKMNNAETMNAGTCLKSKPSP----SNTLSAQTIAAR

Query:  ERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANF
        ERRRKITAKTQELGEL+PGG+KMNTAEML+SAFKYVKFLQAQV ILQL QETEQ    E+E+EEETE+L+ILES M+QEKLY+EEKCLVPKGFVQNLANF
Subjt:  ERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANF

Query:  PEIQSHPSIFNSINQMLH
        PEIQSHPSIFNSINQ+LH
Subjt:  PEIQSHPSIFNSINQMLH

TrEMBL top hitse value%identityAlignment
A0A1S3BEE9 transcription factor bHLH525.3e-9064.67Show/hide
Query:  MAALSFYSNFCS-DPL----FFSPDFSPELFYLTPTPPQLLPDP-AFDYFPTAVDDTVFFP---PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEF
        MAAL+F+SNF S DP     +FSP+FSP+L Y+   PP LL DP AF Y    VDD+VF+P    L  DDA   F FSD YPYFSAP++ D F+PVS++F
Subjt:  MAALSFYSNFCS-DPL----FFSPDFSPELFYLTPTPPQLLPDP-AFDYFPTAVDDTVFFP---PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEF

Query:  FPSDEFELHCPKRQRIVSEQNF-----------GYGGSGGGGGGGYF-PPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP------SNTLSAQTIAARE
        FP DEFE HCPKRQR V EQ+F           G GG G G G G+F PPL E    PWD +M+NAE  N   CLKS+PSP      SN LSAQTIAARE
Subjt:  FPSDEFELHCPKRQRIVSEQNF-----------GYGGSGGGGGGGYF-PPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP------SNTLSAQTIAARE

Query:  RRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFP
        RRRKIT KTQELGEL+PGG+KMNTAEML+SAFKYVKFLQAQV ILQL QETEQ ++E+E+E +ETE L+ILES ++QEKLY EEKCLVPKGF+QNLA+FP
Subjt:  RRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFP

Query:  EIQSHPSIFNSINQMLH
        EIQSHPSIFNSIN++LH
Subjt:  EIQSHPSIFNSINQMLH

A0A5A7U090 Transcription factor bHLH525.3e-9064.67Show/hide
Query:  MAALSFYSNFCS-DPL----FFSPDFSPELFYLTPTPPQLLPDP-AFDYFPTAVDDTVFFP---PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEF
        MAAL+F+SNF S DP     +FSP+FSP+L Y+   PP LL DP AF Y    VDD+VF+P    L  DDA   F FSD YPYFSAP++ D F+PVS++F
Subjt:  MAALSFYSNFCS-DPL----FFSPDFSPELFYLTPTPPQLLPDP-AFDYFPTAVDDTVFFP---PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEF

Query:  FPSDEFELHCPKRQRIVSEQNF-----------GYGGSGGGGGGGYF-PPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP------SNTLSAQTIAARE
        FP DEFE HCPKRQR V EQ+F           G GG G G G G+F PPL E    PWD +M+NAE  N   CLKS+PSP      SN LSAQTIAARE
Subjt:  FPSDEFELHCPKRQRIVSEQNF-----------GYGGSGGGGGGGYF-PPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP------SNTLSAQTIAARE

Query:  RRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFP
        RRRKIT KTQELGEL+PGG+KMNTAEML+SAFKYVKFLQAQV ILQL QETEQ ++E+E+E +ETE L+ILES ++QEKLY EEKCLVPKGF+QNLA+FP
Subjt:  RRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFP

Query:  EIQSHPSIFNSINQMLH
        EIQSHPSIFNSIN++LH
Subjt:  EIQSHPSIFNSINQMLH

A0A6J1CNN4 transcription factor bHLH53-like4.3e-15698.29Show/hide
Query:  MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELH
        MAALSFYSNFCSDPLFFSPDFSPELFYLTPT PQLLPDPAFDYFPTAVD+TVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELH
Subjt:  MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELH

Query:  CPKRQRIVSEQNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEM
        CPKRQRIVSEQNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSK SPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEM
Subjt:  CPKRQRIVSEQNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEM

Query:  LHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ
        LHSAFKYVKFLQAQVGILQLMQETEQVK EE+EEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ
Subjt:  LHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ

A0A6J1EGS4 transcription factor bHLH52-like4.8e-9969.13Show/hide
Query:  MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVST
        MAALSFYSNF SDP         FSP+ SPELF+L   PPQLLPDPAFDY   AVD +VFFP    P  DD   S F FSDVYPYF  PA+ D FVPVS 
Subjt:  MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVST

Query:  EFFPSDEFELHCPKRQRIVSEQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP-------SNTLSAQTIAARERRRKITA
        EFFP DEFE +CPKRQR+V EQ+F YGG GG  GG GGYF PLPE     WD ++ NAE MN G CLK   +P       SN LSAQTIAARERRRKITA
Subjt:  EFFPSDEFELHCPKRQRIVSEQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSP-------SNTLSAQTIAARERRRKITA

Query:  KTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPS
        KTQELGEL+PGG+KMNTAEML SAFKYVKFLQAQV ILQ+ QETEQ     E+E  ETE+LQILES M+QEKLYAEEKCLVPKGFVQNL N PEIQS+PS
Subjt:  KTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPS

Query:  IFNSINQMLHM
        I NSINQ+LHM
Subjt:  IFNSINQMLHM

A0A6J1KJ69 transcription factor bHLH522.4e-9868.79Show/hide
Query:  MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVST
        MAALSFYSNF SDP         FSP+ SPELF+L   PPQLLPDP FDY P AVD +VFFP    P  DD   S F FSDVYPYF  PA+ D FVPVS 
Subjt:  MAALSFYSNFCSDPLF-------FSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFP----PLLDDDASSSFFFSDVYPYFSAPAIADCFVPVST

Query:  EFFPSDEFELHCPKRQRIVSEQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKS----------KPSP-SNTLSAQTIAARERRR
        EFFP DEFE +CPKRQR+V EQ+F YGG GG  GG GGYF PLPE     WD ++ NAE MN G CLK            PSP SN LSAQTIAARERRR
Subjt:  EFFPSDEFELHCPKRQRIVSEQNFGYGGSGG--GGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKS----------KPSP-SNTLSAQTIAARERRR

Query:  KITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQ
        KITAKTQELGEL+PGG+KMNTAEML SAFKYVKFLQAQV ILQ+ QETEQ     E+E+ ETE+LQILES M+QEKLYAEEKCLVPKGFVQNLAN  EIQ
Subjt:  KITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQ

Query:  SHPSIFNSINQMLH
        S+PSI NSINQ+LH
Subjt:  SHPSIFNSINQMLH

SwissProt top hitse value%identityAlignment
O81313 Transcription factor IND5.4e-0752.83Show/hide
Query:  QTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ
        QT+ AR RR +I+ K + L  ++PGG KM+TA ML  A +Y KFL+ QV ILQ
Subjt:  QTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ

Q7XAQ6 Transcription factor LAX PANICLE 17.1e-0743.84Show/hide
Query:  KSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ--LMQETE
        + +P    +   Q++AARERR +I+ + + L  L+PGG+KM+T  ML  A  YVKFL+AQV + Q  L+Q  E
Subjt:  KSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ--LMQETE

Q84RD0 Transcription factor bHLH536.8e-2637.12Show/hide
Query:  MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVP-VSTEFFPSD---E
        M  LS++ N+   P+     F PE+  + P            +F  +     F  PL  ++A S   F      F +P   + F+P    E F      +
Subjt:  MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVP-VSTEFFPSD---E

Query:  FELHCPKRQRIV-SEQNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLK-----SKPSPSNTLSAQTIAARERRRKITAKTQELGELIP
        F L  PKRQR+V S  N             +F P  +   VP           +     K        S   TLS+Q+IAAR RRR+I  KT ELG+LIP
Subjt:  FELHCPKRQRIV-SEQNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLK-----SKPSPSNTLSAQTIAARERRRKITAKTQELGELIP

Query:  GGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQML
        GGNK+NTAEM  +A KYVKFLQ+QVGILQLMQ T   K+     + ET+ L  LES  +QEKL  EE CLVP   VQ+L     I   P+I   IN++L
Subjt:  GGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQML

Q8S3D2 Transcription factor bHLH876.4e-0845.33Show/hide
Query:  MNAGTCLKSKPSPSN---TLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ
        +N G  +  KP   N   +   QT+AAR+RR +I+ K + L  L+PGG KM+TA ML  A  Y+KFL+AQV  L+
Subjt:  MNAGTCLKSKPSPSN---TLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ

Q9SA82 Transcription factor bHLH523.0e-2137.35Show/hide
Query:  PLLDDDA-SSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFEL----------HCPKRQRIVSEQNFGYGGSGGGGGGGYFPPLPE---LLPVPWDDK
        PL  D+A S S F  D Y +F      + F+P    F PS +  +          H PK Q+++ + +F +           F P PE   LL     + 
Subjt:  PLLDDDA-SSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFEL----------HCPKRQRIVSEQNFGYGGSGGGGGGGYFPPLPE---LLPVPWDDK

Query:  MNNAE--------TMNAGTCLKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEE
         N ++        T   G   +   +    LSAQ+IAAR+RRR+IT KTQELG+LIPG  K NTAEM ++A KYVKFLQAQ+ ILQL    +Q K +  +
Subjt:  MNNAE--------TMNAGTCLKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEE

Query:  EEEETEELQ-ILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQML
          +   E+Q +L S  +QEKL  EE C+VP+  VQ L     I ++P I   IN++L
Subjt:  EEEETEELQ-ILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQML

Arabidopsis top hitse value%identityAlignment
AT1G30670.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.1e-2237.35Show/hide
Query:  PLLDDDA-SSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFEL----------HCPKRQRIVSEQNFGYGGSGGGGGGGYFPPLPE---LLPVPWDDK
        PL  D+A S S F  D Y +F      + F+P    F PS +  +          H PK Q+++ + +F +           F P PE   LL     + 
Subjt:  PLLDDDA-SSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFEL----------HCPKRQRIVSEQNFGYGGSGGGGGGGYFPPLPE---LLPVPWDDK

Query:  MNNAE--------TMNAGTCLKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEE
         N ++        T   G   +   +    LSAQ+IAAR+RRR+IT KTQELG+LIPG  K NTAEM ++A KYVKFLQAQ+ ILQL    +Q K +  +
Subjt:  MNNAE--------TMNAGTCLKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEE

Query:  EEEETEELQ-ILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQML
          +   E+Q +L S  +QEKL  EE C+VP+  VQ L     I ++P I   IN++L
Subjt:  EEEETEELQ-ILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQML

AT1G66470.1 ROOT HAIR DEFECTIVE65.0e-0838.67Show/hide
Query:  AETMNAGTCLKSKPSPSNT-LSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGIL
        ++ +++G   K+KP P+ +    Q++AA+ RR +I+ + + L EL+P G K++   ML  A  YVKFLQ QV +L
Subjt:  AETMNAGTCLKSKPSPSNT-LSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGIL

AT2G34820.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.8e-2737.12Show/hide
Query:  MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVP-VSTEFFPSD---E
        M  LS++ N+   P+     F PE+  + P            +F  +     F  PL  ++A S   F      F +P   + F+P    E F      +
Subjt:  MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVP-VSTEFFPSD---E

Query:  FELHCPKRQRIV-SEQNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLK-----SKPSPSNTLSAQTIAARERRRKITAKTQELGELIP
        F L  PKRQR+V S  N             +F P  +   VP           +     K        S   TLS+Q+IAAR RRR+I  KT ELG+LIP
Subjt:  FELHCPKRQRIV-SEQNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLK-----SKPSPSNTLSAQTIAARERRRKITAKTQELGELIP

Query:  GGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQML
        GGNK+NTAEM  +A KYVKFLQ+QVGILQLMQ T   K+     + ET+ L  LES  +QEKL  EE CLVP   VQ+L     I   P+I   IN++L
Subjt:  GGNKMNTAEMLHSAFKYVKFLQAQVGILQLMQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQML

AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.5e-0945.33Show/hide
Query:  MNAGTCLKSKPSPSN---TLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ
        +N G  +  KP   N   +   QT+AAR+RR +I+ K + L  L+PGG KM+TA ML  A  Y+KFL+AQV  L+
Subjt:  MNAGTCLKSKPSPSN---TLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ

AT4G00120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.8e-0852.83Show/hide
Query:  QTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ
        QT+ AR RR +I+ K + L  ++PGG KM+TA ML  A +Y KFL+ QV ILQ
Subjt:  QTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCTCAGCTTTTACTCCAATTTCTGCTCCGATCCCCTGTTTTTCTCCCCCGACTTCTCGCCGGAGCTTTTCTATCTAACCCCAACTCCGCCGCAGCTCCTCCC
CGACCCCGCCTTCGATTACTTCCCCACTGCCGTCGACGACACTGTCTTTTTCCCGCCGTTACTCGACGACGACGCCTCGTCGTCGTTCTTCTTCTCCGACGTCTATCCCT
ACTTCTCTGCTCCTGCCATTGCCGATTGCTTCGTTCCCGTCTCCACCGAATTCTTCCCGTCTGATGAATTTGAGCTACATTGCCCCAAACGCCAGAGGATCGTGTCGGAG
CAGAATTTCGGTTACGGTGGCAGTGGCGGTGGCGGAGGTGGAGGATACTTTCCTCCTCTGCCGGAGTTGCTTCCGGTGCCGTGGGACGACAAAATGAACAATGCTGAAAC
GATGAATGCTGGCACTTGCTTGAAGAGTAAACCGTCCCCGAGTAACACGTTATCGGCGCAGACGATCGCAGCCCGGGAGCGGCGGAGGAAGATAACGGCAAAGACGCAGG
AGCTCGGTGAGCTGATTCCGGGGGGGAACAAGATGAACACTGCTGAAATGCTGCACTCTGCATTCAAATATGTCAAATTCTTGCAAGCCCAAGTGGGGATTCTGCAACTT
ATGCAAGAAACAGAGCAAGTAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACAGAGGAGCTGCAGATTCTTGAATCCGCCATGGTTCAAGAGAAGCTCTACGCAGAAGA
AAAGTGTTTGGTTCCAAAAGGGTTCGTCCAAAATCTTGCAAATTTCCCAGAGATTCAATCGCATCCGTCCATTTTCAACTCCATCAATCAGATGCTTCATATGCAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCTCAGCTTTTACTCCAATTTCTGCTCCGATCCCCTGTTTTTCTCCCCCGACTTCTCGCCGGAGCTTTTCTATCTAACCCCAACTCCGCCGCAGCTCCTCCC
CGACCCCGCCTTCGATTACTTCCCCACTGCCGTCGACGACACTGTCTTTTTCCCGCCGTTACTCGACGACGACGCCTCGTCGTCGTTCTTCTTCTCCGACGTCTATCCCT
ACTTCTCTGCTCCTGCCATTGCCGATTGCTTCGTTCCCGTCTCCACCGAATTCTTCCCGTCTGATGAATTTGAGCTACATTGCCCCAAACGCCAGAGGATCGTGTCGGAG
CAGAATTTCGGTTACGGTGGCAGTGGCGGTGGCGGAGGTGGAGGATACTTTCCTCCTCTGCCGGAGTTGCTTCCGGTGCCGTGGGACGACAAAATGAACAATGCTGAAAC
GATGAATGCTGGCACTTGCTTGAAGAGTAAACCGTCCCCGAGTAACACGTTATCGGCGCAGACGATCGCAGCCCGGGAGCGGCGGAGGAAGATAACGGCAAAGACGCAGG
AGCTCGGTGAGCTGATTCCGGGGGGGAACAAGATGAACACTGCTGAAATGCTGCACTCTGCATTCAAATATGTCAAATTCTTGCAAGCCCAAGTGGGGATTCTGCAACTT
ATGCAAGAAACAGAGCAAGTAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACAGAGGAGCTGCAGATTCTTGAATCCGCCATGGTTCAAGAGAAGCTCTACGCAGAAGA
AAAGTGTTTGGTTCCAAAAGGGTTCGTCCAAAATCTTGCAAATTTCCCAGAGATTCAATCGCATCCGTCCATTTTCAACTCCATCAATCAGATGCTTCATATGCAG
Protein sequenceShow/hide protein sequence
MAALSFYSNFCSDPLFFSPDFSPELFYLTPTPPQLLPDPAFDYFPTAVDDTVFFPPLLDDDASSSFFFSDVYPYFSAPAIADCFVPVSTEFFPSDEFELHCPKRQRIVSE
QNFGYGGSGGGGGGGYFPPLPELLPVPWDDKMNNAETMNAGTCLKSKPSPSNTLSAQTIAARERRRKITAKTQELGELIPGGNKMNTAEMLHSAFKYVKFLQAQVGILQL
MQETEQVKEEEEEEEEETEELQILESAMVQEKLYAEEKCLVPKGFVQNLANFPEIQSHPSIFNSINQMLHMQ