CuGenDBv2

Gene ID	MS013397
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	twinkle homolog protein, chloroplastic/mitochondrial isoform X1
Genome location	scaffold402:951402..955673
RNA-Seq Expression	MS013397
Synteny	MS013397
Gene Ontology terms	GO:0006260 - DNA replication (biological process) GO:0006353 - DNA-templated transcription, termination (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0003690 - double-stranded DNA binding (molecular function) GO:0003697 - single-stranded DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0043139 - 5'-3' DNA helicase activity (molecular function)
InterPro domains	IPR027032 - Twinkle-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7019451.1 Twinkle-like protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.2e-91

72.11

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHI-SSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPP
        MRFLHHNQC +S  +KLSSLSSSF LMGS  LCKS SL+FLS + SSSS  + QR FLY++N +LHGSFPV+PMS  K FSMK NGVS FTSHANVP PP
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHI-SSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPP

Query:  GTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQV
              NPL E LS T+LN+L+KKL+EL+I+ E CVPGQTNHLLCPMCKGGDSGER+LSL+ISEDGGAAVW+CF AKCGWKGRTLAFADGRSS+   GQ+
Subjt:  GTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQV

Query:  AINKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV
         + +KKRKIT ESLQLEPLCD       ERLISK+TLLRNSVMQKRS+NQ+
Subjt:  AINKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV

XP_022142394.1 twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Momordica charantia]

5.5e-119

89.2

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPG
        MRFLHHNQCFHSP TKLSSLSSSFNLMGSIPLCKS SLVFLSHISSSSYC+ QRNFLYRTNLLLHGSFPVQ MSPRK FSMKTNGVSPFTSHANVPGPP 
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPG

Query:  TNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA
                DEGLSSTQLNVLRKKLEELN+NTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICF AKCGWKGRTLAFADGRSSYGSLGQVA
Subjt:  TNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA

Query:  INKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV
        +NKKKRKIT ESLQLEPLCD       ERLISKNTLLRNSVMQKRSDNQ+
Subjt:  INKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV

XP_022142535.1 transcription termination factor MTERF15, mitochondrial-like isoform X1 [Momordica charantia]

1.9e-116

92.67

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPG
        MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYC+WQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPP 
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPG

Query:  TNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA
                DEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA
Subjt:  TNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA

Query:  INKKKRKITAESLQLEPLCDERLISKNTLLRN
        INKKKRKITAESLQLEPLCDE   SK   L N
Subjt:  INKKKRKITAESLQLEPLCDERLISKNTLLRN

XP_022927084.1 twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucurbita moschata]

1.1e-90

71.83

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHI--SSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP
        MRFLHHNQC +S  +KLSSLSSSF LMGS  LCKS SL+FLS +  SSSS  + QR FLY++N +LHGSFPV+PMS  K FSMK NGVS FTSHANVP P
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHI--SSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP

Query:  PGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ
        P      NPL E LS T+LN+L+KKL+EL+I+ E CVPGQTNHLLCPMCKGGDSGER+LSL+ISEDGGAAVW+CF AKCGWKGRTLAFADGRSS+   GQ
Subjt:  PGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ

Query:  VAINKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV
        + + +KKRKIT ESLQLEPLCD       ERLISK+TLLRNSVMQKRS+NQ+
Subjt:  VAINKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV

XP_038894379.1 twinkle homolog protein, chloroplastic/mitochondrial [Benincasa hispida]

1.6e-97

75.2

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPG
        MRFLHHNQC ++P + LSS SSSFNLMG+IPLCKS SLV LSH+SSSS  +  + FLYR+N LLHG FPV+PMS  KPFSMK NGVS FTSH+NVP PP 
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPG

Query:  TNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA
             NPLDE LSST LNVLRKKL+EL+I+TESCVPGQTNHLLCPMCKGGDSGER  SLYISEDGGAA+W+CF AKCGWKGRTLAFADG SSY +LGQVA
Subjt:  TNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA

Query:  INKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV
        + + KRKIT ESLQLEPLCD       ERLISKNTLLRNSVMQKR +NQ+
Subjt:  INKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CL75 transcription termination factor MTERF15, mitochondrial-like isoform X1

9.4e-117

92.67

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPG
        MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYC+WQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPP 
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPG

Query:  TNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA
                DEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA
Subjt:  TNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA

Query:  INKKKRKITAESLQLEPLCDERLISKNTLLRN
        INKKKRKITAESLQLEPLCDE   SK   L N
Subjt:  INKKKRKITAESLQLEPLCDERLISKNTLLRN

A0A6J1CLF6 twinkle homolog protein, chloroplastic/mitochondrial isoform X1

2.7e-119

89.2

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPG
        MRFLHHNQCFHSP TKLSSLSSSFNLMGSIPLCKS SLVFLSHISSSSYC+ QRNFLYRTNLLLHGSFPVQ MSPRK FSMKTNGVSPFTSHANVPGPP 
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPG

Query:  TNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA
                DEGLSSTQLNVLRKKLEELN+NTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICF AKCGWKGRTLAFADGRSSYGSLGQVA
Subjt:  TNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA

Query:  INKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV
        +NKKKRKIT ESLQLEPLCD       ERLISKNTLLRNSVMQKRSDNQ+
Subjt:  INKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV

A0A6J1EH06 twinkle homolog protein, chloroplastic/mitochondrial isoform X1

5.2e-91

71.83

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHI--SSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP
        MRFLHHNQC +S  +KLSSLSSSF LMGS  LCKS SL+FLS +  SSSS  + QR FLY++N +LHGSFPV+PMS  K FSMK NGVS FTSHANVP P
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHI--SSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP

Query:  PGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ
        P      NPL E LS T+LN+L+KKL+EL+I+ E CVPGQTNHLLCPMCKGGDSGER+LSL+ISEDGGAAVW+CF AKCGWKGRTLAFADGRSS+   GQ
Subjt:  PGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ

Query:  VAINKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV
        + + +KKRKIT ESLQLEPLCD       ERLISK+TLLRNSVMQKRS+NQ+
Subjt:  VAINKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV

A0A6J1EMW1 twinkle homolog protein, chloroplastic/mitochondrial isoform X2

5.2e-91

71.83

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHI--SSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP
        MRFLHHNQC +S  +KLSSLSSSF LMGS  LCKS SL+FLS +  SSSS  + QR FLY++N +LHGSFPV+PMS  K FSMK NGVS FTSHANVP P
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHI--SSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP

Query:  PGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ
        P      NPL E LS T+LN+L+KKL+EL+I+ E CVPGQTNHLLCPMCKGGDSGER+LSL+ISEDGGAAVW+CF AKCGWKGRTLAFADGRSS+   GQ
Subjt:  PGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ

Query:  VAINKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV
        + + +KKRKIT ESLQLEPLCD       ERLISK+TLLRNSVMQKRS+NQ+
Subjt:  VAINKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV

A0A6J1KLG2 twinkle homolog protein, chloroplastic/mitochondrial

4.4e-90

71.83

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHI--SSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP
        MRFLHHNQC  S  +KLSSLSSSF LMGS  LCKS SL+FLS +  SSSS  + QR FLY++N +LHGSFPV+PMS  K FSMK NGVS FTSHANVP P
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHI--SSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP

Query:  PGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ
        P      NPL E LS T+LN+L+KKL+EL+I+ E CVPGQTNHLLCPMCKGGDSGER+LSL ISEDGGAAVW+CF AKCGWKGRTLAFADGR S+ S GQ
Subjt:  PGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ

Query:  VAINKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV
        + + +KKRKIT ESLQLEPLCD       ERLISK+TLLRNSVMQKRS+NQ+
Subjt:  VAINKKKRKITAESLQLEPLCD-------ERLISKNTLLRNSVMQKRSDNQV

SwissProt top hits

e value

%identity

Alignment

B5X582 Twinkle homolog protein, chloroplastic/mitochondrial

4.3e-34

39.37

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFN-LMGS---IPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVP
        MRFL        P      LS S + LMGS   +  C  PS  F S+ SS SY + ++  +   +         +P+S   P+  +TNG+S + S   VP
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFN-LMGS---IPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVP

Query:  GPPGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSL
         P  T +EA   D+ +  ++L  LR+KL E  ++ E+C PGQ + L+CP C+GG+SGE+SLSL+I+ DG +A W CF  KCG KG        R+  G  
Subjt:  GPPGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSL

Query:  GQVAINKKKRKITAESLQLEPLCDE-------RLISKNTLLRNSVMQKRSDNQV
            I K +RKIT E ++LEPLCDE       R IS+ TL RN VMQKR  +++
Subjt:  GQVAINKKKRKITAESLQLEPLCDE-------RLISKNTLLRNSVMQKRSDNQV

F4I6E6 Primase homolog protein

3.8e-22

46.32

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Query:  TQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAINKKKRKITAESLQ
        ++L  L +KL E  I+ ++C PG  + L+CP C+ GDSGE+SL+LYI  DG +A W C   KCG KG  +   DG+     + +  I K +RKIT ES++
Subjt:  TQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAINKKKRKITAESLQ

Query:  LEPLCDE-------RLISKNTLLRNSVMQKRSDNQV
        LEPLCDE       R IS  TL RN VMQKR D+++
Subjt:  LEPLCDE-------RLISKNTLLRNSVMQKRSDNQV

Arabidopsis top hits

e value

%identity

Alignment

AT1G30660.1 nucleic acid binding;nucleic acid binding

2.7e-23

46.32

Show/hide

Query:  TQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAINKKKRKITAESLQ
        ++L  L +KL E  I+ ++C PG  + L+CP C+ GDSGE+SL+LYI  DG +A W C   KCG KG  +   DG+     + +  I K +RKIT ES++
Subjt:  TQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAINKKKRKITAESLQ

Query:  LEPLCDE-------RLISKNTLLRNSVMQKRSDNQV
        LEPLCDE       R IS  TL RN VMQKR D+++
Subjt:  LEPLCDE-------RLISKNTLLRNSVMQKRSDNQV

AT1G30680.1 toprim domain-containing protein

3.1e-35

39.37

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFN-LMGS---IPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVP
        MRFL        P      LS S + LMGS   +  C  PS  F S+ SS SY + ++  +   +         +P+S   P+  +TNG+S + S   VP
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFN-LMGS---IPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVP

Query:  GPPGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSL
         P  T +EA   D+ +  ++L  LR+KL E  ++ E+C PGQ + L+CP C+GG+SGE+SLSL+I+ DG +A W CF  KCG KG        R+  G  
Subjt:  GPPGTNIEANPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSL

Query:  GQVAINKKKRKITAESLQLEPLCDE-------RLISKNTLLRNSVMQKRSDNQV
            I K +RKIT E ++LEPLCDE       R IS+ TL RN VMQKR  +++
Subjt:  GQVAINKKKRKITAESLQLEPLCDE-------RLISKNTLLRNSVMQKRSDNQV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTTTTCTTCACCACAATCAGTGTTTCCATAGCCCCCTCACCAAGCTCTCTTCCCTTTCGTCCTCATTCAATCTAATGGGTTCCATTCCCTTGTGCAAGTCCCCTTC
TCTGGTGTTCCTGTCTCACATTTCTTCTTCTTCTTATTGTGCTTGGCAGAGGAATTTCCTGTACAGAACCAATCTTCTTCTCCATGGTTCATTTCCTGTGCAACCCATGT
CCCCTCGTAAACCCTTTTCCATGAAAACAAATGGGGTCTCTCCTTTTACTTCTCATGCCAATGTTCCCGGGCCCCCAGGTACTAATATTGAAGCTAATCCACTAGACGAG
GGTTTAAGCTCGACTCAATTGAATGTTTTGAGGAAAAAATTGGAGGAACTTAACATCAACACCGAATCTTGTGTTCCAGGGCAGACGAACCACCTGCTTTGCCCCATGTG
CAAAGGTGGTGATTCAGGGGAAAGGTCCTTATCCCTATATATCTCAGAAGATGGGGGGGCTGCTGTTTGGATCTGCTTTTGTGCAAAATGTGGTTGGAAAGGCCGCACTC
TGGCCTTTGCTGATGGTCGGTCATCATATGGAAGCTTGGGACAAGTTGCAATTAACAAGAAAAAACGGAAAATTACAGCTGAGAGTCTACAACTTGAACCACTGTGTGAC
GAGCGACTGATTTCCAAAAACACGTTGTTAAGAAATTCTGTTATGCAGAAAAGATCCGATAATCAGGTA

mRNA sequence

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Protein sequence

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MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCAWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPGTNIEANPLDE
GLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAINKKKRKITAESLQLEPLCD
ERLISKNTLLRNSVMQKRSDNQV

MS013397 (gene) of Bitter gourd (TR) v1 genome