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MS013404 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013404
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFAD-binding Berberine family protein
Genome locationscaffold402:1274368..1274626
RNA-Seq ExpressionMS013404
SyntenyMS013404
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
GO:0071949 - FAD binding (molecular function)
InterPro domainsIPR012951 - Berberine/berberine-like
IPR016169 - FAD-binding, type PCMH, subdomain 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573418.1 Berberine bridge enzyme-like 15, partial [Cucurbita argyrosperma subsp. sororia]4.6e-2071.23Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDN
        D+ LGRN+GRNTSYE  K WGLKYF GNFERLV+VKTKFDPLNFFWNEQ+IPL ++ E+   RI +V+SDLD+
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDN

XP_008445632.1 PREDICTED: flavin-dependent oxidoreductase FOX5-like [Cucumis melo]4.2e-2166.67Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER
        D+ LGRN+GRNTSYE  K WGLKYF+ NFERLVRVKTK DP NFFWNEQ+IPL +HYE++ TRI++VH        S LD EI+QER
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER

XP_022140178.1 berberine bridge enzyme-like 8 [Momordica charantia]9.0e-2471.26Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER
        D+ LGRN+ RNTSY+  K WGLKYF GNFERLVRVKTK DPLNFFWNEQ+IPL HH+EENGTRI QV+        S LDS+ILQER
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER

XP_023542153.1 berberine bridge enzyme-like 15 [Cucurbita pepo subsp. pepo]2.7e-2065.52Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER
        D+ LGRN+GRNTSYE  K WGLKYF GNFERLV+VKTKFDPLNFFWNEQ+IPL ++ E+   RI +V+        SDLDSE +QER
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER

XP_038895849.1 berberine bridge enzyme-like 8 [Benincasa hispida]7.1e-2166.67Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER
        D+ LGRN+ +NTSYE  K WGLKYF+ NFERLVRVKTK DPLNFFWNEQ+IPL +HYE++ TRIS+VH        S LD EI+QER
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER

TrEMBL top hitse value%identityAlignment
A0A1S3BE11 flavin-dependent oxidoreductase FOX5-like2.0e-2166.67Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER
        D+ LGRN+GRNTSYE  K WGLKYF+ NFERLVRVKTK DP NFFWNEQ+IPL +HYE++ TRI++VH        S LD EI+QER
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER

A0A5A7TYX1 Flavin-dependent oxidoreductase FOX5-like2.0e-2166.67Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER
        D+ LGRN+GRNTSYE  K WGLKYF+ NFERLVRVKTK DP NFFWNEQ+IPL +HYE++ TRI++VH        S LD EI+QER
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER

A0A6J1CHF0 berberine bridge enzyme-like 84.3e-2471.26Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER
        D+ LGRN+ RNTSY+  K WGLKYF GNFERLVRVKTK DPLNFFWNEQ+IPL HH+EENGTRI QV+        S LDS+ILQER
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER

A0A6J1GQY4 berberine bridge enzyme-like 152.2e-2071.23Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDN
        D+ LGRN+GRNTSYE  K WGLKYF GNFERLV+VKTKFDPLNFFWNEQ+IPL ++ E+   RI +V+SDLD+
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDN

A0A6J1JUS4 berberine bridge enzyme-like 155.0e-2064.37Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER
        D+ LGRN+GRNTSYE  K WGLKYF GNFERLV+VKTKFDPLNFFWNEQ+IPL ++ E+   RI +V+        SDL+SE +QER
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER

SwissProt top hitse value%identityAlignment
Q9FI21 Berberine bridge enzyme-like 285.0e-0959.26Show/hide
Query:  DIGLGRNHG-RNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPL
        D+ LG   G + T YE  K WG+KYF  NFERLVRVKT+ DP +FF +EQ+IPL
Subjt:  DIGLGRNHG-RNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPL

Q9FI25 Berberine bridge enzyme-like 273.8e-0952.46Show/hide
Query:  DIGLGRNHGRN--TSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEE
        DI LG   G N  T YE  K WG+KYF  NF+RLVRVKT  DP++FF +EQ+IP+  +  +
Subjt:  DIGLGRNHGRN--TSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEE

Q9FKV0 Berberine bridge enzyme-like 246.5e-0952.94Show/hide
Query:  DIGLGRNHGRNTSYERQKWGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP
        D G  +N+ +    E + WG KYF GNF+RLV++KTK DP NFF +EQ+IP
Subjt:  DIGLGRNHGRNTSYERQKWGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP

Q9FKV2 Berberine bridge enzyme-like 231.3e-0957.69Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP
        D+ LG N G NTS+E  K WG +YF  NF+RL  VK K DP NFF NEQ++P
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP

Q9SUC6 Berberine bridge enzyme-like 225.0e-0959.62Show/hide
Query:  DIGLGRNHGRNTSYE-RQKWGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP
        D+ LG   G NTS+E  +KWG  YF GNF+RL  VK K DP NFF NEQ+IP
Subjt:  DIGLGRNHGRNTSYE-RQKWGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP

Arabidopsis top hitse value%identityAlignment
AT4G20860.1 FAD-binding Berberine family protein3.5e-1059.62Show/hide
Query:  DIGLGRNHGRNTSYE-RQKWGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP
        D+ LG   G NTS+E  +KWG  YF GNF+RL  VK K DP NFF NEQ+IP
Subjt:  DIGLGRNHGRNTSYE-RQKWGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP

AT5G44360.1 FAD-binding Berberine family protein9.3e-1157.69Show/hide
Query:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP
        D+ LG N G NTS+E  K WG +YF  NF+RL  VK K DP NFF NEQ++P
Subjt:  DIGLGRNHGRNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP

AT5G44380.1 FAD-binding Berberine family protein4.6e-1052.94Show/hide
Query:  DIGLGRNHGRNTSYERQKWGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP
        D G  +N+ +    E + WG KYF GNF+RLV++KTK DP NFF +EQ+IP
Subjt:  DIGLGRNHGRNTSYERQKWGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIP

AT5G44410.1 FAD-binding Berberine family protein2.7e-1052.46Show/hide
Query:  DIGLGRNHGRN--TSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEE
        DI LG   G N  T YE  K WG+KYF  NF+RLVRVKT  DP++FF +EQ+IP+  +  +
Subjt:  DIGLGRNHGRN--TSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEE

AT5G44440.1 FAD-binding Berberine family protein3.5e-1059.26Show/hide
Query:  DIGLGRNHG-RNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPL
        D+ LG   G + T YE  K WG+KYF  NFERLVRVKT+ DP +FF +EQ+IPL
Subjt:  DIGLGRNHG-RNTSYERQK-WGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACATTGGTTTGGGAAGAAACCATGGAAGAAATACAAGCTATGAAAGGCAAAAGTGGGGTTTGAAGTATTTCAATGGTAATTTTGAGAGATTGGTGAGAGTGAAGACCAA
ATTTGATCCTCTGAACTTCTTTTGGAATGAACAAAACATTCCTCTTTTCCATCATTATGAAGAAAATGGCACAAGAATTTCACAGGTTCACTCAGACTTGGACAATTTCA
CAGGTTCAGACTTGGACTCTGAAATTCTTCAAGAAAGA
mRNA sequenceShow/hide mRNA sequence
GACATTGGTTTGGGAAGAAACCATGGAAGAAATACAAGCTATGAAAGGCAAAAGTGGGGTTTGAAGTATTTCAATGGTAATTTTGAGAGATTGGTGAGAGTGAAGACCAA
ATTTGATCCTCTGAACTTCTTTTGGAATGAACAAAACATTCCTCTTTTCCATCATTATGAAGAAAATGGCACAAGAATTTCACAGGTTCACTCAGACTTGGACAATTTCA
CAGGTTCAGACTTGGACTCTGAAATTCTTCAAGAAAGA
Protein sequenceShow/hide protein sequence
DIGLGRNHGRNTSYERQKWGLKYFNGNFERLVRVKTKFDPLNFFWNEQNIPLFHHYEENGTRISQVHSDLDNFTGSDLDSEILQER