CuGenDBv2

Gene ID	MS013419
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	GDP-L-galactose phosphorylase 1-like
Genome location	scaffold402:1385106..1385285
RNA-Seq Expression	MS013419
Synteny	MS013419
Gene Ontology terms	GO:0005737 - cytoplasm (cellular component) GO:0000166 - nucleotide binding (molecular function) GO:0016779 - nucleotidyltransferase activity (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0080048 - GDP-D-glucose phosphorylase activity (molecular function)
InterPro domains	IPR026506 - GDP-L-galactose/GDP-D-glucose phosphorylase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6583851.1 GDP-L-galactose phosphorylase 1, partial [Cucurbita argyrosperma subsp. sororia]

3.8e-21

86.67

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        GIYVSTIT YPVK L+FES+ NLKKMG+VIA+ICSHLQEKC+LYNLLIRDCGKKIFLFLQ
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

KAG7019471.1 GDP-L-galactose phosphorylase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.8e-21

86.67

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        GIYVSTIT YPVK L+FES+ NLKKMG+VIA+ICSHLQEKC+LYNLLIRDCGKKIFLFLQ
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

XP_022140026.1 GDP-L-galactose phosphorylase 1-like [Momordica charantia]

1.9e-25

100

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

XP_022927227.1 GDP-L-galactose phosphorylase 1-like isoform X1 [Cucurbita moschata]

3.8e-21

86.67

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        GIYVSTIT YPVK L+FES+ NLKKMG+VIA+ICSHLQEKC+LYNLLIRDCGKKIFLFLQ
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

XP_022927234.1 GDP-L-galactose phosphorylase 1-like isoform X2 [Cucurbita moschata]

3.8e-21

86.67

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        GIYVSTIT YPVK L+FES+ NLKKMG+VIA+ICSHLQEKC+LYNLLIRDCGKKIFLFLQ
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CEI2 GDP-L-galactose phosphorylase 1-like

9.4e-26

100

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

A0A6J1EGL2 GDP-L-galactose phosphorylase 1-like isoform X1

1.8e-21

86.67

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        GIYVSTIT YPVK L+FES+ NLKKMG+VIA+ICSHLQEKC+LYNLLIRDCGKKIFLFLQ
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

A0A6J1EHG1 GDP-L-galactose phosphorylase 1-like isoform X2

1.8e-21

86.67

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        GIYVSTIT YPVK L+FES+ NLKKMG+VIA+ICSHLQEKC+LYNLLIRDCGKKIFLFLQ
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

A0A6J1KK34 GDP-L-galactose phosphorylase 1-like isoform X2

2.0e-20

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        GI VSTIT YPVK L+FES+ NLKKMG+VIA+ICSHLQEKC+LYNLLIRDCGKKIFLFLQ
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

A0A6J1KLR2 GDP-L-galactose phosphorylase 1-like isoform X1

2.0e-20

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        GI VSTIT YPVK L+FES+ NLKKMG+VIA+ICSHLQEKC+LYNLLIRDCGKKIFLFLQ
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

SwissProt top hits

e value

%identity

Alignment

Q8RWE8 GDP-L-galactose phosphorylase 1

5.5e-07

36.67

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        G+ +S +  YPV++L+FE   +++++ + ++  C  LQ   I +N+LI DCG++IFL  Q
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

Q9FLP9 GDP-L-galactose phosphorylase 2

4.4e-04

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        G+ +S +  YPV+ L+ E    +K + + ++     LQ   I +N+LI D GK+IFL  Q
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

Arabidopsis top hits

e value

%identity

Alignment

AT4G26850.1 mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase

3.9e-08

36.67

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        G+ +S +  YPV++L+FE   +++++ + ++  C  LQ   I +N+LI DCG++IFL  Q
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

AT5G55120.1 galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases

3.1e-05

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Query:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ
        G+ +S +  YPV+ L+ E    +K + + ++     LQ   I +N+LI D GK+IFL  Q
Subjt:  GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

Sequences

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CDS sequence

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GGGATTTATGTTTCTACCATCACAGGCTACCCTGTTAAGACCCTCGTATTTGAGAGCAACTACAACTTGAAGAAAATGGGAGAGGTTATTGCCAAGATATGTTCTCATTT
ACAGGAGAAATGCATTCTGTACAATCTGCTGATTCGTGATTGTGGCAAGAAGATTTTCTTGTTTCTTCAG

mRNA sequence

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GGGATTTATGTTTCTACCATCACAGGCTACCCTGTTAAGACCCTCGTATTTGAGAGCAACTACAACTTGAAGAAAATGGGAGAGGTTATTGCCAAGATATGTTCTCATTT
ACAGGAGAAATGCATTCTGTACAATCTGCTGATTCGTGATTGTGGCAAGAAGATTTTCTTGTTTCTTCAG

Protein sequence

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GIYVSTITGYPVKTLVFESNYNLKKMGEVIAKICSHLQEKCILYNLLIRDCGKKIFLFLQ

MS013419 (gene) of Bitter gourd (TR) v1 genome