CuGenDBv2

Gene ID	MS013421
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein Ycf2
Genome location	scaffold402:1398791..1399001
RNA-Seq Expression	MS013421
Synteny	MS013421
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009412701.1 Ycf2 [Phellodendron amurense]

2.2e-20

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

YP_009476227.1 Ycf2 [Eurycorymbus cavaleriei]

2.2e-20

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

YP_009478404.1 Ycf2 [Zanthoxylum simulans]

2.2e-20

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

YP_009873430.1 hypothetical protein RF2 [Acer sutchuenense subsp. tienchuanense]

2.2e-20

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

YP_010143466.1 Ycf2 [Peganum harmala]

2.2e-20

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

TrEMBL top hits

e value

%identity

Alignment

A0A159BNP4 Protein Ycf2

1.0e-20

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

A0A1B0V9X6 Protein Ycf2

1.0e-20

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

A0A1Z1G971 Protein Ycf2

1.0e-20

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

A0A7G7XSR2 Protein Ycf2

1.0e-20

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

A0A7L9CVW6 Protein Ycf2

1.0e-20

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

SwissProt top hits

e value

%identity

Alignment

A4QKE8 Protein Ycf2

1.6e-21

78.87

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI+RQRWL TNSSLSNGFF S T SESYQYLSNL  SNGTLLD+MTKTLL+K+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

A4QLE9 Protein Ycf2

1.6e-21

78.87

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI+RQRWL TNSSLSNGFF S T SESYQYLSNL  SNGTLLD+MTKTLL+K+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

B1A978 Protein Ycf2

2.8e-23

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

Q09MB4 Protein Ycf2

2.8e-23

83.1

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNGTLLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

Q49KT6 Protein Ycf2

1.4e-22

81.69

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI RQRWL TNSSLSNGFF S TPSESYQYLSNL  SNG LLDQMTKTLLRK+  +P+EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

9.4e-22

77.46

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI+RQRWL TNSSLSNGFF S T SESYQYLSNL  SNGTLLD+MTKTLL+K+  + +EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

9.4e-22

77.46

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Query:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM
        EKHFELLI+RQRWL TNSSLSNGFF S T SESYQYLSNL  SNGTLLD+MTKTLL+K+  + +EMKI FM
Subjt:  EKHFELLIRRQRWL-TNSSLSNGFFCS-TPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

Sequences

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CDS sequence

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GAAAAACACTTCGAATTGTTGATTCGTCGCCAAAGATGGCTTACCAATAGTTCATTATCTAATGGATTTTTCTGTTCTACTCCATCCGAAAGTTATCAGTATTTATCAAA
TTTGTTACCATCTAACGGAACGCTATTGGATCAAATGACAAAGACATTGTTGAGAAAAAAAGTGTTTTACCCGAATGAAATGAAAATTAGATTCATG

mRNA sequence

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Protein sequence

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EKHFELLIRRQRWLTNSSLSNGFFCSTPSESYQYLSNLLPSNGTLLDQMTKTLLRKKVFYPNEMKIRFM

MS013421 (gene) of Bitter gourd (TR) v1 genome