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MS013427 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013427
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBES1_N domain-containing protein
Genome locationscaffold402:1442573..1442824
RNA-Seq ExpressionMS013427
SyntenyMS013427
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009742 - brassinosteroid mediated signaling pathway (biological process)
GO:0048831 - regulation of shoot system development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR008540 - BES1/BZR1 plant transcription factor, N-terminal
IPR033264 - BZR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE7996074.1 hypothetical protein FH972_000823 [Carpinus fangiana]4.2e-2680.49Show/hide
Query:  KRVGSGSGGGGGV----RSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRS
        K VG  +   GGV    R+E+EKEKTKMRERQRRAITTNIFHGLRK+GGYRLSPRADINEVLRELAKEAGW+V PDGTTYRS
Subjt:  KRVGSGSGGGGGV----RSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRS

KAF7842470.1 UBN2_3 domain-containing protein [Senna tora]2.6e-2888Show/hide
Query:  SGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
        S S G GG RSE+EKEKTKMRER RRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGW+V PDGTTYRS+
Subjt:  SGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA

XP_022140110.1 protein BZR1 homolog 4-like [Momordica charantia]2.0e-3698.81Show/hide
Query:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
        GGSAGKRVGSGS GGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
Subjt:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA

XP_027088546.1 beta-amylase 7-like [Coffea arabica]5.5e-2675Show/hide
Query:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
        GG+  +R  SG GGGG +RS  EKE+TK+RERQRR+ITT IFHGLRKHGGY LSPRADIN+VLR LA+EAGWIV PDGTTYRS+
Subjt:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA

XP_028759331.1 beta-amylase 7-like [Prosopis alba]4.1e-2987.67Show/hide
Query:  GSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRS
        GSGGGGG RSE++KEKT+MRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLR+LA EAGW++HPDGTTYR+
Subjt:  GSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRS

TrEMBL top hitse value%identityAlignment
A0A068V9J3 BES1_N domain-containing protein2.7e-2675Show/hide
Query:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
        GG+  +R  SG GGGG +RS  EKE+TK+RERQRR+ITT IFHGLRKHGGY LSPRADIN+VLR LA+EAGWIV PDGTTYRS+
Subjt:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA

A0A5N6QCI0 BES1_N domain-containing protein2.0e-2680.49Show/hide
Query:  KRVGSGSGGGGGV----RSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRS
        K VG  +   GGV    R+E+EKEKTKMRERQRRAITTNIFHGLRK+GGYRLSPRADINEVLRELAKEAGW+V PDGTTYRS
Subjt:  KRVGSGSGGGGGV----RSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRS

A0A6J1CE67 protein BZR1 homolog 4-like9.7e-3798.81Show/hide
Query:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
        GGSAGKRVGSGS GGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
Subjt:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA

A0A6P6U8G4 beta-amylase 7-like2.7e-2675Show/hide
Query:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
        GG+  +R  SG GGGG +RS  EKE+TK+RERQRR+ITT IFHGLRKHGGY LSPRADIN+VLR LA+EAGWIV PDGTTYRS+
Subjt:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA

A0A6P6UED6 beta-amylase 7-like2.7e-2675Show/hide
Query:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
        GG+  +R  SG GGGG +RS  EKE+TK+RERQRR+ITT IFHGLRKHGGY LSPRADIN+VLR LA+EAGWIV PDGTTYRS+
Subjt:  GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA

SwissProt top hitse value%identityAlignment
O80831 Beta-amylase 79.7e-1863.01Show/hide
Query:  GGGGGVRSE--TEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRS
        GGGG  RS    EKE+TK+RER RRAIT  I  GLR+HG Y L  RADIN+V+  LA+EAGW+V PDGTT+ S
Subjt:  GGGGGVRSE--TEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRS

Q0JPT4 Protein BZR1 homolog 25.3e-1654.02Show/hide
Query:  GGSAGKRVGSGSGG-----GGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYR
        GG  G  VG G+G      GG + +  E+E  K RER+RRAI   IF GLR HGGY+L    D NEVL+ L  EAGW+V PDGTTYR
Subjt:  GGSAGKRVGSGSGG-----GGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYR

Q5Z9E5 Protein BZR1 homolog 32.2e-1455.26Show/hide
Query:  GSGSGGGGGVRSET--EKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYR
        G G GG GG R  T  E+E  + RER+RRAI   I+ GLR +G Y L    D NEVL+ L  EAGW V PDGTTYR
Subjt:  GSGSGGGGGVRSET--EKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYR

Q94A43 BES1/BZR1 homolog protein 21.7e-1455.13Show/hide
Query:  GSGSGGGGGVRSET----EKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYR
        G G GGGG     T    E+E  K RER+RRAIT  I+ GLR  G Y+L    D NEVL+ L  EAGWIV  DGTTYR
Subjt:  GSGSGGGGGVRSET----EKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYR

Q9FH80 Beta-amylase 88.2e-1755.29Show/hide
Query:  GGSAGKRVGSGSGGGGGVRS-ETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
        GG  G   G G GGG G R  E EKE+TK+RER RRAIT+ +  GLR++G + L  RAD+N+V+  LA+EAGW V  DGTTYR +
Subjt:  GGSAGKRVGSGSGGGGGVRS-ETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA

Arabidopsis top hitse value%identityAlignment
AT1G78700.1 BES1/BZR1 homolog 42.7e-1558.82Show/hide
Query:  GVRSET--EKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYR
        G R  T  E+E  K RER+RRAI   IF GLR +G Y L    D NEVL+ L  EAGWIV PDGTTYR
Subjt:  GVRSET--EKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYR

AT2G45880.1 beta-amylase 76.9e-1963.01Show/hide
Query:  GGGGGVRSE--TEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRS
        GGGG  RS    EKE+TK+RER RRAIT  I  GLR+HG Y L  RADIN+V+  LA+EAGW+V PDGTT+ S
Subjt:  GGGGGVRSE--TEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRS

AT4G36780.1 BES1/BZR1 homolog 21.2e-1555.13Show/hide
Query:  GSGSGGGGGVRSET----EKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYR
        G G GGGG     T    E+E  K RER+RRAIT  I+ GLR  G Y+L    D NEVL+ L  EAGWIV  DGTTYR
Subjt:  GSGSGGGGGVRSET----EKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYR

AT5G45300.1 beta-amylase 25.9e-1855.29Show/hide
Query:  GGSAGKRVGSGSGGGGGVRS-ETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
        GG  G   G G GGG G R  E EKE+TK+RER RRAIT+ +  GLR++G + L  RAD+N+V+  LA+EAGW V  DGTTYR +
Subjt:  GGSAGKRVGSGSGGGGGVRS-ETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA

AT5G45300.2 beta-amylase 25.9e-1855.29Show/hide
Query:  GGSAGKRVGSGSGGGGGVRS-ETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA
        GG  G   G G GGG G R  E EKE+TK+RER RRAIT+ +  GLR++G + L  RAD+N+V+  LA+EAGW V  DGTTYR +
Subjt:  GGSAGKRVGSGSGGGGGVRS-ETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTGGGTCGGCCGGAAAAAGAGTCGGGTCGGGTTCTGGCGGCGGCGGAGGAGTGAGAAGTGAGACTGAGAAAGAGAAGACAAAGATGAGAGAACGGCAAAGACGAGCCAT
CACCACTAATATCTTCCATGGCCTTAGAAAGCACGGCGGCTACCGCCTCTCCCCAAGAGCTGATATCAATGAAGTCCTCCGTGAGCTCGCCAAGGAGGCCGGCTGGATCG
TCCACCCCGACGGCACCACCTACCGCTCCGCC
mRNA sequenceShow/hide mRNA sequence
GGTGGGTCGGCCGGAAAAAGAGTCGGGTCGGGTTCTGGCGGCGGCGGAGGAGTGAGAAGTGAGACTGAGAAAGAGAAGACAAAGATGAGAGAACGGCAAAGACGAGCCAT
CACCACTAATATCTTCCATGGCCTTAGAAAGCACGGCGGCTACCGCCTCTCCCCAAGAGCTGATATCAATGAAGTCCTCCGTGAGCTCGCCAAGGAGGCCGGCTGGATCG
TCCACCCCGACGGCACCACCTACCGCTCCGCC
Protein sequenceShow/hide protein sequence
GGSAGKRVGSGSGGGGGVRSETEKEKTKMRERQRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWIVHPDGTTYRSA