; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013439 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013439
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionX8 domain-containing protein
Genome locationscaffold402:1538950..1539791
RNA-Seq ExpressionMS013439
SyntenyMS013439
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573386.1 Glucan endo-1,3-beta-glucosidase 13, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5678.91Show/hide
Query:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT
        EKAEA+MP TT SPPEGNTTFLDGTSWCVA+ G SQIDLQNALDWACGLGKADCRAIQKGG CYQPDTL SHASYAFNS+YQQNGNSDIACNFGGSATLT
Subjt:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT

Query:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYL
        K++PS      S S S +SA SK K NG H  L+L+ GILMV+NLYL
Subjt:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYL

XP_022140209.1 major pollen allergen Ole e 10 [Momordica charantia]8.3e-7093.96Show/hide
Query:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT
        EKAEAAMPATTLSPPEGN TFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT
Subjt:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT

Query:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS
        KKNPS      S S SVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS
Subjt:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS

XP_022955069.1 glucan endo-1,3-beta-glucosidase 13-like [Cucurbita moschata]2.4e-5678.91Show/hide
Query:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT
        EKAEA+MP TT SPPEGNTTFLDGTSWCVA+ G SQIDLQNALDWACGLGKADCRAIQKGG CYQPDTL SHASYAFNS+YQQNGNSDIACNFGGSATLT
Subjt:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT

Query:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYL
        K++PS      S S S +SA SK K NG H  L+LV GI MV+NLYL
Subjt:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYL

XP_022994908.1 major pollen allergen Ole e 10-like [Cucurbita maxima]9.6e-5879.19Show/hide
Query:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT
        EKAEA+MP TT SPPEGNTTFLDGTSWCVA+ G SQIDLQNALDWACGLGKADCRAIQKGG CYQPDTL SHASYAFNS+YQQNGNSDIACNFGGSATLT
Subjt:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT

Query:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS
        K++PS      S S S +SA SK K NGS  CL+LV GI MV+NLY GS
Subjt:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS

XP_038895270.1 major pollen allergen Ole e 10 [Benincasa hispida]1.8e-5677.18Show/hide
Query:  AEAAMPATT--LSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT
        AEA M  TT  ++PPEGNTTFLDGTSWCVA+AGASQIDLQNALDWACGLGKADCRAIQKGG CYQPDTLLSHASYAFNS+YQQNGNSDIACNFGG ATLT
Subjt:  AEAAMPATT--LSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT

Query:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS
        K NPS      S S S +SA SK KN+ SH+CL+L+ G+ M+LNLY GS
Subjt:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS

TrEMBL top hitse value%identityAlignment
A0A1S3BB84 glucan endo-1,3-beta-glucosidase 132.6e-5373.47Show/hide
Query:  AEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKK
        AEA MP    +P EGNTTF+DGT+WCVA+ G SQIDLQNALDWACG+GKADCRAIQKGG CY+PDTLLSHASYAFNS+YQQNGNSDIACNFGG ATLTKK
Subjt:  AEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKK

Query:  NPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS
        +PS      S S S NSA SK KN+ SH+CL+L++G+ +VLNLY GS
Subjt:  NPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS

A0A6J1AK05 glucan endo-1,3-beta-glucosidase 132.2e-4786.67Show/hide
Query:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT
        EKAEAA+P TTLSPPEGNTTFLDGT+WCVA AG SQIDLQNALDWACGLG ADC+AIQ+GG CY+PDTL+SHASYAFN++YQQNGNSDIACNFGG+ATLT
Subjt:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT

Query:  KKNPS
        KKNPS
Subjt:  KKNPS

A0A6J1CF38 major pollen allergen Ole e 104.0e-7093.96Show/hide
Query:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT
        EKAEAAMPATTLSPPEGN TFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT
Subjt:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT

Query:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS
        KKNPS      S S SVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS
Subjt:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS

A0A6J1GUW0 glucan endo-1,3-beta-glucosidase 13-like1.1e-5678.91Show/hide
Query:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT
        EKAEA+MP TT SPPEGNTTFLDGTSWCVA+ G SQIDLQNALDWACGLGKADCRAIQKGG CYQPDTL SHASYAFNS+YQQNGNSDIACNFGGSATLT
Subjt:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT

Query:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYL
        K++PS      S S S +SA SK K NG H  L+LV GI MV+NLYL
Subjt:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYL

A0A6J1K6E1 major pollen allergen Ole e 10-like4.6e-5879.19Show/hide
Query:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT
        EKAEA+MP TT SPPEGNTTFLDGTSWCVA+ G SQIDLQNALDWACGLGKADCRAIQKGG CYQPDTL SHASYAFNS+YQQNGNSDIACNFGGSATLT
Subjt:  EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLT

Query:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS
        K++PS      S S S +SA SK K NGS  CL+LV GI MV+NLY GS
Subjt:  KKNPSKISLPLS-SFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS

SwissProt top hitse value%identityAlignment
P52409 Glucan endo-1,3-beta-glucosidase3.1e-1945.1Show/hide
Query:  AAMPATTLSP-PEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKN
        A  P+   SP P        G  WCVA+ GA+  DLQN +++ACG    DC+ IQ GGAC+ P++L +HASY  N++YQ NG++D+AC+F G+  +T  +
Subjt:  AAMPATTLSP-PEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKN

Query:  PS
        PS
Subjt:  PS

Q8VYE5 Glucan endo-1,3-beta-glucosidase 125.7e-2148.11Show/hide
Query:  PATTLSP-PEGNTTFLDG-------TSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATL
        P+ + SP   GN+T   G         WC+A + AS  +LQ ALDWACG G  DC A+Q    C++PDT+LSHASYAFN++YQQ+G S I C+F G++  
Subjt:  PATTLSP-PEGNTTFLDG-------TSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATL

Query:  TKKNPS
          K+PS
Subjt:  TKKNPS

Q9C7U5 Glucan endo-1,3-beta-glucosidase 21.8e-1952.5Show/hide
Query:  SWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS
        ++C AR GA    LQ ALDWACG GK DC  I++G  CY+PD +++HA+YAF+++Y Q GN+  ACNF G A++T  +PS
Subjt:  SWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS

Q9FJU9 Glucan endo-1,3-beta-glucosidase 131.0e-2251.61Show/hide
Query:  SPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS
        S   G  +     SWC+A + AS+ DL+ ALDWACG G  DC AIQ    C+QPDTL+SHAS+ FNS++QQN  +D+AC+FGG+     K+PS
Subjt:  SPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS

Q9M069 Glucan endo-1,3-beta-glucosidase 71.3e-1743Show/hide
Query:  AMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS
        A  +++   P G  T    + WCV + GA+  +LQ +LDWACG G  DC AIQ GGAC++P+ ++SHA+YA N ++Q++      C+F  +AT+T +NPS
Subjt:  AMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS

Arabidopsis top hitse value%identityAlignment
AT1G09460.1 Carbohydrate-binding X8 domain superfamily protein1.6e-2353Show/hide
Query:  MPATTLSPP-EGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS
        +P   ++PP   N+  + G SWCVA+ GASQ+ LQ ALD+ACG+  ADC  +Q+GG CY P +L SHAS+AFNS+YQ+N  S  +C+FGG+A+L   NPS
Subjt:  MPATTLSPP-EGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS

AT1G29380.1 Carbohydrate-binding X8 domain superfamily protein5.6e-2456.84Show/hide
Query:  WCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLSSFSVNSATS
        WC+A+A AS   LQ ALD+ACG G ADC  IQ+G ACY+P+T+  HAS+AFNS+YQ++  SD +CNFGG+A LT  +PSK S   SS S   +TS
Subjt:  WCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLSSFSVNSATS

AT4G05430.1 Carbohydrate-binding X8 domain superfamily protein2.4e-3560.18Show/hide
Query:  TLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS--KIS
        +L  P+GNTTFL+GT+WCVAR GA+Q +LQ ALDWACG+G+ DC  I++ G CY+PDT++SHAS+AFN++YQ NGN+ IAC FGG+AT TK NPS  K S
Subjt:  TLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS--KIS

Query:  LPLSSFSVNSATS
           S   V++A S
Subjt:  LPLSSFSVNSATS

AT4G29360.2 O-Glycosyl hydrolases family 17 protein1.4e-2245.6Show/hide
Query:  PATTLSP-PEGNTTFLDG-------TSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATL
        P+ + SP   GN+T   G         WC+A + AS  +LQ ALDWACG G  DC A+Q    C++PDT+LSHASYAFN++YQQ+G S I C+F G++  
Subjt:  PATTLSP-PEGNTTFLDG-------TSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATL

Query:  TKKNPSKISLPLSSFSVNSATSKLK
          K+PSK  L   +F   S  S +K
Subjt:  TKKNPSKISLPLSSFSVNSATSKLK

AT5G56590.1 O-Glycosyl hydrolases family 17 protein7.4e-2451.61Show/hide
Query:  SPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS
        S   G  +     SWC+A + AS+ DL+ ALDWACG G  DC AIQ    C+QPDTL+SHAS+ FNS++QQN  +D+AC+FGG+     K+PS
Subjt:  SPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAAGGCGGAGGCAGCAATGCCAGCGACGACATTGTCGCCACCAGAAGGGAACACGACGTTCCTTGATGGAACGTCGTGGTGCGTGGCTCGGGCCGGGGCGTCTCAGAT
CGATCTGCAGAACGCGTTGGACTGGGCGTGTGGATTGGGAAAGGCAGATTGTAGAGCCATTCAGAAGGGAGGGGCTTGTTATCAACCAGACACACTCTTGTCCCATGCAT
CTTATGCATTCAATAGCTTCTATCAGCAGAATGGCAACTCTGATATTGCTTGCAATTTTGGTGGCTCTGCTACTTTAACCAAAAAAAATCCAAGTAAAATCTCCCTCCCT
CTCTCTTCATTTTCAGTGAACTCAGCAACTTCAAAGTTGAAGAACAATGGAAGCCATGTGTGCCTGAGGTTGGTTGCTGGAATTTTGATGGTGTTGAATTTATATTTAGG
AAGC
mRNA sequenceShow/hide mRNA sequence
GAGAAGGCGGAGGCAGCAATGCCAGCGACGACATTGTCGCCACCAGAAGGGAACACGACGTTCCTTGATGGAACGTCGTGGTGCGTGGCTCGGGCCGGGGCGTCTCAGAT
CGATCTGCAGAACGCGTTGGACTGGGCGTGTGGATTGGGAAAGGCAGATTGTAGAGCCATTCAGAAGGGAGGGGCTTGTTATCAACCAGACACACTCTTGTCCCATGCAT
CTTATGCATTCAATAGCTTCTATCAGCAGAATGGCAACTCTGATATTGCTTGCAATTTTGGTGGCTCTGCTACTTTAACCAAAAAAAATCCAAGTAAAATCTCCCTCCCT
CTCTCTTCATTTTCAGTGAACTCAGCAACTTCAAAGTTGAAGAACAATGGAAGCCATGTGTGCCTGAGGTTGGTTGCTGGAATTTTGATGGTGTTGAATTTATATTTAGG
AAGC
Protein sequenceShow/hide protein sequence
EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLP
LSSFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS