; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013461 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013461
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionsignal recognition particle 14 kDa protein
Genome locationscaffold402:1704021..1705179
RNA-Seq ExpressionMS013461
SyntenyMS013461
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0007186 - G protein-coupled receptor signaling pathway (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0008312 - 7S RNA binding (molecular function)
GO:0030942 - endoplasmic reticulum signal peptide binding (molecular function)
InterPro domainsIPR003210 - Signal recognition particle, SRP14 subunit
IPR009018 - Signal recognition particle, SRP9/SRP14 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66307.2 hypothetical protein Csa_023187 [Cucumis sativus]2.4e-4894.02Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERK+K
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEKDPKKKPKKV
        KKA  AEK  KKKP+KV
Subjt:  KKAPAAEKDPKKKPKKV

XP_022140158.1 signal recognition particle 14 kDa protein [Momordica charantia]7.3e-53100Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEKDPKKKPKKV
        KKAPAAEKDPKKKPKKV
Subjt:  KKAPAAEKDPKKKPKKV

XP_022954536.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata]5.8e-5094.87Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERK++
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEKDPKKKPKKV
        KKAP AEKD KKKP+KV
Subjt:  KKAPAAEKDPKKKPKKV

XP_038893989.1 signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida]2.9e-4994.87Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERK+K
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEKDPKKKPKKV
        KKAP AEK  KKKP+KV
Subjt:  KKAPAAEKDPKKKPKKV

XP_038893990.1 signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida]2.9e-4994.87Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERK+K
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEKDPKKKPKKV
        KKAP AEK  KKKP+KV
Subjt:  KKAPAAEKDPKKKPKKV

TrEMBL top hitse value%identityAlignment
A0A5A7UG42 Signal recognition particle 14 kDa protein1.2e-4894.02Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERK+K
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEKDPKKKPKKV
        KKA  AEK  KKKP+KV
Subjt:  KKAPAAEKDPKKKPKKV

A0A6J1CHD5 signal recognition particle 14 kDa protein3.5e-53100Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEKDPKKKPKKV
        KKAPAAEKDPKKKPKKV
Subjt:  KKAPAAEKDPKKKPKKV

A0A6J1GR82 signal recognition particle 14 kDa protein-like isoform X12.8e-5094.87Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERK++
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEKDPKKKPKKV
        KKAP AEKD KKKP+KV
Subjt:  KKAPAAEKDPKKKPKKV

A0A6J1K2P1 signal recognition particle 14 kDa protein-like isoform X12.8e-5094.87Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERK++
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEKDPKKKPKKV
        KKAP AEKD KKKP+KV
Subjt:  KKAPAAEKDPKKKPKKV

A0A6J1KGP7 signal recognition particle 14 kDa protein-like isoform X11.2e-4894.02Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERK+K
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEKDPKKKPKKV
        KKA  AEK  KKKP+KV
Subjt:  KKAPAAEKDPKKKPKKV

SwissProt top hitse value%identityAlignment
O04421 Signal recognition particle 14 kDa protein1.6e-4282.41Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRATDGKKT+STSVGAKDH +FQASY+TILKAHMTALKKRERK++
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEK
        KK+  AEK
Subjt:  KKAPAAEK

O04433 Signal recognition particle 14 kDa protein2.2e-3668.97Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        V+LQ DPFL+ELTSM+ERSTEKGSVWVT+KRSS+K + +  KM   G+ +EYRCL+RATDGKK I T++ AK++LKFQASY+T+LKAHM ALKKRERK+K
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEKDPKKKPKK
        KKA   EK P+K PKK
Subjt:  KKAPAAEKDPKKKPKK

P37108 Signal recognition particle 14 kDa protein8.8e-1746.73Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKE
        VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RATDGKK IST V +K+  KFQ +YS +L+A+M  LKKR++K 
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKE

Query:  KKKAPAA
        K K   A
Subjt:  KKKAPAA

Q4R5C7 Signal recognition particle 14 kDa protein8.8e-1746.73Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKE
        VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RATDGKK IST V +K+  KFQ +YS +L+A+M  LKKR++K 
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKE

Query:  KKKAPAA
        K K   A
Subjt:  KKKAPAA

Q5RBX7 Signal recognition particle 14 kDa protein8.8e-1746.73Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKE
        VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RATDGKK IST V +K+  KFQ +YS +L+A+M  LKKR++K 
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKE

Query:  KKKAPAA
        K K   A
Subjt:  KKKAPAA

Arabidopsis top hitse value%identityAlignment
AT2G43640.1 Signal recognition particle, SRP9/SRP14 subunit1.1e-4382.41Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRATDGKKT+STSVGAKDH +FQASY+TILKAHMTALKKRERK++
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEK
        KK+  AEK
Subjt:  KKAPAAEK

AT2G43640.2 Signal recognition particle, SRP9/SRP14 subunit1.1e-4382.41Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRATDGKKT+STSVGAKDH +FQASY+TILKAHMTALKKRERK++
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEK
        KK+  AEK
Subjt:  KKAPAAEK

AT2G43640.3 Signal recognition particle, SRP9/SRP14 subunit1.5e-3573.15Show/hide
Query:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK
        VLLQLDPFLNELTSMFE+S EK         +SLKSKVQ+ K+++ G+ IEYRCLIRATDGKKT+STSVGAKDH +FQASY+TILKAHMTALKKRERK++
Subjt:  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEK

Query:  KKAPAAEK
        KK+  AEK
Subjt:  KKAPAAEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCTATTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGCACCGAGAAGGGCTCTGTGTGGGTTACTCTGAAACGATCATCACTGAAGTCTAA
GGTGCAGAGAAATAAAATGACCACTGCCGGGCAACCTATTGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGACAATTTCTACTTCAGTTGGGGCAAAAGATC
ACCTGAAATTTCAAGCTTCCTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGGGAGAGGAAGGAGAAGAAGAAGGCACCAGCGGCAGAGAAGGATCCC
AAGAAAAAACCCAAGAAAGTA
mRNA sequenceShow/hide mRNA sequence
GTTCTATTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGCACCGAGAAGGGCTCTGTGTGGGTTACTCTGAAACGATCATCACTGAAGTCTAA
GGTGCAGAGAAATAAAATGACCACTGCCGGGCAACCTATTGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGACAATTTCTACTTCAGTTGGGGCAAAAGATC
ACCTGAAATTTCAAGCTTCCTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGGGAGAGGAAGGAGAAGAAGAAGGCACCAGCGGCAGAGAAGGATCCC
AAGAAAAAACCCAAGAAAGTA
Protein sequenceShow/hide protein sequence
VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKEKKKAPAAEKDP
KKKPKKV