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MS013471 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013471
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein TIFY 5A
Genome locationscaffold402:1778380..1778882
RNA-Seq ExpressionMS013471
SyntenyMS013471
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR010399 - Tify domain
IPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583892.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia]6.8e-4272.54Show/hide
Query:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGD---QQPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-
        MAVLP+SME+NCNLELRLSPSTSFS  DSGD    QPRLH FL +ESSKN  QQMTIFYNGRVCV DFTE+QARAII LATRH + E++  RR+ LE S 
Subjt:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGD---QQPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-

Query:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH
        SPEQ N   G+G  SG+SMK+SLQRFLQKRK+R+QSASPY+H
Subjt:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH

XP_022139826.1 protein TIFY 5A [Momordica charantia]5.0e-6999.27Show/hide
Query:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESSKNPQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQT
        MAVLPVSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESSKNPQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTK EKTTCRRQTLEPSSPEQT
Subjt:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESSKNPQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQT

Query:  NSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH
        NSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH
Subjt:  NSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH

XP_022927242.1 protein TIFY 5A-like [Cucurbita moschata]1.4e-4273.24Show/hide
Query:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGD---QQPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-
        MAVLP+SME+NCNLELRLSPSTSFS  DSGD    QPRLH FL +ESSKN  QQMTIFYNGRVCV DFTE+QARAIIMLATRH + E++  RR+ LE S 
Subjt:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGD---QQPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-

Query:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH
        SPEQ N   G+G  SG+SMK+SLQRFLQKRK+R+QSASPY+H
Subjt:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH

XP_023001485.1 protein TIFY 5A-like [Cucurbita maxima]2.6e-4171.83Show/hide
Query:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGDQ---QPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-
        M VLP+SME+NCNLELRLSPSTSFS  DSGD+   QPRLH FL +ESSKN  QQMTIFYNGRVCV DFTE+QARAIIMLATRH + E++  R + LE S 
Subjt:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGDQ---QPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-

Query:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH
        SPEQ N   G+G  SG+SMK+SLQRFLQKRK+R+QSASPY+H
Subjt:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH

XP_023520178.1 protein TIFY 5A-like [Cucurbita pepo subsp. pepo]2.3e-4272.54Show/hide
Query:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGD---QQPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-
        MAVLP+SME++CNLELRLSPSTSFS  DSGD    QPRLH FL +ESSKN  QQMTIFYNGRVCVGDFTE+QARAIIMLATRH + E++  RR+ LE S 
Subjt:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGD---QQPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-

Query:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH
        SPE+ N   G+G  SG+SMK+SLQRFLQKRK+R+QSASPY+H
Subjt:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH

TrEMBL top hitse value%identityAlignment
A0A0A0LXJ5 Tify domain-containing protein1.5e-3159.33Show/hide
Query:  MAVLPVSMERNCNLELRLSPSTS-FSGH--DSGDQQPRLHHFL--GEESSKNP-QQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEP
        MA+LPVS++ NCNLELRLSPS+S F  H        P LHHFL   +E +KN  QQMTIFYNGRVCV DFTE+QA+AIIMLA+R  +   T    +   P
Subjt:  MAVLPVSMERNCNLELRLSPSTS-FSGH--DSGDQQPRLHHFL--GEESSKNP-QQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEP

Query:  S-SPEQTN------SGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH
        S SP+Q +      S +G+GS SG+SMK+SLQRFLQKRK+RIQSASPY+H
Subjt:  S-SPEQTN------SGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH

A0A6J1CDV5 protein TIFY 5A2.4e-6999.27Show/hide
Query:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESSKNPQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQT
        MAVLPVSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESSKNPQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTK EKTTCRRQTLEPSSPEQT
Subjt:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESSKNPQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQT

Query:  NSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH
        NSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH
Subjt:  NSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH

A0A6J1EGL8 protein TIFY 5A-like6.6e-4373.24Show/hide
Query:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGD---QQPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-
        MAVLP+SME+NCNLELRLSPSTSFS  DSGD    QPRLH FL +ESSKN  QQMTIFYNGRVCV DFTE+QARAIIMLATRH + E++  RR+ LE S 
Subjt:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGD---QQPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-

Query:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH
        SPEQ N   G+G  SG+SMK+SLQRFLQKRK+R+QSASPY+H
Subjt:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH

A0A6J1JX98 protein TIFY 5A-like2.4e-3264.29Show/hide
Query:  MAVLPVSMERNCNLELRLSPST-SFSGHDSGD---QQPRLHHFLGEESSKNP-QQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS
        MAVLP+ ME+NCNLEL LS S+ + S HDSGD     P LH FL +ESSKN  QQMTIFYNGRVCV DFTE+QARAIIMLATR     ++T RR   EP 
Subjt:  MAVLPVSMERNCNLELRLSPST-SFSGHDSGD---QQPRLHHFLGEESSKNP-QQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS

Query:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPY
          E        GS SG+SMK+SLQRFL KRK+RIQSASPY
Subjt:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPY

A0A6J1KLB7 protein TIFY 5A-like1.3e-4171.83Show/hide
Query:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGDQ---QPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-
        M VLP+SME+NCNLELRLSPSTSFS  DSGD+   QPRLH FL +ESSKN  QQMTIFYNGRVCV DFTE+QARAIIMLATRH + E++  R + LE S 
Subjt:  MAVLPVSMERNCNLELRLSPSTSFSGHDSGDQ---QPRLHHFLGEESSKN-PQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPS-

Query:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH
        SPEQ N   G+G  SG+SMK+SLQRFLQKRK+R+QSASPY+H
Subjt:  SPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYHH

SwissProt top hitse value%identityAlignment
A2XSX6 Protein TIFY 93.7e-0638.82Show/hide
Query:  MTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPY
        MT+FYNG V V D + ++A AI+ +AT  TKA+               + N+  G  +   ++  KSLQRFL KRK R+ S  PY
Subjt:  MTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPY

O64687 Protein TIFY 5B1.9e-1037.41Show/hide
Query:  VSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESS-------KNPQQMTIFYNGRVCV-GDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSP
        + M+  C+LELRL  S+    +DS       H  L E SS       +  Q +TIFYNG +CV  D T  +A AI+ LA+R  + +  + R  + + S P
Subjt:  VSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESS-------KNPQQMTIFYNGRVCV-GDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSP

Query:  EQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYH
            + +        SMK+SL  FLQKR  RIQ+ SPYH
Subjt:  EQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYH

Q7XV97 Protein TIFY 93.7e-0638.82Show/hide
Query:  MTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPY
        MT+FYNG V V D + ++A AI+ +AT  TKA+               + N+  G  +   ++  KSLQRFL KRK R+ S  PY
Subjt:  MTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPY

Q8LBM2 Protein TIFY 5A1.5e-1240.71Show/hide
Query:  VSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESSKNP------QQMTIFYNGRVCV-GDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPE
        + +++NC+LELRL P TS+   DS D        +   SS NP      Q++TIFYNG++C   D T  QAR+II +A+R  K + ++        S P 
Subjt:  VSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESSKNP------QQMTIFYNGRVCV-GDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPE

Query:  QTNSGAGAGSVSG--ISMKKSLQRFLQKRKHRIQSASPYH
          ++      +     SMKKSLQ FLQKRK RIQ+ SPYH
Subjt:  QTNSGAGAGSVSG--ISMKKSLQRFLQKRKHRIQSASPYH

Q93ZM9 Protein TIFY 95.9e-0434.83Show/hide
Query:  MTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQTNSGAGAGSVSG---ISMKKSLQRFLQKRKHRIQSASPYH
        MTIFYNG V V   +  +A  I+ +A      +  +     L    P          ++ G   I+ +KSLQRFL+KRK R+ S SPY+
Subjt:  MTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQTNSGAGAGSVSG---ISMKKSLQRFLQKRKHRIQSASPYH

Arabidopsis top hitse value%identityAlignment
AT1G19180.1 jasmonate-zim-domain protein 16.0e-0433Show/hide
Query:  MTIFYNGRVCV-GDFTEEQARAIIMLATRHT-----------KAEKTTCRRQTLEP---SSPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPY
        +TIFY G+V V  DF+ E+A+ +I LA++ T           ++   T   Q   P   ++ E   S     +   I+ + SL RFL+KRK R+ S +PY
Subjt:  MTIFYNGRVCV-GDFTEEQARAIIMLATRHT-----------KAEKTTCRRQTLEP---SSPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPY

AT1G19180.2 jasmonate-zim-domain protein 16.0e-0433Show/hide
Query:  MTIFYNGRVCV-GDFTEEQARAIIMLATRHT-----------KAEKTTCRRQTLEP---SSPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPY
        +TIFY G+V V  DF+ E+A+ +I LA++ T           ++   T   Q   P   ++ E   S     +   I+ + SL RFL+KRK R+ S +PY
Subjt:  MTIFYNGRVCV-GDFTEEQARAIIMLATRHT-----------KAEKTTCRRQTLEP---SSPEQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPY

AT1G30135.1 jasmonate-zim-domain protein 81.1e-1340.71Show/hide
Query:  VSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESSKNP------QQMTIFYNGRVCV-GDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPE
        + +++NC+LELRL P TS+   DS D        +   SS NP      Q++TIFYNG++C   D T  QAR+II +A+R  K + ++        S P 
Subjt:  VSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESSKNP------QQMTIFYNGRVCV-GDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPE

Query:  QTNSGAGAGSVSG--ISMKKSLQRFLQKRKHRIQSASPYH
          ++      +     SMKKSLQ FLQKRK RIQ+ SPYH
Subjt:  QTNSGAGAGSVSG--ISMKKSLQRFLQKRKHRIQSASPYH

AT2G34600.1 jasmonate-zim-domain protein 71.3e-1137.41Show/hide
Query:  VSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESS-------KNPQQMTIFYNGRVCV-GDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSP
        + M+  C+LELRL  S+    +DS       H  L E SS       +  Q +TIFYNG +CV  D T  +A AI+ LA+R  + +  + R  + + S P
Subjt:  VSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESS-------KNPQQMTIFYNGRVCV-GDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSP

Query:  EQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYH
            + +        SMK+SL  FLQKR  RIQ+ SPYH
Subjt:  EQTNSGAGAGSVSGISMKKSLQRFLQKRKHRIQSASPYH

AT5G13220.1 jasmonate-zim-domain protein 104.2e-0534.83Show/hide
Query:  MTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQTNSGAGAGSVSG---ISMKKSLQRFLQKRKHRIQSASPYH
        MTIFYNG V V   +  +A  I+ +A      +  +     L    P          ++ G   I+ +KSLQRFL+KRK R+ S SPY+
Subjt:  MTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQTNSGAGAGSVSG---ISMKKSLQRFLQKRKHRIQSASPYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCTGCCCGTCTCCATGGAGCGCAACTGCAACTTGGAACTTCGTCTCTCTCCCTCTACTTCTTTCTCCGGCCACGATTCCGGCGACCAACAGCCCCGCCTTCA
CCACTTCTTGGGTGAAGAATCGAGCAAAAATCCGCAACAGATGACTATTTTCTACAATGGAAGAGTTTGTGTTGGCGATTTTACAGAGGAACAGGCTAGAGCCATAATAA
TGCTGGCGACCAGACATACGAAGGCGGAGAAGACGACATGTCGTCGACAGACATTGGAACCGTCGTCGCCGGAGCAGACTAATTCTGGAGCCGGAGCTGGTTCTGTTTCA
GGGATCTCTATGAAGAAATCTTTACAGAGGTTTTTGCAGAAAAGGAAGCATCGGATTCAATCTGCTTCTCCCTACCATCAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCTGCCCGTCTCCATGGAGCGCAACTGCAACTTGGAACTTCGTCTCTCTCCCTCTACTTCTTTCTCCGGCCACGATTCCGGCGACCAACAGCCCCGCCTTCA
CCACTTCTTGGGTGAAGAATCGAGCAAAAATCCGCAACAGATGACTATTTTCTACAATGGAAGAGTTTGTGTTGGCGATTTTACAGAGGAACAGGCTAGAGCCATAATAA
TGCTGGCGACCAGACATACGAAGGCGGAGAAGACGACATGTCGTCGACAGACATTGGAACCGTCGTCGCCGGAGCAGACTAATTCTGGAGCCGGAGCTGGTTCTGTTTCA
GGGATCTCTATGAAGAAATCTTTACAGAGGTTTTTGCAGAAAAGGAAGCATCGGATTCAATCTGCTTCTCCCTACCATCAT
Protein sequenceShow/hide protein sequence
MAVLPVSMERNCNLELRLSPSTSFSGHDSGDQQPRLHHFLGEESSKNPQQMTIFYNGRVCVGDFTEEQARAIIMLATRHTKAEKTTCRRQTLEPSSPEQTNSGAGAGSVS
GISMKKSLQRFLQKRKHRIQSASPYHH