; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013475 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013475
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein TIFY 5A-like
Genome locationscaffold402:1812104..1812528
RNA-Seq ExpressionMS013475
SyntenyMS013475
Gene Ontology termsNA
InterPro domainsIPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019513.1 Protein TIFY 5A [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1755.93Show/hide
Query:  QHTLHCNLELCLSPPPAPPSSATA-AESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEEK-------SSSMKRSL
        ++ L+CNLELCLSPP + PS+ATA A ST+TS  +H  P        P+ D TELQARAII+ AT QM  E R TTC   S  ++       S SM+RSL
Subjt:  QHTLHCNLELCLSPPPAPPSSATA-AESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEEK-------SSSMKRSL

Query:  QRFLQKRKHRIQTLTPYT
        QRFLQKRKHRIQTL+PY+
Subjt:  QRFLQKRKHRIQTLTPYT

XP_022140147.1 protein TIFY 5A-like [Momordica charantia]6.3e-54100Show/hide
Query:  MEPQHTLHCNLELCLSPPPAPPSSATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQMEERKTTCRTRSAEEKSSSMKRSLQRFLQKR
        MEPQHTLHCNLELCLSPPPAPPSSATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQMEERKTTCRTRSAEEKSSSMKRSLQRFLQKR
Subjt:  MEPQHTLHCNLELCLSPPPAPPSSATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQMEERKTTCRTRSAEEKSSSMKRSLQRFLQKR

Query:  KHRIQTLTPYTT
        KHRIQTLTPYTT
Subjt:  KHRIQTLTPYTT

XP_023001493.1 protein TIFY 5A-like [Cucurbita maxima]2.1e-1755.93Show/hide
Query:  QHTLHCNLELCLSPPPAPPS-SATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEE-------KSSSMKRSL
        ++ L+CNLELCLSPP + PS +AT A + +TSTS H+HP        P+ DLTELQARAII+ A  QM  E R TTC      E        S SM+RSL
Subjt:  QHTLHCNLELCLSPPPAPPS-SATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEE-------KSSSMKRSL

Query:  QRFLQKRKHRIQTLTPYT
        QRFLQKRKHRIQTL+PY+
Subjt:  QRFLQKRKHRIQTLTPYT

XP_023520316.1 protein TIFY 5A-like [Cucurbita pepo subsp. pepo]1.1e-1856.78Show/hide
Query:  QHTLHCNLELCLSPPPAPPSSATA-AESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEEK-------SSSMKRSL
        ++ L+CNLELCLSPP + PS+ATA A ST+TS  +H  P        P+ DLTELQARAII+ AT QM  E R TTC   S +++       S SM+RSL
Subjt:  QHTLHCNLELCLSPPPAPPSSATA-AESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEEK-------SSSMKRSL

Query:  QRFLQKRKHRIQTLTPYT
        QRFLQKRKHRIQTL+PY+
Subjt:  QRFLQKRKHRIQTLTPYT

XP_038895134.1 protein TIFY 5A-like [Benincasa hispida]1.2e-1756.2Show/hide
Query:  MEPQHTLHCNLELCLSPPPAPPSSATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQME-ERKTTCR------TRSAEEKSS---SMK
        MEP   L+CNLELCLSPP + PS+     + +TSTS H+H         P+ DLTELQARAII+ ATRQME ER++T R      T     KS    SM+
Subjt:  MEPQHTLHCNLELCLSPPPAPPSSATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQME-ERKTTCR------TRSAEEKSS---SMK

Query:  RSLQRFLQKRKHRIQTLTPYT
        RSLQRFLQKRKHR QTL+PYT
Subjt:  RSLQRFLQKRKHRIQTLTPYT

TrEMBL top hitse value%identityAlignment
A0A0A0LX13 Uncharacterized protein7.6e-1349.19Show/hide
Query:  MEPQHTLHCNLELCLSPPPAPPSSATAA---ESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQMEERKT---TCRTRSAEEK--------S
        MEP      NLELCLSPP + PS+ T+     S +TS  +H  P+     G    DLTE+QA+AII+ ATRQME  ++   TCR  S+ E+        S
Subjt:  MEPQHTLHCNLELCLSPPPAPPSSATAA---ESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQMEERKT---TCRTRSAEEK--------S

Query:  SSMKRSLQRFLQKRKHRIQTLTPY
         S++RSLQRFLQKRK RIQTL+PY
Subjt:  SSMKRSLQRFLQKRKHRIQTLTPY

A0A1S3BA64 protein TIFY 5A-like2.5e-1652.85Show/hide
Query:  QHTLHCNLELCLSPPPAPPS---SATAAESTTTSTSDHHH--PMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEEK--------SSS
        +H  + NLELCLSPP + PS   + T A + + S+S H+H  P+     G P  DLTE+QA+AII+ ATRQM  E R TTCR  S+ E+        S S
Subjt:  QHTLHCNLELCLSPPPAPPS---SATAAESTTTSTSDHHH--PMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEEK--------SSS

Query:  MKRSLQRFLQKRKHRIQTLTPYT
        M+RSLQRFLQKRK RIQTL+PYT
Subjt:  MKRSLQRFLQKRKHRIQTLTPYT

A0A6J1CG02 protein TIFY 5A-like3.1e-54100Show/hide
Query:  MEPQHTLHCNLELCLSPPPAPPSSATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQMEERKTTCRTRSAEEKSSSMKRSLQRFLQKR
        MEPQHTLHCNLELCLSPPPAPPSSATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQMEERKTTCRTRSAEEKSSSMKRSLQRFLQKR
Subjt:  MEPQHTLHCNLELCLSPPPAPPSSATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQMEERKTTCRTRSAEEKSSSMKRSLQRFLQKR

Query:  KHRIQTLTPYTT
        KHRIQTLTPYTT
Subjt:  KHRIQTLTPYTT

A0A6J1EN30 protein TIFY 5A-like1.8e-1755.56Show/hide
Query:  QHTLHCNLELCLSPPPAPPSSATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEEK-------SSSMKRSLQ
        ++ L+CNLELCLSPP + PS+AT A ST+TS  +H  P        P+ D TELQARAII+ AT QM  E R TTC   S  ++       S SM+RSLQ
Subjt:  QHTLHCNLELCLSPPPAPPSSATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEEK-------SSSMKRSLQ

Query:  RFLQKRKHRIQTLTPYT
        RFLQKRKHRIQTL+PY+
Subjt:  RFLQKRKHRIQTLTPYT

A0A6J1KQP6 protein TIFY 5A-like1.0e-1755.93Show/hide
Query:  QHTLHCNLELCLSPPPAPPS-SATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEE-------KSSSMKRSL
        ++ L+CNLELCLSPP + PS +AT A + +TSTS H+HP        P+ DLTELQARAII+ A  QM  E R TTC      E        S SM+RSL
Subjt:  QHTLHCNLELCLSPPPAPPS-SATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQM--EERKTTCRTRSAEE-------KSSSMKRSL

Query:  QRFLQKRKHRIQTLTPYT
        QRFLQKRKHRIQTL+PY+
Subjt:  QRFLQKRKHRIQTLTPYT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30135.1 jasmonate-zim-domain protein 84.9e-0431.97Show/hide
Query:  HCNLELCLSPPPAPPSSATAAESTTTSTSDHHHP------MVNYHHGFPV--TDLTELQARAIIIGATRQME-----------ERKTTCRTRSAEEKSSS
        +C+LEL L P      S+       +++S +  P      +  +++G     +D+T LQAR+II  A+R+M+            + T+          +S
Subjt:  HCNLELCLSPPPAPPSSATAAESTTTSTSDHHHP------MVNYHHGFPV--TDLTELQARAIIIGATRQME-----------ERKTTCRTRSAEEKSSS

Query:  MKRSLQRFLQKRKHRIQTLTPY
        MK+SLQ FLQKRK RIQ  +PY
Subjt:  MKRSLQRFLQKRKHRIQTLTPY

AT2G34600.1 jasmonate-zim-domain protein 74.9e-0438.89Show/hide
Query:  TDLTELQARAIIIGATRQMEERKTTCRTRSAEE-------------KSSSMKRSLQRFLQKRKHRIQTLTPY
        +DLT L+A AI+  A+R +EE+  + R+    +             + +SMKRSL  FLQKR  RIQ  +PY
Subjt:  TDLTELQARAIIIGATRQMEERKTTCRTRSAEE-------------KSSSMKRSLQRFLQKRKHRIQTLTPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCACAACACACCCTCCACTGCAACTTGGAGCTCTGCCTCTCTCCGCCGCCGGCGCCACCTTCCTCCGCCACCGCCGCTGAATCAACAACCACTTCAACTTCCGA
CCACCACCACCCCATGGTCAATTATCATCATGGATTCCCTGTTACTGATCTTACAGAGCTCCAGGCGAGAGCGATCATAATAGGAGCCACACGACAGATGGAGGAGAGGA
AGACGACATGTCGGACCAGATCGGCGGAGGAGAAATCAAGCTCCATGAAGAGATCGCTGCAGAGGTTTTTACAGAAGAGAAAGCATCGCATACAAACACTCACACCCTAC
ACTACT
mRNA sequenceShow/hide mRNA sequence
ATGGAACCACAACACACCCTCCACTGCAACTTGGAGCTCTGCCTCTCTCCGCCGCCGGCGCCACCTTCCTCCGCCACCGCCGCTGAATCAACAACCACTTCAACTTCCGA
CCACCACCACCCCATGGTCAATTATCATCATGGATTCCCTGTTACTGATCTTACAGAGCTCCAGGCGAGAGCGATCATAATAGGAGCCACACGACAGATGGAGGAGAGGA
AGACGACATGTCGGACCAGATCGGCGGAGGAGAAATCAAGCTCCATGAAGAGATCGCTGCAGAGGTTTTTACAGAAGAGAAAGCATCGCATACAAACACTCACACCCTAC
ACTACT
Protein sequenceShow/hide protein sequence
MEPQHTLHCNLELCLSPPPAPPSSATAAESTTTSTSDHHHPMVNYHHGFPVTDLTELQARAIIIGATRQMEERKTTCRTRSAEEKSSSMKRSLQRFLQKRKHRIQTLTPY
TT