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MS013495 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013495
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold402:1958867..1959127
RNA-Seq ExpressionMS013495
SyntenyMS013495
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY27743.1 Uncharacterized protein TCM_029517 [Theobroma cacao]7.2e-1355Show/hide
Query:  KKSKSQGNSNTRWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
        KK K       RW +FKR +++E    + K LGSAFKWK L N+Q+SFVD +LF+I S LEA+ L   LCFF+LCCGCHF
Subjt:  KKSKSQGNSNTRWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
KAB2060781.1 hypothetical protein ES319_A10G042000v1 [Gossypium barbadense]2.7e-1257.75Show/hide
Query:  RWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNL--QISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
        RW +FKR +++EL   + K LGSAFKWK + +L  Q+SF+D +LFKI S LEA+ L   LCFF+LCCGCHF
Subjt:  RWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNL--QISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
KAG6583910.1 hypothetical protein SDJN03_19842, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2372.41Show/hide
Query:  MDEEIVTKKSKSQGNSNTRWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
        MDEE+  K+SK  G+S T W+IFKRSLRRE    KMKLLGSAFKWK LTNLQISF+D LLFKIVS LE +VL   LCFFFLC GCHF
Subjt:  MDEEIVTKKSKSQGNSNTRWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
KAG7012520.1 hypothetical protein SDJN02_25272, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-1666.25Show/hide
Query:  MDEEIVTKKSKSQGNSNTRWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVLGGALCFFF
        MDE++  K SKS GN  TRW+IFKRSLRRE    KMKLLGSAFKWK LTNLQISF+D +LFK VS LE +VL     F F
Subjt:  MDEEIVTKKSKSQGNSNTRWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVLGGALCFFF
KAG7019527.1 hypothetical protein SDJN02_18488, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-1672.22Show/hide
Query:  MDEEIVTKKSKSQGNSNTRWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVL
        MDEE+  K+SK  G+S T W+IFKRSLRRE    KMKLLGSAFKWK LTNLQISF+D LLFKIVS LE +VL
Subjt:  MDEEIVTKKSKSQGNSNTRWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVL
TrEMBL top hitse value%identityAlignment
A0A061GEB5 Uncharacterized protein3.5e-1355Show/hide
Query:  KKSKSQGNSNTRWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
        KK K       RW +FKR +++E    + K LGSAFKWK L N+Q+SFVD +LF+I S LEA+ L   LCFF+LCCGCHF
Subjt:  KKSKSQGNSNTRWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
A0A5D2EUX7 Uncharacterized protein1.3e-1257.75Show/hide
Query:  RWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNL--QISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
        RW +FKR +++EL   + K LGSAFKWK + +L  Q+SF+D +LFKI S LEA+ L   LCFF+LCCGCHF
Subjt:  RWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNL--QISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
A0A5D2NM64 Uncharacterized protein1.3e-1257.75Show/hide
Query:  RWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNL--QISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
        RW +FKR +++EL   + K LGSAFKWK + +L  Q+SF+D +LFKI S LEA+ L   LCFF+LCCGCHF
Subjt:  RWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNL--QISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
A0A5D2XH21 Uncharacterized protein1.3e-1257.75Show/hide
Query:  RWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNL--QISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
        RW +FKR +++EL   + K LGSAFKWK + +L  Q+SF+D +LFKI S LEA+ L   LCFF+LCCGCHF
Subjt:  RWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNL--QISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
A0A5J5U090 Uncharacterized protein1.3e-1257.75Show/hide
Query:  RWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNL--QISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
        RW +FKR +++EL   + K LGSAFKWK + +L  Q+SF+D +LFKI S LEA+ L   LCFF+LCCGCHF
Subjt:  RWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNL--QISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06475.1 unknown protein1.1e-0646.81Show/hide
Query:  SAFKWKTLTNLQIS-FVDGLLFKIVSTLEALVLGGALCFFFLCCGCH
        S+ KWK +  + ++  VDG+++K++  +EA VL   LCFF+LCCGCH
Subjt:  SAFKWKTLTNLQIS-FVDGLLFKIVSTLEALVLGGALCFFFLCCGCH
AT5G46295.1 unknown protein4.4e-0846.27Show/hide
Query:  SIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF
        SI+K +  +E  ++K   LG   KWK L NL+++F++ L ++I+S +EA+VL   L FFFLCCGC F
Subjt:  SIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAAGAAATTGTTACAAAGAAAAGCAAGAGCCAGGGGAATAGCAACACGAGGTGGTCGATTTTCAAGAGATCGCTGAGGAGAGAGTTGCCAAAAATGAAGATGAA
GCTCCTTGGATCGGCGTTTAAGTGGAAGACACTGACGAATTTGCAGATTTCTTTTGTGGATGGTTTGCTTTTCAAGATTGTTTCTACGTTGGAGGCCCTAGTCTTGGGCG
GCGCTCTCTGTTTCTTCTTCCTCTGCTGTGGATGCCACTTT
mRNA sequenceShow/hide mRNA sequence
ATGGACGAAGAAATTGTTACAAAGAAAAGCAAGAGCCAGGGGAATAGCAACACGAGGTGGTCGATTTTCAAGAGATCGCTGAGGAGAGAGTTGCCAAAAATGAAGATGAA
GCTCCTTGGATCGGCGTTTAAGTGGAAGACACTGACGAATTTGCAGATTTCTTTTGTGGATGGTTTGCTTTTCAAGATTGTTTCTACGTTGGAGGCCCTAGTCTTGGGCG
GCGCTCTCTGTTTCTTCTTCCTCTGCTGTGGATGCCACTTT
Protein sequenceShow/hide protein sequence
MDEEIVTKKSKSQGNSNTRWSIFKRSLRRELPKMKMKLLGSAFKWKTLTNLQISFVDGLLFKIVSTLEALVLGGALCFFFLCCGCHF