CuGenDBv2

Gene ID	MS013500
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Prefoldin subunit 6-like
Genome location	scaffold402:2007105..2008010
RNA-Seq Expression	MS013500
Synteny	MS013500
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0016020 - membrane (cellular component) GO:0016272 - prefoldin complex (cellular component) GO:0051082 - unfolded protein binding (molecular function)
InterPro domains	IPR002777 - Prefoldin beta-like IPR009053 - Prefoldin

Homology

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GenBank top hits

e value

%identity

Alignment

KAA3479056.1 prefoldin subunit 6-like [Gossypium australe]

6.4e-33

60.67

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Query:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL
        SS++A R+LQR+LE KAN+LSKLQKGKP          T  ++ ++     LL ++    S++  + +  P      DIAKNHQVRKKYTIQLGENELVL
Subjt:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL

Query:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYVFSFVF
        KELDLL +DANVYKLIGPVLVKQDLAEANANVRKRI+YISAELY   ++F
Subjt:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYVFSFVF

KAG8494576.1 hypothetical protein CXB51_011993 [Gossypium anomalum]

1.3e-33

66.43

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Query:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL
        SS++ALRELQR+LE KAN+LSKLQKGKP         T   ++  F IS   L  +  L S    + +    L    DIAKNHQVRKKYTIQLGENELVL
Subjt:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL

Query:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
        KELDLLN+DANVYKLIGPVLVKQDLAEANANVRKRI+YISAEL
Subjt:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL

KDP37967.1 hypothetical protein JCGZ_04610 [Jatropha curcas]

4.4e-34

60.96

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Query:  MSSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNL--MDVSDIAKNHQVRKKYTIQLGENE
        M+S++A+RELQR+LE KAN+LSK QKGK  + F +   + CT                    +   +  KNP +    ++DIAKNHQVRKKYT+QLGENE
Subjt:  MSSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNL--MDVSDIAKNHQVRKKYTIQLGENE

Query:  LVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
        LVLKELDLL +DANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
Subjt:  LVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL

MBA0779181.1 hypothetical protein [Gossypium trilobum]

9.8e-34

61.33

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Query:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL
        SS++ALR+LQR+LE KAN+LSKLQKGKP          T  ++ ++     LL ++    S++  + +  P      DIAKNHQVRKKYTIQLGENELVL
Subjt:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL

Query:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYVFSFVF
        KELDLL +DANVYKLIGPVLVKQDLAEANANVRKRI+YISAELY   ++F
Subjt:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYVFSFVF

MBA0870619.1 hypothetical protein [Gossypium schwendimanii]

1.1e-32

62.07

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Query:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL
        SS++ALR+LQ +LE KAN+LSKLQKGKP          T  ++ ++     LL ++    S++  + +  P      DIAKNHQVRKKYTIQLGENELVL
Subjt:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL

Query:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYV
        KELDLL +DANVYKLIGPVLVKQDLAEANANVRKRI+YISAELY+
Subjt:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYV

TrEMBL top hits

e value

%identity

Alignment

A0A067KPA0 Uncharacterized protein

2.1e-34

60.96

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Query:  MSSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNL--MDVSDIAKNHQVRKKYTIQLGENE
        M+S++A+RELQR+LE KAN+LSK QKGK  + F +   + CT                    +   +  KNP +    ++DIAKNHQVRKKYT+QLGENE
Subjt:  MSSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNL--MDVSDIAKNHQVRKKYTIQLGENE

Query:  LVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
        LVLKELDLL +DANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
Subjt:  LVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL

A0A5B6WCN9 Prefoldin subunit 6-like

3.1e-33

60.67

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Query:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL
        SS++A R+LQR+LE KAN+LSKLQKGKP          T  ++ ++     LL ++    S++  + +  P      DIAKNHQVRKKYTIQLGENELVL
Subjt:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL

Query:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYVFSFVF
        KELDLL +DANVYKLIGPVLVKQDLAEANANVRKRI+YISAELY   ++F
Subjt:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYVFSFVF

A0A7J8TJK2 Uncharacterized protein

6.9e-33

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Query:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL
        SS++ALR+LQ +LE KAN+LSKLQKGKP          T  ++ ++     LL ++    S++  + +  P      DIAKNHQVRKKYTIQLGENELVL
Subjt:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL

Query:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYVFSFVF
        KEL+LL +DANVYKLIGPVLVKQDLAEANANVRKRI+YISAELY   ++F
Subjt:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYVFSFVF

A0A7J9F1X9 Uncharacterized protein

4.8e-34

61.33

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Query:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL
        SS++ALR+LQR+LE KAN+LSKLQKGKP          T  ++ ++     LL ++    S++  + +  P      DIAKNHQVRKKYTIQLGENELVL
Subjt:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL

Query:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYVFSFVF
        KELDLL +DANVYKLIGPVLVKQDLAEANANVRKRI+YISAELY   ++F
Subjt:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYVFSFVF

A0A7J9MJP5 Uncharacterized protein

5.3e-33

62.07

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Query:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL
        SS++ALR+LQ +LE KAN+LSKLQKGKP          T  ++ ++     LL ++    S++  + +  P      DIAKNHQVRKKYTIQLGENELVL
Subjt:  SSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVL

Query:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYV
        KELDLL +DANVYKLIGPVLVKQDLAEANANVRKRI+YISAELY+
Subjt:  KELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYV

SwissProt top hits

e value

%identity

Alignment

O15212 Prefoldin subunit 6

9.3e-11

53.03

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Query:  DIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
        D++K+   R+K   QL EN +V +EL LL+    V+KL+GPVLVKQ+L EA A V KR+DYI+AE+
Subjt:  DIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL

Q03958 Prefoldin subunit 6

9.3e-11

53.03

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Query:  DIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
        D++K+   R+K   QL EN +V +EL LL+    V+KL+GPVLVKQ+L EA A V KR+DYI+AE+
Subjt:  DIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL

Q17Q89 Prefoldin subunit 6

9.3e-11

53.03

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Query:  DIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
        D++K+   R+K   QL EN +V +EL LL+    V+KL+GPVLVKQ+L EA A V KR+DYI+AE+
Subjt:  DIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL

Q5TJE6 Prefoldin subunit 6

9.3e-11

53.03

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Query:  DIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
        D++K+   R+K   QL EN +V +EL LL+    V+KL+GPVLVKQ+L EA A V KR+DYI+AE+
Subjt:  DIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL

Q9VW56 Probable prefoldin subunit 6

4.6e-10

65.38

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Query:  QLGENELVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
        QL EN+ VL EL+LL  D  VYKL GPVLVKQ+L E+  NV KRI+YIS EL
Subjt:  QLGENELVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL

Arabidopsis top hits

e value

%identity

Alignment

AT1G29990.1 prefoldin 6

4.6e-29

53.52

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Query:  SASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVLK
        S+S +R+LQR+LE KAN+L K+QK                                                    DI KNHQ+RKKYTIQLGENELVLK
Subjt:  SASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVLK

Query:  ELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
        ELDLL +DANVYKLIGPVLVKQDLAEANANVRKRI+YISAEL
Subjt:  ELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL

Sequences

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CDS sequence

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ATGAGTTCTGCAAGCGCTCTTCGAGAACTACAGCGCGAGCTGGAGGCGAAAGCCAACGAGCTCAGCAAGCTACAGAAAGGCAAGCCTCCAATTGATTTTCGCTCCCCTGT
TCCCACCACTTGCACGATTTATCGAAACTTCAATATTTCAATTAGATTACTGTGTCGAATGTTCTATCTGGATTCTGTACAATCAACTTACTTTCACAAAAACCCTAACT
TGATGGATGTATCAGATATTGCGAAGAACCACCAAGTGAGGAAGAAATACACTATTCAGCTGGGTGAGAATGAGCTCGTCCTTAAGGAATTGGATCTACTGAATGATGAT
GCAAATGTGTATAAACTGATTGGTCCAGTACTCGTGAAGCAGGATCTGGCAGAAGCAAATGCGAACGTTCGCAAGCGAATAGACTACATCTCTGCTGAATTGTATGTTTT
TTCATTTGTTTTT

mRNA sequence

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Protein sequence

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MSSASALRELQRELEAKANELSKLQKGKPPIDFRSPVPTTCTIYRNFNISIRLLCRMFYLDSVQSTYFHKNPNLMDVSDIAKNHQVRKKYTIQLGENELVLKELDLLNDD
ANVYKLIGPVLVKQDLAEANANVRKRIDYISAELYVFSFVF

MS013500 (gene) of Bitter gourd (TR) v1 genome