; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013509 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013509
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
Genome locationscaffold402:2067120..2068740
RNA-Seq ExpressionMS013509
SyntenyMS013509
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008892 - Cold-regulated 413 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147401.1 cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus]2.9e-9382.97Show/hide
Query:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL
        MVC+SLSSA SL+  S YK+KLS PLSLRS P +AKLSLN A K+SSICYNPLRFAVG+EG     INK++SRGL+ VCYAMP+  R +QWISTISSVVL
Subjt:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG QEG IISLLIAA+LAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG

Query:  SFRRAFDQNSIVATAAVVCVTAASFLLVI
        SF+RAFDQNSIVAT AVVC+TA SFL VI
Subjt:  SFRRAFDQNSIVATAAVVCVTAASFLLVI

XP_008443932.1 PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo]6.1e-9682.97Show/hide
Query:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL
        MVC+SLSSA SL+  S YK+KLS PLSLRS P +AKLSLN A K+SSICYNPLRFAVG+EGIATA INK+++RGL+  CYAMP+  R +QW+STISSVVL
Subjt:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG QEG IISLLIAA+LAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG

Query:  SFRRAFDQNSIVATAAVVCVTAASFLLVI
        SF+RAFDQNSIVAT AV+C+TA SFL VI
Subjt:  SFRRAFDQNSIVATAAVVCVTAASFLLVI

XP_022140053.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Momordica charantia]5.0e-11499.13Show/hide
Query:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL
        MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTIS VVL
Subjt:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG QEGSIISLLIAAFLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG

Query:  SFRRAFDQNSIVATAAVVCVTAASFLLVI
        SFRRAFDQNSIVATAAVVCVTAASFLLVI
Subjt:  SFRRAFDQNSIVATAAVVCVTAASFLLVI

XP_022994881.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]2.4e-9282.1Show/hide
Query:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL
        MVC+ LSSA SLH+  L+K+KLSAPLSLRS   +AKL+ NPA K+SSIC NP+RF  G++  +T AINK+R RGL+ VCYAMPL+ARN+QWISTISSV+L
Subjt:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG QEG+IISLLIAA+LAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG

Query:  SFRRAFDQNSIVATAAVVCVTAASFLLVI
        SFRRAFDQNSIVAT A++CVTA SFLLVI
Subjt:  SFRRAFDQNSIVATAAVVCVTAASFLLVI

XP_038896035.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida]6.1e-9682.97Show/hide
Query:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL
        MVC+SLSSA SL+  SLY++KLS PLSLRS P +AKLS +PA K+SSICYNPLRFAVG+EGIATAAI K+RSRGL+ +CYAMP+ AR +QWISTISS VL
Subjt:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG
        MLA+GTGIQKSFIVPLFAL APASV+SWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRG QEG+IISL+IAA+LAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG

Query:  SFRRAFDQNSIVATAAVVCVTAASFLLVI
        SFRRAFDQNSIVAT AV+C TA SFLLVI
Subjt:  SFRRAFDQNSIVATAAVVCVTAASFLLVI

TrEMBL top hitse value%identityAlignment
A0A0A0LXM7 Uncharacterized protein1.4e-9382.97Show/hide
Query:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL
        MVC+SLSSA SL+  S YK+KLS PLSLRS P +AKLSLN A K+SSICYNPLRFAVG+EG     INK++SRGL+ VCYAMP+  R +QWISTISSVVL
Subjt:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG QEG IISLLIAA+LAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG

Query:  SFRRAFDQNSIVATAAVVCVTAASFLLVI
        SF+RAFDQNSIVAT AVVC+TA SFL VI
Subjt:  SFRRAFDQNSIVATAAVVCVTAASFLLVI

A0A1S3B961 cold-regulated 413 inner membrane protein 2, chloroplastic-like3.0e-9682.97Show/hide
Query:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL
        MVC+SLSSA SL+  S YK+KLS PLSLRS P +AKLSLN A K+SSICYNPLRFAVG+EGIATA INK+++RGL+  CYAMP+  R +QW+STISSVVL
Subjt:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG QEG IISLLIAA+LAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG

Query:  SFRRAFDQNSIVATAAVVCVTAASFLLVI
        SF+RAFDQNSIVAT AV+C+TA SFL VI
Subjt:  SFRRAFDQNSIVATAAVVCVTAASFLLVI

A0A5D3DB21 Cold-regulated 413 inner membrane protein 23.0e-9682.97Show/hide
Query:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL
        MVC+SLSSA SL+  S YK+KLS PLSLRS P +AKLSLN A K+SSICYNPLRFAVG+EGIATA INK+++RGL+  CYAMP+  R +QW+STISSVVL
Subjt:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG QEG IISLLIAA+LAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG

Query:  SFRRAFDQNSIVATAAVVCVTAASFLLVI
        SF+RAFDQNSIVAT AV+C+TA SFL VI
Subjt:  SFRRAFDQNSIVATAAVVCVTAASFLLVI

A0A6J1CH44 cold-regulated 413 inner membrane protein 1, chloroplastic-like2.4e-11499.13Show/hide
Query:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL
        MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTIS VVL
Subjt:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG QEGSIISLLIAAFLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG

Query:  SFRRAFDQNSIVATAAVVCVTAASFLLVI
        SFRRAFDQNSIVATAAVVCVTAASFLLVI
Subjt:  SFRRAFDQNSIVATAAVVCVTAASFLLVI

A0A6J1K0I6 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X21.2e-9282.1Show/hide
Query:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL
        MVC+ LSSA SLH+  L+K+KLSAPLSLRS   +AKL+ NPA K+SSIC NP+RF  G++  +T AINK+R RGL+ VCYAMPL+ARN+QWISTISSV+L
Subjt:  MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG QEG+IISLLIAA+LAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAG

Query:  SFRRAFDQNSIVATAAVVCVTAASFLLVI
        SFRRAFDQNSIVAT A++CVTA SFLLVI
Subjt:  SFRRAFDQNSIVATAAVVCVTAASFLLVI

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic1.9e-6057.14Show/hide
Query:  VCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIAT--AAINKRRSRGLTTVCYAMP-LTARNIQWISTISSV
        +CLS S   SLH    +       L+L+  P  + +S       S +C+NPLR +   +  AT  A   KRR RG + VCYA P L+  N+QWISTIS V
Subjt:  VCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIAT--AAINKRRSRGLTTVCYAMP-LTARNIQWISTISSV

Query:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSR
         LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+SL I+ FLAFQHFSR
Subjt:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSR

Query:  AGSFRRAFDQNSIVATAAVVCVTAASFLLVI
        AG+ ++AFDQNS++AT A++ VT  SFL +I
Subjt:  AGSFRRAFDQNSIVATAAVVCVTAASFLLVI

O23164 Cold-regulated 413 plasma membrane protein 44.8e-1131.43Show/hide
Query:  IQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGAQEGS
        +QW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G+
Subjt:  IQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGAQEGS

Query:  IISLLIAAFLAFQHFSRAGSFRRAFDQ-NSIVATAAVVCV
        +I L+IA +L  +H   +G F+ +F Q N I  T  +V +
Subjt:  IISLLIAAFLAFQHFSRAGSFRRAFDQ-NSIVATAAVVCV

Q94AL8 Cold-regulated 413 inner membrane protein 1, chloroplastic7.4e-6055.65Show/hide
Query:  VCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAA--INKRRSRGLTTVCYAMPLTARNIQWISTISSVV
        +CLS S   SLH       K    L LRS P  + LS       S +C+NPLR +   +  AT +  + KRR RG + VCYA P++A ++QWISTIS + 
Subjt:  VCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAA--INKRRSRGLTTVCYAMPLTARNIQWISTISSVV

Query:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRA
        LMLARGTGI KS +VPLFAL AP+S+++WIKGEYG+W AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG+II++ I+ FLAFQHFSRA
Subjt:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRA

Query:  GSFRRAFDQNSIVATAAVVCVTAASFLLVI
        GS  +A+++ S++AT A++ VT  S LL++
Subjt:  GSFRRAFDQNSIVATAAVVCVTAASFLLVI

Q9SVL6 Cold-regulated 413 plasma membrane protein 28.3e-1129.92Show/hide
Query:  IQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGAQEGS
        ++++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RG   G+
Subjt:  IQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGAQEGS

Query:  IISLLIAAFLAFQHFSRAGSFRRAFDQ
        +ISL I  +L  +H   +G FR +F Q
Subjt:  IISLLIAAFLAFQHFSRAGSFRRAFDQ

Q9XIM7 Cold-regulated 413 plasma membrane protein 15.9e-0930Show/hide
Query:  IQWISTISSVVLMLAR----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGAQEGS
        ++W+++I+++ L++       T +  S ++P      P+ +    +GE G W AF+A++V+LFF       LE+P   +LL +VAP  +    R +  G 
Subjt:  IQWISTISSVVLMLAR----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGAQEGS

Query:  IISLLIAAFLAFQHFSRAGSFRRAFDQ-NSIVATAAVVCV
         I L I  +L  +H   +G FR AF + N I  T  ++C+
Subjt:  IISLLIAAFLAFQHFSRAGSFRRAFDQ-NSIVATAAVVCV

Arabidopsis top hitse value%identityAlignment
AT1G29390.1 cold regulated 314 thylakoid membrane 21.4e-6157.14Show/hide
Query:  VCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIAT--AAINKRRSRGLTTVCYAMP-LTARNIQWISTISSV
        +CLS S   SLH    +       L+L+  P  + +S       S +C+NPLR +   +  AT  A   KRR RG + VCYA P L+  N+QWISTIS V
Subjt:  VCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIAT--AAINKRRSRGLTTVCYAMP-LTARNIQWISTISSV

Query:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSR
         LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+SL I+ FLAFQHFSR
Subjt:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSR

Query:  AGSFRRAFDQNSIVATAAVVCVTAASFLLVI
        AG+ ++AFDQNS++AT A++ VT  SFL +I
Subjt:  AGSFRRAFDQNSIVATAAVVCVTAASFLLVI

AT1G29390.2 cold regulated 314 thylakoid membrane 27.1e-5867.66Show/hide
Query:  TAAINKRRSRGLTTVCYAMP-LTARNIQWISTISSVVLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLL
        +A   KRR RG + VCYA P L+  N+QWISTIS V LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW AFLALL RLFF  P ELE+PFI+LL
Subjt:  TAAINKRRSRGLTTVCYAMP-LTARNIQWISTISSVVLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLL

Query:  LVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAGSFRRAFDQNSIVATAAVVCVTAASFLLVI
        LVIVAPYQV ++RG QEG+I+SL I+ FLAFQHFSRAG+ ++AFDQNS++AT A++ VT  SFL +I
Subjt:  LVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAGSFRRAFDQNSIVATAAVVCVTAASFLLVI

AT1G29395.1 COLD REGULATED 314 INNER MEMBRANE 15.2e-6155.65Show/hide
Query:  VCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAA--INKRRSRGLTTVCYAMPLTARNIQWISTISSVV
        +CLS S   SLH       K    L LRS P  + LS       S +C+NPLR +   +  AT +  + KRR RG + VCYA P++A ++QWISTIS + 
Subjt:  VCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAA--INKRRSRGLTTVCYAMPLTARNIQWISTISSVV

Query:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRA
        LMLARGTGI KS +VPLFAL AP+S+++WIKGEYG+W AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG+II++ I+ FLAFQHFSRA
Subjt:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRA

Query:  GSFRRAFDQNSIVATAAVVCVTAASFLLVI
        GS  +A+++ S++AT A++ VT  S LL++
Subjt:  GSFRRAFDQNSIVATAAVVCVTAASFLLVI

AT3G50830.1 cold-regulated 413-plasma membrane 25.9e-1229.92Show/hide
Query:  IQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGAQEGS
        ++++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RG   G+
Subjt:  IQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGAQEGS

Query:  IISLLIAAFLAFQHFSRAGSFRRAFDQ
        +ISL I  +L  +H   +G FR +F Q
Subjt:  IISLLIAAFLAFQHFSRAGSFRRAFDQ

AT4G37220.1 Cold acclimation protein WCOR413 family3.4e-1231.43Show/hide
Query:  IQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGAQEGS
        +QW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G+
Subjt:  IQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGAQEGS

Query:  IISLLIAAFLAFQHFSRAGSFRRAFDQ-NSIVATAAVVCV
        +I L+IA +L  +H   +G F+ +F Q N I  T  +V +
Subjt:  IISLLIAAFLAFQHFSRAGSFRRAFDQ-NSIVATAAVVCV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTTTATCTCTTTCTTCTGCTACTTCACTTCACACTCTCTCTCTCTACAAAACCAAGCTCTCCGCTCCTCTCTCTCTAAGATCCCCACCTCTGCATGCAAAGCT
CTCGCTCAACCCCGCCGTTAAACGGAGTTCTATCTGTTACAATCCGCTCAGGTTTGCCGTCGGAAACGAGGGGATTGCGACGGCGGCGATTAACAAGAGGAGGAGCCGTG
GTTTAACTACTGTTTGTTACGCTATGCCTCTTACTGCTCGCAATATTCAGTGGATCTCTACTATTTCTTCTGTGGTTTTAATGCTCGCAAGGGGGACGGGGATTCAGAAG
TCATTTATTGTTCCGCTATTTGCCCTTCAGGCACCTGCAAGTGTTATATCGTGGATTAAAGGAGAATACGGCATTTGGACCGCATTTTTGGCACTTCTTGTTCGACTGTT
CTTCTTCATACCTGGTGAACTGGAGATACCATTCATCTCATTGCTTCTGGTGATCGTGGCCCCATATCAAGTCCAGAACTTAAGGGGAGCTCAAGAAGGGAGCATTATCT
CATTACTGATTGCAGCATTTTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCATTTGACCAGAATTCAATAGTTGCAACAGCAGCAGTCGTTTGTGTT
ACTGCTGCCTCATTCCTCCTTGTGATC
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGTTTATCTCTTTCTTCTGCTACTTCACTTCACACTCTCTCTCTCTACAAAACCAAGCTCTCCGCTCCTCTCTCTCTAAGATCCCCACCTCTGCATGCAAAGCT
CTCGCTCAACCCCGCCGTTAAACGGAGTTCTATCTGTTACAATCCGCTCAGGTTTGCCGTCGGAAACGAGGGGATTGCGACGGCGGCGATTAACAAGAGGAGGAGCCGTG
GTTTAACTACTGTTTGTTACGCTATGCCTCTTACTGCTCGCAATATTCAGTGGATCTCTACTATTTCTTCTGTGGTTTTAATGCTCGCAAGGGGGACGGGGATTCAGAAG
TCATTTATTGTTCCGCTATTTGCCCTTCAGGCACCTGCAAGTGTTATATCGTGGATTAAAGGAGAATACGGCATTTGGACCGCATTTTTGGCACTTCTTGTTCGACTGTT
CTTCTTCATACCTGGTGAACTGGAGATACCATTCATCTCATTGCTTCTGGTGATCGTGGCCCCATATCAAGTCCAGAACTTAAGGGGAGCTCAAGAAGGGAGCATTATCT
CATTACTGATTGCAGCATTTTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCATTTGACCAGAATTCAATAGTTGCAACAGCAGCAGTCGTTTGTGTT
ACTGCTGCCTCATTCCTCCTTGTGATC
Protein sequenceShow/hide protein sequence
MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNEGIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISSVVLMLARGTGIQK
SFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGAQEGSIISLLIAAFLAFQHFSRAGSFRRAFDQNSIVATAAVVCV
TAASFLLVI