; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013513 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013513
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L32
Genome locationscaffold402:2123797..2125427
RNA-Seq ExpressionMS013513
SyntenyMS013513
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001515 - Ribosomal protein L32e
IPR036351 - Ribosomal protein L32e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573344.1 60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia]3.3e-6598.5Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKR  KFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_022140193.1 60S ribosomal protein L32-1 [Momordica charantia]2.3e-66100Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_022927470.1 60S ribosomal protein L32-1 [Cucurbita moschata]5.6e-6596.99Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKR QKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_023519489.1 60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo]7.3e-6596.24Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KK+VKKR QKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_023542869.1 60S ribosomal protein L32-1 [Cucurbita pepo subsp. pepo]4.3e-6597.74Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR  KFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

TrEMBL top hitse value%identityAlignment
A0A6J1CF23 60S ribosomal protein L32-11.1e-66100Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1EP15 60S ribosomal protein L32-12.7e-6596.99Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKR QKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1GUI9 60S ribosomal protein L32-1-like3.5e-6597.74Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKR  KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1K6F1 60S ribosomal protein L32-1-like3.5e-6597.74Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKR  KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1KGP3 60S ribosomal protein L32-12.7e-6596.99Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKR QKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

SwissProt top hitse value%identityAlignment
E2RKA8 60S ribosomal protein L323.3e-4467.69Show/hide
Query:  PLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST
        PL+  KIVKKR +KF R QSDR + +K +WR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELEVL+M N++YCAEIAH+VS+
Subjt:  PLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

P49211 60S ribosomal protein L32-15.1e-6187.22Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKFVVHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRK IVERA+QLDVVVTN+LARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

P62910 60S ribosomal protein L323.3e-4467.69Show/hide
Query:  PLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST
        PL+  KIVKKR +KF R QSDR + +K +WR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELEVL+M N++YCAEIAH+VS+
Subjt:  PLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

Q76KA3 60S ribosomal protein L323.3e-4467.69Show/hide
Query:  PLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST
        PL+  KIVKKR +KF R QSDR + +K +WR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELEVL+M N++YCAEIAH+VS+
Subjt:  PLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

Q9FHG2 60S ribosomal protein L32-23.3e-6084.96Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

Arabidopsis top hitse value%identityAlignment
AT4G18100.1 Ribosomal protein L32e3.6e-6287.22Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKFVVHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRK IVERA+QLDVVVTN+LARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

AT5G46430.1 Ribosomal protein L32e2.3e-6184.96Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

AT5G46430.2 Ribosomal protein L32e2.3e-6184.96Show/hide
Query:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGCCTTTGCTCACGAAGAAGATCGTGAAGAAGAGGGCCCAGAAGTTCAAGAGGCCCCAGAGTGATCGAAAGATCTCCGTCAAGGAAAGCTGGAGAAGACCAAA
GGGTATTGATTCCAGAGTTAGAAGAAAGTTCAAAGGATGTACGCTGATGCCGAATATTGGTTATGGTACTGACAAAAAGACCCGTCACTACCTTCCTAATGGTTTCAAGA
AGTTCGTTGTTCACAATGTCAAGGAGCTCGAGGTCTTGATGATGCACAACAGGACTTATTGTGCCGAAATTGCCCACGATGTTTCCACAAGGAAGAGGAAAGAGATTGTG
GAAAGAGCAGCCCAACTTGATGTTGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGCCTTTGCTCACGAAGAAGATCGTGAAGAAGAGGGCCCAGAAGTTCAAGAGGCCCCAGAGTGATCGAAAGATCTCCGTCAAGGAAAGCTGGAGAAGACCAAA
GGGTATTGATTCCAGAGTTAGAAGAAAGTTCAAAGGATGTACGCTGATGCCGAATATTGGTTATGGTACTGACAAAAAGACCCGTCACTACCTTCCTAATGGTTTCAAGA
AGTTCGTTGTTCACAATGTCAAGGAGCTCGAGGTCTTGATGATGCACAACAGGACTTATTGTGCCGAAATTGCCCACGATGTTTCCACAAGGAAGAGGAAAGAGATTGTG
GAAAGAGCAGCCCAACTTGATGTTGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAA
Protein sequenceShow/hide protein sequence
MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIV
ERAAQLDVVVTNKLARLRSQEDE