CuGenDBv2

Gene ID	MS013517
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ABC transporter B family member 9 like
Genome location	scaffold402:2145578..2145715
RNA-Seq Expression	MS013517
Synteny	MS013517
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	IPR011527 - ABC transporter type 1, transmembrane domain IPR036640 - ABC transporter type 1, transmembrane domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAF3456695.1 hypothetical protein FNV43_RR01349 [Rhamnella rubrinervis]

3.0e-10

73.91

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQ+TRI GLYL+TILRQ IA FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

PON33800.1 ABC transporter [Parasponia andersonii]

3.0e-10

73.91

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQ+TRI GLYL+TILRQ IA FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

XP_015886789.1 ABC transporter B family member 9-like isoform X1 [Ziziphus jujuba]

3.0e-10

73.91

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQ+TRI GLYL+TILRQ IA FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

XP_015887240.1 ABC transporter B family member 9-like isoform X1 [Ziziphus jujuba]

3.0e-10

73.91

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQ+TRI GLYL+TILRQ IA FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

XP_024931211.1 ABC transporter B family member 9-like isoform X2 [Ziziphus jujuba]

3.0e-10

73.91

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQ+TRI GLYL+TILRQ IA FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

TrEMBL top hits

e value

%identity

Alignment

A0A2P5AB81 ABC transporter

1.5e-10

73.91

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQ+TRI GLYL+TILRQ IA FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

A0A6P3ZYL1 ABC transporter B family member 9-like isoform X1

1.5e-10

73.91

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQ+TRI GLYL+TILRQ IA FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

A0A6P4A0Q8 ABC transporter B family member 9-like isoform X1

1.5e-10

73.91

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQ+TRI GLYL+TILRQ IA FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

A0A6P4ALJ0 ABC transporter B family member 9-like isoform X2

1.5e-10

73.91

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQ+TRI GLYL+TILRQ IA FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

A0A6P6GAW0 ABC transporter B family member 9-like isoform X2

1.5e-10

73.91

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQ+TRI GLYL+TILRQ IA FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

SwissProt top hits

e value

%identity

Alignment

Q9FHF1 ABC transporter B family member 7

7.5e-12

71.74

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQSTRI  LYL+TILRQ I  FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

Q9FWX7 ABC transporter B family member 11

1.2e-09

58.7

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +V+CWM+TG+RQ+ RI   YL+TILRQ I  FD +T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

Q9M0M2 ABC transporter B family member 9

2.2e-11

69.57

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQS  I GLYL+TILRQ I  FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

Q9SYI2 ABC transporter B family member 3

2.4e-10

60.87

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +V+CWM+TG+RQ+ RI  LYL+TILRQ I  FD +T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

Q9SYI3 ABC transporter B family member 5

9.1e-10

58.7

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +V+CWM+TG+RQ+ RI  LYL+TILRQ I  FD +   G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

Arabidopsis top hits

e value

%identity

Alignment

AT1G02520.1 P-glycoprotein 11

8.5e-11

58.7

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +V+CWM+TG+RQ+ RI   YL+TILRQ I  FD +T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

AT4G01820.1 P-glycoprotein 3

1.7e-11

60.87

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +V+CWM+TG+RQ+ RI  LYL+TILRQ I  FD +T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

AT4G01830.1 P-glycoprotein 5

6.5e-11

58.7

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +V+CWM+TG+RQ+ RI  LYL+TILRQ I  FD +   G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

AT4G18050.1 P-glycoprotein 9

1.5e-12

69.57

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQS  I GLYL+TILRQ I  FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

AT5G46540.1 P-glycoprotein 7

5.3e-13

71.74

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Query:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS
        +VSCWMVTG+RQSTRI  LYL+TILRQ I  FDT+T  G+V GRMS
Subjt:  RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

Sequences

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CDS sequence

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AGGGTGTCGTGTTGGATGGTAACAGGACAAAGACAATCGACACGGATTCTAGGTCTGTACTTACAAACAATATTACGACAACACATTGCTTTGTTCGACACTCAGACCAT
CGTCGGCGACGTCGCCGGCCGGATGTCT

mRNA sequence

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AGGGTGTCGTGTTGGATGGTAACAGGACAAAGACAATCGACACGGATTCTAGGTCTGTACTTACAAACAATATTACGACAACACATTGCTTTGTTCGACACTCAGACCAT
CGTCGGCGACGTCGCCGGCCGGATGTCT

Protein sequence

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RVSCWMVTGQRQSTRILGLYLQTILRQHIALFDTQTIVGDVAGRMS

MS013517 (gene) of Bitter gourd (TR) v1 genome