; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013534 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013534
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold402:2243636..2243956
RNA-Seq ExpressionMS013534
SyntenyMS013534
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044701.1 hypothetical protein E6C27_scaffold46G004570 [Cucumis melo var. makuwa]2.5e-2377.03Show/hide
Query:  LPMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD
        L  DRK   P+S R+L + QRRRDQ+I NCGEKVSA QCSQ+ KCRWCRSDVID+TCFTRAEALRLPQQVFSCD
Subjt:  LPMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD

KAG6573331.1 hypothetical protein SDJN03_27218, partial [Cucurbita argyrosperma subsp. sororia]2.8e-3573.08Show/hide
Query:  MGRSSDLPSPLSIFLLSFLLLFFFCVSCNGLPMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQV
        MGRS  L +PLSIFL+SFL   F CVS N L   RK   P+SDR LLS QRRRD++IPNCGEKVSALQCS++P CRWCRSD ID+TCF+RAEALRLPQQV
Subjt:  MGRSSDLPSPLSIFLLSFLLLFFFCVSCNGLPMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQV

Query:  FSCD
        FSCD
Subjt:  FSCD

KDP21149.1 hypothetical protein JCGZ_21620 [Jatropha curcas]2.7e-1446.88Show/hide
Query:  SIFLLSFLLLFFFCVSCNGLPMDRKTTFPT---SDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD
        S    S  L+F   +  + L     T  P+   S RSLL++QR   Q+IPNC   V+  QCSQ+PKCRWC+S+ +D+ CF++ EA RLPQQVF CD
Subjt:  SIFLLSFLLLFFFCVSCNGLPMDRKTTFPT---SDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD

OMO65460.1 hypothetical protein COLO4_31211 [Corchorus olitorius]3.6e-1448.86Show/hide
Query:  FLLLFFFCVSCNGL-PMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD
        F +LF    + + L   D +  + +  RSLL+ QR    +IPNCGE +S  QC Q+PKCRWCRS+ +D+ CF ++EA RLPQQVF CD
Subjt:  FLLLFFFCVSCNGL-PMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD

XP_038723734.1 uncharacterized protein LOC120015395 [Tripterygium wilfordii]3.8e-1650Show/hide
Query:  LSIFLLSFLLLFFF---CVSCNGLPMDRKTTFPTSDRSLLSSQRR---RDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD
        LSI LL  LL+F F     S +G+      +  TS RS+L+ QRR     ++IP+CG+ VS   CSQ+P+CRWCRSD +D+ CF++ EA RLPQQVF+CD
Subjt:  LSIFLLSFLLLFFF---CVSCNGLPMDRKTTFPTSDRSLLSSQRR---RDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD

TrEMBL top hitse value%identityAlignment
A0A067JNS3 Uncharacterized protein1.3e-1446.88Show/hide
Query:  SIFLLSFLLLFFFCVSCNGLPMDRKTTFPT---SDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD
        S    S  L+F   +  + L     T  P+   S RSLL++QR   Q+IPNC   V+  QCSQ+PKCRWC+S+ +D+ CF++ EA RLPQQVF CD
Subjt:  SIFLLSFLLLFFFCVSCNGLPMDRKTTFPT---SDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD

A0A0A0LX55 Uncharacterized protein1.0e-3577.45Show/hide
Query:  RSSDLPSPLSIFLLSFLLLFFFCVSCNGLPMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFS
        RSS L SPLSIFL+SF  LFFF +SCN L  DRK   P+S R+L S QRRRDQ+I NCGEKVSALQCSQ+PKCRWCRSD+ID+TCFTRAEALRLPQQVFS
Subjt:  RSSDLPSPLSIFLLSFLLLFFFCVSCNGLPMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFS

Query:  CD
        CD
Subjt:  CD

A0A1R3H5C1 Uncharacterized protein1.7e-1448.86Show/hide
Query:  FLLLFFFCVSCNGL-PMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD
        F +LF    + + L   D +  + +  RSLL+ QR    +IPNCGE +S  QC Q+PKCRWCRS+ +D+ CF ++EA RLPQQVF CD
Subjt:  FLLLFFFCVSCNGL-PMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD

A0A5A7TT10 Uncharacterized protein1.2e-2377.03Show/hide
Query:  LPMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD
        L  DRK   P+S R+L + QRRRDQ+I NCGEKVSA QCSQ+ KCRWCRSDVID+TCFTRAEALRLPQQVFSCD
Subjt:  LPMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD

A0A5J5VHJ9 Uncharacterized protein8.6e-1462.9Show/hide
Query:  RSLLSSQR-RRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD
        R LL+SQR  +  +IPNCGE+VS  QC Q+PKCRWCRS+ +D+ CF +AEA RLPQQVF C+
Subjt:  RSLLSSQR-RRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCATTTCCATGGGAAGGAGCTCCGATCTTCCCTCGCCGCTCTCCATTTTCCTCCTCTCCTTCCTCCTCTTATTCTTCTTCTGTGTCTCTTGCAATGGCTTACCCATGGA
TCGGAAAACCACCTTCCCCACTTCGGATCGCAGTTTATTGAGCTCCCAGAGGAGGAGAGACCAGAAGATCCCGAATTGCGGCGAGAAGGTTTCGGCGTTACAATGTTCGC
AGAGCCCCAAGTGTCGCTGGTGTCGGAGCGATGTAATCGACGAGACCTGCTTCACCAGAGCCGAGGCTTTGAGATTGCCCCAACAGGTCTTCTCCTGTGAT
mRNA sequenceShow/hide mRNA sequence
TCCATTTCCATGGGAAGGAGCTCCGATCTTCCCTCGCCGCTCTCCATTTTCCTCCTCTCCTTCCTCCTCTTATTCTTCTTCTGTGTCTCTTGCAATGGCTTACCCATGGA
TCGGAAAACCACCTTCCCCACTTCGGATCGCAGTTTATTGAGCTCCCAGAGGAGGAGAGACCAGAAGATCCCGAATTGCGGCGAGAAGGTTTCGGCGTTACAATGTTCGC
AGAGCCCCAAGTGTCGCTGGTGTCGGAGCGATGTAATCGACGAGACCTGCTTCACCAGAGCCGAGGCTTTGAGATTGCCCCAACAGGTCTTCTCCTGTGAT
Protein sequenceShow/hide protein sequence
SISMGRSSDLPSPLSIFLLSFLLLFFFCVSCNGLPMDRKTTFPTSDRSLLSSQRRRDQKIPNCGEKVSALQCSQSPKCRWCRSDVIDETCFTRAEALRLPQQVFSCD