; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013587 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013587
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein yippee-like
Genome locationscaffold402:2668997..2671932
RNA-Seq ExpressionMS013587
SyntenyMS013587
Gene Ontology termsGO:0000151 - ubiquitin ligase complex (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004910 - Yippee/Mis18/Cereblon
IPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146613.1 protein yippee-like At5g53940 isoform X1 [Cucumis sativus]1.6e-6695.28Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNC QGRAYLFSNVVN+T+GPKEERLMLSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNADAHPGSSDMENP
        ERWRIVEEMMEDLN DAHPGSSDMENP
Subjt:  ERWRIVEEMMEDLNADAHPGSSDMENP

XP_008442812.1 PREDICTED: protein yippee-like At5g53940 [Cucumis melo]2.2e-6694.49Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+FLVELEGRSYRCRFCNNNVALADDVLSRTFNC QGRAYLFSNVVN+T+GPKEERLMLSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNADAHPGSSDMENP
        ERWRIVEEMMEDLN DAHPGSSDMENP
Subjt:  ERWRIVEEMMEDLNADAHPGSSDMENP

XP_022140248.1 protein yippee-like At5g53940 [Momordica charantia]5.5e-70100Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNADAHPGSSDMENP
        ERWRIVEEMMEDLNADAHPGSSDMENP
Subjt:  ERWRIVEEMMEDLNADAHPGSSDMENP

XP_022927222.1 protein yippee-like At5g53940 [Cucurbita moschata]2.3e-6896.85Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNC QGRAYLFSNVVN+T+GPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNADAHPGSSDMENP
        ERWRIVEEMMEDLN DAHPGSSDMENP
Subjt:  ERWRIVEEMMEDLNADAHPGSSDMENP

XP_038893524.1 protein yippee-like At5g53940 [Benincasa hispida]1.8e-6592.91Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNC QG+AYLFSNVVN+T+GPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQ+YKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNADAHPGSSDMENP
        ERW IVEEMMEDLN DAH G SDMENP
Subjt:  ERWRIVEEMMEDLNADAHPGSSDMENP

TrEMBL top hitse value%identityAlignment
A0A0A0LRZ0 Protein yippee-like8.0e-6795.28Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNC QGRAYLFSNVVN+T+GPKEERLMLSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNADAHPGSSDMENP
        ERWRIVEEMMEDLN DAHPGSSDMENP
Subjt:  ERWRIVEEMMEDLNADAHPGSSDMENP

A0A1S3B6L5 Protein yippee-like1.0e-6694.49Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+FLVELEGRSYRCRFCNNNVALADDVLSRTFNC QGRAYLFSNVVN+T+GPKEERLMLSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNADAHPGSSDMENP
        ERWRIVEEMMEDLN DAHPGSSDMENP
Subjt:  ERWRIVEEMMEDLNADAHPGSSDMENP

A0A6J1CHK2 Protein yippee-like2.7e-70100Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNADAHPGSSDMENP
        ERWRIVEEMMEDLNADAHPGSSDMENP
Subjt:  ERWRIVEEMMEDLNADAHPGSSDMENP

A0A6J1EGK2 Protein yippee-like1.1e-6896.85Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNC QGRAYLFSNVVN+T+GPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNADAHPGSSDMENP
        ERWRIVEEMMEDLN DAHPGSSDMENP
Subjt:  ERWRIVEEMMEDLNADAHPGSSDMENP

A0A6J1KNK6 Protein yippee-like1.1e-6896.85Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNC QGRAYLFSNVVN+T+GPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNADAHPGSSDMENP
        ERWRIVEEMMEDLN DAHPGSSDMENP
Subjt:  ERWRIVEEMMEDLNADAHPGSSDMENP

SwissProt top hitse value%identityAlignment
P59234 Protein yippee-like9.2e-3659.05Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F++ LEG+ Y C+ C  ++AL+++++S++F+C+ G+AYLFS VVNVT+G  E R+M++GMHTV DIFC CCG I+GWKY T H+K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        ER++I
Subjt:  ERWRI

Q9C777 Protein yippee-like At3g112302.3e-3460.95Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+FLV LEG+SY C+ C  N+AL DDV+S++F  R G+AYLFS VVNV AG KE+R+M++GMHTV DI+C  CG  +GWKY    +K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        ER+++
Subjt:  ERWRI

Q9FN32 Protein yippee-like At5g539407.5e-4664.84Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F VELEGRSYRCRFC  ++AL DD++SR+F+CR+G+AYLF+  VN++ GP EERLMLSGMHTV DIFCCCCGQ +GWKY + H+K QKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEE--MMEDLNADAHPGSSDMEN
        ER RIV+E  +  ++  D H  +SD E+
Subjt:  ERWRIVEE--MMEDLNADAHPGSSDMEN

Q9LY56 Protein yippee-like At3g558903.6e-3255.24Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGRVF+V+LEG  Y C+ C  +++   D++S++F C+ GRAYLF+NVVNV+ G KE+R+M++G+H V DIFC  CG  +GWKY   H+K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        E ++I
Subjt:  ERWRI

Q9SR97 Protein yippee-like At3g089902.7e-3555.66Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F+++LEG  Y C++C  + A+ +D++S++F+C+ GRAYLF NVVNVT G KE R+M++G HTV DIFC  CG ++GWKY   +DK QKYKEGKF+L
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIV
        ER++++
Subjt:  ERWRIV

Arabidopsis top hitse value%identityAlignment
AT3G08990.1 Yippee family putative zinc-binding protein1.9e-3655.66Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F+++LEG  Y C++C  + A+ +D++S++F+C+ GRAYLF NVVNVT G KE R+M++G HTV DIFC  CG ++GWKY   +DK QKYKEGKF+L
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIV
        ER++++
Subjt:  ERWRIV

AT3G08990.2 Yippee family putative zinc-binding protein1.9e-3655.66Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F+++LEG  Y C++C  + A+ +D++S++F+C+ GRAYLF NVVNVT G KE R+M++G HTV DIFC  CG ++GWKY   +DK QKYKEGKF+L
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIV
        ER++++
Subjt:  ERWRIV

AT3G11230.1 Yippee family putative zinc-binding protein1.6e-3560.95Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+FLV LEG+SY C+ C  N+AL DDV+S++F  R G+AYLFS VVNV AG KE+R+M++GMHTV DI+C  CG  +GWKY    +K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        ER+++
Subjt:  ERWRI

AT3G11230.2 Yippee family putative zinc-binding protein1.6e-3560.95Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+FLV LEG+SY C+ C  N+AL DDV+S++F  R G+AYLFS VVNV AG KE+R+M++GMHTV DI+C  CG  +GWKY    +K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        ER+++
Subjt:  ERWRI

AT5G53940.1 Yippee family putative zinc-binding protein5.3e-4764.84Show/hide
Query:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL
        MGR+F VELEGRSYRCRFC  ++AL DD++SR+F+CR+G+AYLF+  VN++ GP EERLMLSGMHTV DIFCCCCGQ +GWKY + H+K QKYKEGKFVL
Subjt:  MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEE--MMEDLNADAHPGSSDMEN
        ER RIV+E  +  ++  D H  +SD E+
Subjt:  ERWRIVEE--MMEDLNADAHPGSSDMEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGATGCCGCTTCTGCAATAACAACGTTGCTCTTGCCGATGACGTCCTCTCTCGGACTTTCAATTGCCG
CCAAGGGAGGGCATACCTTTTCAGCAATGTAGTTAATGTGACAGCTGGACCCAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACTGTGGAAGATATTTTTTGTTGCT
GTTGCGGACAAATTCTTGGATGGAAATATGTAACTACACATGACAAATACCAAAAGTACAAGGAGGGAAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAAGAGATGATG
GAAGACTTAAATGCAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCT
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGATGCCGCTTCTGCAATAACAACGTTGCTCTTGCCGATGACGTCCTCTCTCGGACTTTCAATTGCCG
CCAAGGGAGGGCATACCTTTTCAGCAATGTAGTTAATGTGACAGCTGGACCCAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACTGTGGAAGATATTTTTTGTTGCT
GTTGCGGACAAATTCTTGGATGGAAATATGTAACTACACATGACAAATACCAAAAGTACAAGGAGGGAAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAAGAGATGATG
GAAGACTTAAATGCAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCT
Protein sequenceShow/hide protein sequence
MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMM
EDLNADAHPGSSDMENP