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MS013588 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013588
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold402:2688433..2688855
RNA-Seq ExpressionMS013588
SyntenyMS013588
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057006.1 hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa]1.8e-1344Show/hide
Query:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQ-------GFEFGPICCDDHDGGSGSGRRRIRDDDGQRW--LVVRNNSIR
        MGIH K P       S +++ ++ +SLSF+ YL  KDRE  S G I+T D+       GFEFG   C       GS    + D  G+R    +VRNNSIR
Subjt:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQ-------GFEFGPICCDDHDGGSGSGRRRIRDDDGQRW--LVVRNNSIR

Query:  RGGRRIKDEEEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ
        RG ++I++E+EES     W     SFV PCRECRASKP+ V   Q  PIQ
Subjt:  RGGRRIKDEEEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ

KAG6573282.1 hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2051.33Show/hide
Query:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFGPICCDDHDGGSGSGRRRIRDDDGQ---------RWLVVRNNSIR
        M +H K    PDISSS SSS   + SLSF+ ++T KDR+P+   +I+T DQ FEFG     +H GG      R R +  Q           L+VRN+SIR
Subjt:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFGPICCDDHDGGSGSGRRRIRDDDGQ---------RWLVVRNNSIR

Query:  RGGRRIKDEEEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ
        RGGRRI++EEEES+ S  W SVFRSFVSPCRECRASKP+ V   +A P+Q
Subjt:  RGGRRIKDEEEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ

KGN64696.1 hypothetical protein Csa_013090 [Cucumis sativus]3.7e-1142.67Show/hide
Query:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQ-------GFEFGPICCDDHDGGSGSGRRRIRDDDGQR--WLVVRNNSIR
        M IH K P         S++ ++ +SLSF+ YL  KDR+  S G I+T D+       GFEF P C     GGS         D G+R    +VRNNSI+
Subjt:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQ-------GFEFGPICCDDHDGGSGSGRRRIRDDDGQR--WLVVRNNSIR

Query:  RGGRRIKDEEEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ
        RG ++I +E++ES  S  W  +F  FV PCRECRA KPS V   Q  PIQ
Subjt:  RGGRRIKDEEEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ

XP_022139818.1 uncharacterized protein LOC111010640 [Momordica charantia]3.4e-73100Show/hide
Query:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFGPICCDDHDGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDE
        MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFGPICCDDHDGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDE
Subjt:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFGPICCDDHDGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDE

Query:  EEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ
        EEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ
Subjt:  EEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ

TrEMBL top hitse value%identityAlignment
A0A0A0LXF9 Uncharacterized protein1.8e-1142.67Show/hide
Query:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQ-------GFEFGPICCDDHDGGSGSGRRRIRDDDGQR--WLVVRNNSIR
        M IH K P         S++ ++ +SLSF+ YL  KDR+  S G I+T D+       GFEF P C     GGS         D G+R    +VRNNSI+
Subjt:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQ-------GFEFGPICCDDHDGGSGSGRRRIRDDDGQR--WLVVRNNSIR

Query:  RGGRRIKDEEEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ
        RG ++I +E++ES  S  W  +F  FV PCRECRA KPS V   Q  PIQ
Subjt:  RGGRRIKDEEEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ

A0A5D3DS79 Uncharacterized protein8.7e-1444Show/hide
Query:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQ-------GFEFGPICCDDHDGGSGSGRRRIRDDDGQRW--LVVRNNSIR
        MGIH K P       S +++ ++ +SLSF+ YL  KDRE  S G I+T D+       GFEFG   C       GS    + D  G+R    +VRNNSIR
Subjt:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQ-------GFEFGPICCDDHDGGSGSGRRRIRDDDGQRW--LVVRNNSIR

Query:  RGGRRIKDEEEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ
        RG ++I++E+EES     W     SFV PCRECRASKP+ V   Q  PIQ
Subjt:  RGGRRIKDEEEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ

A0A6J1CGL7 uncharacterized protein LOC1110106401.7e-73100Show/hide
Query:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFGPICCDDHDGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDE
        MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFGPICCDDHDGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDE
Subjt:  MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFGPICCDDHDGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDE

Query:  EEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ
        EEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ
Subjt:  EEESSSSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCACCCAAAGAACCCTGCGCAGCCCGATATCAGTAGCAGTGGAAGCTCGAGTTATTCGTTTAGCTCTTCTCTCTCCTTTGCTGCCTACTTAACTTGTAAAGA
CCGTGAACCCAATTCTGGGGGTCTGATCAAAACAGGAGACCAAGGATTCGAGTTTGGTCCGATTTGTTGCGATGATCATGATGGTGGCAGTGGCAGTGGCAGGCGAAGGA
TCAGAGATGATGATGGGCAGAGATGGTTGGTGGTAAGAAACAACAGTATCAGAAGAGGGGGTCGAAGGATCAAAGATGAAGAAGAGGAGTCGTCGTCGTCGACGTCGTGG
TCGAGCGTGTTTCGGTCGTTTGTTTCGCCGTGCAGGGAGTGCCGTGCCAGCAAGCCGAGTGCTGTAATTGAAGCGCAAGCGCATCCCATTCAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCCACCCAAAGAACCCTGCGCAGCCCGATATCAGTAGCAGTGGAAGCTCGAGTTATTCGTTTAGCTCTTCTCTCTCCTTTGCTGCCTACTTAACTTGTAAAGA
CCGTGAACCCAATTCTGGGGGTCTGATCAAAACAGGAGACCAAGGATTCGAGTTTGGTCCGATTTGTTGCGATGATCATGATGGTGGCAGTGGCAGTGGCAGGCGAAGGA
TCAGAGATGATGATGGGCAGAGATGGTTGGTGGTAAGAAACAACAGTATCAGAAGAGGGGGTCGAAGGATCAAAGATGAAGAAGAGGAGTCGTCGTCGTCGACGTCGTGG
TCGAGCGTGTTTCGGTCGTTTGTTTCGCCGTGCAGGGAGTGCCGTGCCAGCAAGCCGAGTGCTGTAATTGAAGCGCAAGCGCATCCCATTCAA
Protein sequenceShow/hide protein sequence
MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFGPICCDDHDGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDEEEESSSSTSW
SSVFRSFVSPCRECRASKPSAVIEAQAHPIQ