; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013594 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013594
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiondof zinc finger protein DOF5.6-like
Genome locationscaffold402:2722052..2722432
RNA-Seq ExpressionMS013594
SyntenyMS013594
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQM38538.1 dof zinc finger protein DOF1.4 [Prunus yedoensis var. nudiflora]5.7e-2768.54Show/hide
Query:  ATTTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPP
        A  T N+ Q     Q +KCPRC S NTKFCYYNNYSLSQPRYFCK+CRRYWTQGGTLRNVPVGGG RKGKRPK  +++++  SL P  P
Subjt:  ATTTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPP

XP_008442727.1 PREDICTED: dof zinc finger protein DOF2.2-like [Cucumis melo]3.4e-2762.39Show/hide
Query:  NEDQTTMKA--QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKIT------TAAAAVTSLPPPPPPAAAVEFA
        NEDQT      QK+KCPRC S NTKFCYYNNYSLSQPRYFCKSCRRYWT GGTLRNVP+GGGSRK KRPK T      +++   T+L PPPP  +     
Subjt:  NEDQTTMKA--QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKIT------TAAAAVTSLPPPPPPAAAVEFA

Query:  STSGGYLAS
        +T+  Y +S
Subjt:  STSGGYLAS

XP_011653263.1 dof zinc finger protein 4 [Cucumis sativus]4.4e-2759.48Show/hide
Query:  NEDQTTMKA--QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKIT------TAAAAVTSLPPPPPPAA-----
        NEDQT      QK+KCPRC S NTKFCYYNNYSLSQPRYFCKSCRRYWT GGTLRNVP+GGGSRK KRPK T      +++   T+L PPPP  +     
Subjt:  NEDQTTMKA--QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKIT------TAAAAVTSLPPPPPPAA-----

Query:  AVEFASTSGGYLASVE
        A    ++S  +L+S++
Subjt:  AVEFASTSGGYLASVE

XP_022140101.1 dof zinc finger protein DOF5.6-like [Momordica charantia]1.1e-65100Show/hide
Query:  ATTTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAAAVEFASTS
        ATTTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAAAVEFASTS
Subjt:  ATTTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAAAVEFASTS

Query:  GGYLASVESPQIFNQSTLDHVGVYSFG
        GGYLASVESPQIFNQSTLDHVGVYSFG
Subjt:  GGYLASVESPQIFNQSTLDHVGVYSFG

XP_038876987.1 dof zinc finger protein 4-like [Benincasa hispida]1.0e-2857.69Show/hide
Query:  NEDQTTMKA----QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKI----TTAAAAVTSLPPPPPPAAAVEFA
        NEDQ  MK     QK+KCPRC S NTKFCYYNNYSLSQPRYFCKSCRRYWT GGTLRNVP+GG SRK KRPK     + A+++ T+L PPPPPA      
Subjt:  NEDQTTMKA----QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKI----TTAAAAVTSLPPPPPPAAAVEFA

Query:  STSGGYLASVESPQIFNQSTLDHVGVYSFG
        + +  Y ++   P +        VG YSFG
Subjt:  STSGGYLASVESPQIFNQSTLDHVGVYSFG

TrEMBL top hitse value%identityAlignment
A0A0A0LXF4 Dof-type domain-containing protein2.1e-2759.48Show/hide
Query:  NEDQTTMKA--QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKIT------TAAAAVTSLPPPPPPAA-----
        NEDQT      QK+KCPRC S NTKFCYYNNYSLSQPRYFCKSCRRYWT GGTLRNVP+GGGSRK KRPK T      +++   T+L PPPP  +     
Subjt:  NEDQTTMKA--QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKIT------TAAAAVTSLPPPPPPAA-----

Query:  AVEFASTSGGYLASVE
        A    ++S  +L+S++
Subjt:  AVEFASTSGGYLASVE

A0A1S3B6E2 dof zinc finger protein DOF2.2-like1.6e-2762.39Show/hide
Query:  NEDQTTMKA--QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKIT------TAAAAVTSLPPPPPPAAAVEFA
        NEDQT      QK+KCPRC S NTKFCYYNNYSLSQPRYFCKSCRRYWT GGTLRNVP+GGGSRK KRPK T      +++   T+L PPPP  +     
Subjt:  NEDQTTMKA--QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKIT------TAAAAVTSLPPPPPPAAAVEFA

Query:  STSGGYLAS
        +T+  Y +S
Subjt:  STSGGYLAS

A0A5A7UU19 Dof zinc finger protein DOF2.2-like1.6e-2762.39Show/hide
Query:  NEDQTTMKA--QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKIT------TAAAAVTSLPPPPPPAAAVEFA
        NEDQT      QK+KCPRC S NTKFCYYNNYSLSQPRYFCKSCRRYWT GGTLRNVP+GGGSRK KRPK T      +++   T+L PPPP  +     
Subjt:  NEDQTTMKA--QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKIT------TAAAAVTSLPPPPPPAAAVEFA

Query:  STSGGYLAS
        +T+  Y +S
Subjt:  STSGGYLAS

A0A5B7C9U4 Putative dof zinc finger protein DOF5.4-like4.6e-3063.81Show/hide
Query:  QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPP----PAAAVEFASTSGGYLASVESP
        Q +KCPRC S NTKFCYYNNYSLSQPRYFCK+CRRYWTQGGTLRNVPVGGG RKGKRPK ++++  ++  PPPPP    PA +  + S  GG+L+S+ + 
Subjt:  QKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPP----PAAAVEFASTSGGYLASVESP

Query:  QIFNQ
        Q  +Q
Subjt:  QIFNQ

A0A6J1CET6 dof zinc finger protein DOF5.6-like5.2e-66100Show/hide
Query:  ATTTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAAAVEFASTS
        ATTTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAAAVEFASTS
Subjt:  ATTTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAAAVEFASTS

Query:  GGYLASVESPQIFNQSTLDHVGVYSFG
        GGYLASVESPQIFNQSTLDHVGVYSFG
Subjt:  GGYLASVESPQIFNQSTLDHVGVYSFG

SwissProt top hitse value%identityAlignment
B9F1L8 Dof zinc finger protein 23.6e-2470.27Show/hide
Query:  KAQKEK---CPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTS
        + QKEK   CPRC+S NTKFCYYNNYSL QPRYFCK+CRRYWT+GG+LRNVPVGGGSRK KR   +   +A  S
Subjt:  KAQKEK---CPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTS

Q43385 Dof zinc finger protein DOF3.71.1e-2360.23Show/hide
Query:  TTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPP
        T   E +     +K  CPRC+S NTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNVPVGG SRK KR     A+ +   LP   PP
Subjt:  TTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPP

Q6K537 Dof zinc finger protein 33.6e-2464.2Show/hide
Query:  MKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAA
        MK     CPRC+S  TKFCYYNNYS++QPRYFC+ CRRYWTQGG+LRNVPVGGG RK KR   ++A+A+  S P P   AA
Subjt:  MKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAA

Q9FM03 Dof zinc finger protein DOF5.66.2e-2454.9Show/hide
Query:  EKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAAAVEFASTSGGYLASVESPQIFNQS
        +KCPRC S +TKFCYYNNYSLSQPRYFCK+CRRYWT+GGTLRN+PVGGG RK K+P  + ++++ +S   P    + +  A+TS   +A   S Q +  S
Subjt:  EKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAAAVEFASTSGGYLASVESPQIFNQS

Query:  TL
         L
Subjt:  TL

Q9SXG8 Dof zinc finger protein 11.6e-2450.82Show/hide
Query:  ANEDQTTMKAQKEK---CPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTA----AAAVTSLPPPPPPAAAVEFA
        A   +   + QKEK   CPRC+S NTKFCYYNNYSL QPRYFCK+CRRYWT+GG+LRNVPVGGGSRK KR   + A    A+A T+       + ++  A
Subjt:  ANEDQTTMKAQKEK---CPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTA----AAAVTSLPPPPPPAAAVEFA

Query:  STSGGYLASVESPQIFNQSTLD
        ST GG   + ++P++ ++   D
Subjt:  STSGGYLASVESPQIFNQSTLD

Arabidopsis top hitse value%identityAlignment
AT3G61850.1 Dof-type zinc finger DNA-binding family protein7.5e-2560.23Show/hide
Query:  TTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPP
        T   E +     +K  CPRC+S NTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNVPVGG SRK KR     A+ +   LP   PP
Subjt:  TTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPP

AT3G61850.2 Dof-type zinc finger DNA-binding family protein7.5e-2560.23Show/hide
Query:  TTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPP
        T   E +     +K  CPRC+S NTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNVPVGG SRK KR     A+ +   LP   PP
Subjt:  TTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPP

AT3G61850.3 Dof-type zinc finger DNA-binding family protein7.5e-2560.23Show/hide
Query:  TTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPP
        T   E +     +K  CPRC+S NTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNVPVGG SRK KR     A+ +   LP   PP
Subjt:  TTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPP

AT3G61850.4 Dof-type zinc finger DNA-binding family protein7.5e-2560.23Show/hide
Query:  TTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPP
        T   E +     +K  CPRC+S NTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNVPVGG SRK KR     A+ +   LP   PP
Subjt:  TTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPP

AT5G62940.1 Dof-type zinc finger DNA-binding family protein4.4e-2554.9Show/hide
Query:  EKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAAAVEFASTSGGYLASVESPQIFNQS
        +KCPRC S +TKFCYYNNYSLSQPRYFCK+CRRYWT+GGTLRN+PVGGG RK K+P  + ++++ +S   P    + +  A+TS   +A   S Q +  S
Subjt:  EKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAAAVEFASTSGGYLASVESPQIFNQS

Query:  TL
         L
Subjt:  TL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCACTACTACTGCAAATGAAGATCAGACGACGATGAAGGCACAGAAAGAGAAATGCCCTCGCTGTCACTCCTTCAACACCAAATTCTGTTACTATAATAATTACAGCCT
CTCACAGCCACGCTATTTTTGCAAGTCATGTAGAAGGTACTGGACTCAAGGCGGCACCCTCCGTAACGTCCCCGTCGGCGGCGGTTCTAGAAAAGGAAAGCGTCCCAAAA
TAACCACCGCTGCCGCCGCCGTCACGTCACTGCCTCCTCCTCCTCCTCCTGCGGCGGCGGTAGAATTTGCCAGTACTAGTGGTGGGTATTTGGCGTCTGTGGAGTCGCCG
CAGATTTTCAATCAGTCTACTCTCGATCATGTGGGGGTTTATTCGTTTGGA
mRNA sequenceShow/hide mRNA sequence
GCCACTACTACTGCAAATGAAGATCAGACGACGATGAAGGCACAGAAAGAGAAATGCCCTCGCTGTCACTCCTTCAACACCAAATTCTGTTACTATAATAATTACAGCCT
CTCACAGCCACGCTATTTTTGCAAGTCATGTAGAAGGTACTGGACTCAAGGCGGCACCCTCCGTAACGTCCCCGTCGGCGGCGGTTCTAGAAAAGGAAAGCGTCCCAAAA
TAACCACCGCTGCCGCCGCCGTCACGTCACTGCCTCCTCCTCCTCCTCCTGCGGCGGCGGTAGAATTTGCCAGTACTAGTGGTGGGTATTTGGCGTCTGTGGAGTCGCCG
CAGATTTTCAATCAGTCTACTCTCGATCATGTGGGGGTTTATTCGTTTGGA
Protein sequenceShow/hide protein sequence
ATTTANEDQTTMKAQKEKCPRCHSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGSRKGKRPKITTAAAAVTSLPPPPPPAAAVEFASTSGGYLASVESP
QIFNQSTLDHVGVYSFG