; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013610 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013610
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase RMA1H1-like
Genome locationscaffold402:2818315..2819034
RNA-Seq ExpressionMS013610
SyntenyMS013610
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0071712 - ER-associated misfolded protein catabolic process (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016020 - membrane (cellular component)
GO:0044390 - ubiquitin-like protein conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR045103 - E3 ubiquitin-protein ligase RNF5/RNF185-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442466.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo]6.0e-10274.17Show/hide
Query:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE
        MAFEHY SHGWRKQ+PA+MANSE FK CFDC+ICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKADISHT M+PLYG GQSAE  E
Subjt:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE

Query:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS
         DA+  LIPPRPSAFG+KAL +IRSNNAS Q   Y +  QNQ+YNFD YDS+EEDS SSLF+LE +P  S HHP A + G  VY R++G+SE +Y +PNS
Subjt:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS

Query:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
        Y  +GS+SPRLRRQE++AEKSLNRISF LFCC +LCL +F
Subjt:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

XP_011653163.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus]5.6e-10072.5Show/hide
Query:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE
        M FEHY SHGWRKQ+PA+M NSE FK CFDC+ICLDFAS+PIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKA+ISHT M+PLYG GQSAE  E
Subjt:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE

Query:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS
        VDA+ +LIPPRPSAFG+KAL +IRSNNAS Q   Y +  QNQ+YNFD YDS+EEDS SSLF+LE +P  S HHP A M GE VY R + +SE +Y +PNS
Subjt:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS

Query:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
        Y  +GS+SPRLRRQE++AEKSLN+I F LFCC +LCL +F
Subjt:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

XP_022140107.1 E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia]1.2e-13798.75Show/hide
Query:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE
        MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHT MIPLYGHGQSAEDDE
Subjt:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE

Query:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS
        VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDS+EEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS
Subjt:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS

Query:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
        YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVL LIIF
Subjt:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

XP_023519102.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo]5.8e-9774.27Show/hide
Query:  MAFEHYLSHGWRKQVPA-AMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDD
        MAFEHY S  WR+ VPA +M NSE FKACFDC+ICL+FASEPIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKADISHT M+PLYG GQSA++ 
Subjt:  MAFEHYLSHGWRKQVPA-AMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDD

Query:  EVDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPN
        EVD + LLIPPRPSAFG+K L SI SNNASG+ L Y + YQNQ+ NFD YDS+EEDSSSSLFN+E +P  SF HP ARMFGE VY R+FG+SE LY +PN
Subjt:  EVDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPN

Query:  SYPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
        SY  TGS SP+LR Q    EKSLNRIS  LFCC VLCL IF
Subjt:  SYPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

XP_038895713.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida]3.1e-10677.92Show/hide
Query:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE
        MAFEHY  HGWR+QVPAAMANSE FK CFDC+ICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKA+ISHT M+PLYG GQSAED E
Subjt:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE

Query:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS
        VDA+ LLIPPRPSAFG+KAL +IRSN ASGQ   Y + YQNQ YNFD YDS+EEDSSSSLFNLE     S HHP A MF E VY R FGNSE +YT+P+S
Subjt:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS

Query:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
        Y  +G+SSPRLRRQE+LAEKSLNRIS  LFCC VLCL++F
Subjt:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

TrEMBL top hitse value%identityAlignment
A0A0A0LUK5 RING-type domain-containing protein2.7e-10072.5Show/hide
Query:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE
        M FEHY SHGWRKQ+PA+M NSE FK CFDC+ICLDFAS+PIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKA+ISHT M+PLYG GQSAE  E
Subjt:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE

Query:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS
        VDA+ +LIPPRPSAFG+KAL +IRSNNAS Q   Y +  QNQ+YNFD YDS+EEDS SSLF+LE +P  S HHP A M GE VY R + +SE +Y +PNS
Subjt:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS

Query:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
        Y  +GS+SPRLRRQE++AEKSLN+I F LFCC +LCL +F
Subjt:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

A0A1S3B6D8 E3 ubiquitin-protein ligase RMA1H1-like2.9e-10274.17Show/hide
Query:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE
        MAFEHY SHGWRKQ+PA+MANSE FK CFDC+ICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKADISHT M+PLYG GQSAE  E
Subjt:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE

Query:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS
         DA+  LIPPRPSAFG+KAL +IRSNNAS Q   Y +  QNQ+YNFD YDS+EEDS SSLF+LE +P  S HHP A + G  VY R++G+SE +Y +PNS
Subjt:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS

Query:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
        Y  +GS+SPRLRRQE++AEKSLNRISF LFCC +LCL +F
Subjt:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

A0A5A7UTV8 E3 ubiquitin-protein ligase RMA1H1-like2.9e-10274.17Show/hide
Query:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE
        MAFEHY SHGWRKQ+PA+MANSE FK CFDC+ICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKADISHT M+PLYG GQSAE  E
Subjt:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE

Query:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS
         DA+  LIPPRPSAFG+KAL +IRSNNAS Q   Y +  QNQ+YNFD YDS+EEDS SSLF+LE +P  S HHP A + G  VY R++G+SE +Y +PNS
Subjt:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS

Query:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
        Y  +GS+SPRLRRQE++AEKSLNRISF LFCC +LCL +F
Subjt:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

A0A6J1CFW3 E3 ubiquitin-protein ligase RMA1H1-like5.6e-13898.75Show/hide
Query:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE
        MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHT MIPLYGHGQSAEDDE
Subjt:  MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDE

Query:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS
        VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDS+EEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS
Subjt:  VDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNS

Query:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
        YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVL LIIF
Subjt:  YPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

A0A6J1EJS4 E3 ubiquitin-protein ligase RMA1H1-like2.4e-9673.44Show/hide
Query:  MAFEHYLSHGWRKQVPA-AMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDD
        MAFEHY S  WR+ VPA +M NSE FKACFDC+ICL+FASEPIVTLCGHLYCWPCIYKWLH+QSASL PDEPPQCPVCKADISHT M+PLYG  QSA++ 
Subjt:  MAFEHYLSHGWRKQVPA-AMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDD

Query:  EVDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPN
        EVD + LLIPPRPSAFG+K L SI SNNASG+ L Y + YQNQ+ NFD YDS+EEDSSSSLFN+E +P  SF HP ARMFGE VY R+FG+SE LY +PN
Subjt:  EVDAKELLIPPRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPN

Query:  SYPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
        SY  TGS SP+LR Q    EKSLNRIS  LFCC VLCL IF
Subjt:  SYPQTGSSSPRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

SwissProt top hitse value%identityAlignment
O64425 E3 ubiquitin-protein ligase RMA11.5e-3439.53Show/hide
Query:  FDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPD--EPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRPSAFGDKALGSIRSN
        FDC+ICLD   EP+VTLCGHL+CWPCI+KWL VQS S   +     QCPVCK+ +SH+ ++PLYG G+    +E    +  +P RP     +        
Subjt:  FDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPD--EPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRPSAFGDKALGSIRSN

Query:  NASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNS-EGLYTYPNSYPQTGSSSPRLRRQEMLAEKSLNRI
         ++   L  R  + +    + P       +S S          +   PV  M GEMV TR+FG      + YP++Y   G+S PR+RR+ M A+KSL RI
Subjt:  NASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNS-EGLYTYPNSYPQTGSSSPRLRRQEMLAEKSLNRI

Query:  SFSLFCCLVLCLIIF
         F   CC+VLCL++F
Subjt:  SFSLFCCLVLCLIIF

P93030 E3 ubiquitin-protein ligase RMA24.7e-2534.25Show/hide
Query:  FDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL-------GPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRPSAFGDKALG
        FDC+ICLD   +P+VTLCGHL+CWPCI+KW +  + S           EPP+CPVCK+D+S   ++P+YG GQ A     +     +P RP+       G
Subjt:  FDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL-------GPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRPSAFGDKALG

Query:  SIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNSYPQTGSSSPRLRRQEMLAEKS
         +      GQ L      ++Q Y +   D                       PV  +  EMVY R+FG S       N  P     + R RR+ M AE+S
Subjt:  SIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNSYPQTGSSSPRLRRQEMLAEKS

Query:  LNRISFSLFCCLVLCLIIF
        L+R+   L C + +CL +F
Subjt:  LNRISFSLFCCLVLCLIIF

Q6R567 E3 ubiquitin-protein ligase RMA1H12.9e-4347.37Show/hide
Query:  ENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL--GPDEPPQCPVCKADISHTKMIPLYGH-GQSAEDDEVDAKELLI-----PPRPSA
        EN    FDC+ICLD   EP++TLCGHLYCWPCIYKW++ QS S      + PQCPVCKA++S   +IPLYG  GQS +  E  A  L I     PP P  
Subjt:  ENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL--GPDEPPQCPVCKADISHTKMIPLYGH-GQSAEDDEVDAKELLI-----PPRPSA

Query:  FGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDP-YDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSE-GLYTYPNSYPQTGSSSPRLR
         G   L +  SN +    L  R  YQ QS    P Y       SS + +     A+   H    M GE+ Y R+FGNS   +YTYPNSY    SSSPR+R
Subjt:  FGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDP-YDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSE-GLYTYPNSYPQTGSSSPRLR

Query:  RQEMLAEKSLNRISFSLFCCLVLCLIIF
        RQ   A++SL RI F LFCC V CLI+F
Subjt:  RQEMLAEKSLNRISFSLFCCLVLCLIIF

Q8GUK7 E3 ubiquitin-protein ligase RMA32.2e-3840.95Show/hide
Query:  AAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDE-PPQCPVCKADISHTKMIPLYGHGQSAEDD-----EVDAKELLIP-
        A  A   N   CFDC+ICLD A +P+VTLCGHL+CWPCIYKWLHVQ +S+  D+    CPVCK++I+ T ++PLYG G S+        + DA    IP 
Subjt:  AAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDE-PPQCPVCKADISHTKMIPLYGHGQSAEDD-----EVDAKELLIP-

Query:  -PRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNSYPQTGSSS
         P PSA  +  + S  S N S QH      + N  Y+   + + E    ++   +      SF +PV  MFG++VYTR+FG      T+ N+  Q   S 
Subjt:  -PRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNSYPQTGSSS

Query:  PRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
          ++R     EKSLNR+S    CC++LCL++F
Subjt:  PRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

Q99942 E3 ubiquitin-protein ligase RNF52.5e-1847.67Show/hide
Query:  ACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRP
        A F+C+ICL+ A E +V++CGHLYCWPC+++WL  +       E  +CPVCKA IS  K++PLYG G     D      L  PPRP
Subjt:  ACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRP

Arabidopsis top hitse value%identityAlignment
AT1G19310.1 RING/U-box superfamily protein5.9e-2350.54Show/hide
Query:  SENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDA-KELLIPPRPS
        + N  + F+C+ICLD A +PIVTLCGHL+CWPC+YKWLH+ S S        CPVCKA I   +++PLYG G+S+ D    +   L +P RPS
Subjt:  SENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDA-KELLIPPRPS

AT4G03510.1 RING membrane-anchor 11.0e-3539.53Show/hide
Query:  FDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPD--EPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRPSAFGDKALGSIRSN
        FDC+ICLD   EP+VTLCGHL+CWPCI+KWL VQS S   +     QCPVCK+ +SH+ ++PLYG G+    +E    +  +P RP     +        
Subjt:  FDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPD--EPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRPSAFGDKALGSIRSN

Query:  NASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNS-EGLYTYPNSYPQTGSSSPRLRRQEMLAEKSLNRI
         ++   L  R  + +    + P       +S S          +   PV  M GEMV TR+FG      + YP++Y   G+S PR+RR+ M A+KSL RI
Subjt:  NASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNS-EGLYTYPNSYPQTGSSSPRLRRQEMLAEKSLNRI

Query:  SFSLFCCLVLCLIIF
         F   CC+VLCL++F
Subjt:  SFSLFCCLVLCLIIF

AT4G03510.2 RING membrane-anchor 11.0e-3539.53Show/hide
Query:  FDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPD--EPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRPSAFGDKALGSIRSN
        FDC+ICLD   EP+VTLCGHL+CWPCI+KWL VQS S   +     QCPVCK+ +SH+ ++PLYG G+    +E    +  +P RP     +        
Subjt:  FDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPD--EPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRPSAFGDKALGSIRSN

Query:  NASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNS-EGLYTYPNSYPQTGSSSPRLRRQEMLAEKSLNRI
         ++   L  R  + +    + P       +S S          +   PV  M GEMV TR+FG      + YP++Y   G+S PR+RR+ M A+KSL RI
Subjt:  NASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNS-EGLYTYPNSYPQTGSSSPRLRRQEMLAEKSLNRI

Query:  SFSLFCCLVLCLIIF
         F   CC+VLCL++F
Subjt:  SFSLFCCLVLCLIIF

AT4G27470.1 RING membrane-anchor 31.6e-3940.95Show/hide
Query:  AAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDE-PPQCPVCKADISHTKMIPLYGHGQSAEDD-----EVDAKELLIP-
        A  A   N   CFDC+ICLD A +P+VTLCGHL+CWPCIYKWLHVQ +S+  D+    CPVCK++I+ T ++PLYG G S+        + DA    IP 
Subjt:  AAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDE-PPQCPVCKADISHTKMIPLYGHGQSAEDD-----EVDAKELLIP-

Query:  -PRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNSYPQTGSSS
         P PSA  +  + S  S N S QH      + N  Y+   + + E    ++   +      SF +PV  MFG++VYTR+FG      T+ N+  Q   S 
Subjt:  -PRPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNSYPQTGSSS

Query:  PRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF
          ++R     EKSLNR+S    CC++LCL++F
Subjt:  PRLRRQEMLAEKSLNRISFSLFCCLVLCLIIF

AT4G28270.1 RING membrane-anchor 23.4e-2634.25Show/hide
Query:  FDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL-------GPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRPSAFGDKALG
        FDC+ICLD   +P+VTLCGHL+CWPCI+KW +  + S           EPP+CPVCK+D+S   ++P+YG GQ A     +     +P RP+       G
Subjt:  FDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL-------GPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPPRPSAFGDKALG

Query:  SIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNSYPQTGSSSPRLRRQEMLAEKS
         +      GQ L      ++Q Y +   D                       PV  +  EMVY R+FG S       N  P     + R RR+ M AE+S
Subjt:  SIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNSYPQTGSSSPRLRRQEMLAEKS

Query:  LNRISFSLFCCLVLCLIIF
        L+R+   L C + +CL +F
Subjt:  LNRISFSLFCCLVLCLIIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTTGAGCACTACCTTTCGCATGGCTGGAGGAAGCAGGTTCCAGCTGCAATGGCAAACTCTGAGAACTTTAAGGCTTGCTTTGACTGCAGTATTTGCTTAGACTT
TGCATCTGAGCCTATAGTGACTCTGTGCGGCCATCTCTACTGCTGGCCTTGCATTTACAAGTGGCTTCATGTCCAGAGCGCCTCCCTCGGCCCTGACGAGCCTCCGCAGT
GCCCGGTTTGCAAGGCCGATATTTCCCACACGAAAATGATCCCTCTCTACGGCCATGGTCAATCGGCAGAGGATGATGAGGTTGATGCCAAAGAGTTACTTATACCTCCT
AGGCCATCAGCTTTTGGCGACAAGGCTCTGGGATCTATCAGATCTAATAATGCTTCTGGTCAGCACCTTCCTTATAGAAACCCATATCAGAATCAAAGCTACAACTTTGA
TCCGTATGACAGCTTTGAAGAGGACTCGAGCAGTTCGTTATTTAACCTCGAACACGACCCAGCCGATAGTTTTCATCATCCAGTGGCCAGGATGTTTGGAGAGATGGTGT
ATACTAGGATGTTTGGGAATTCAGAGGGCTTATACACATACCCGAATTCTTATCCTCAGACCGGGAGCAGCAGTCCGCGATTGAGAAGGCAGGAAATGCTAGCAGAGAAA
TCGCTTAACAGGATATCATTTTCTCTCTTCTGTTGCTTAGTTCTATGTCTTATTATCTTC
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTTGAGCACTACCTTTCGCATGGCTGGAGGAAGCAGGTTCCAGCTGCAATGGCAAACTCTGAGAACTTTAAGGCTTGCTTTGACTGCAGTATTTGCTTAGACTT
TGCATCTGAGCCTATAGTGACTCTGTGCGGCCATCTCTACTGCTGGCCTTGCATTTACAAGTGGCTTCATGTCCAGAGCGCCTCCCTCGGCCCTGACGAGCCTCCGCAGT
GCCCGGTTTGCAAGGCCGATATTTCCCACACGAAAATGATCCCTCTCTACGGCCATGGTCAATCGGCAGAGGATGATGAGGTTGATGCCAAAGAGTTACTTATACCTCCT
AGGCCATCAGCTTTTGGCGACAAGGCTCTGGGATCTATCAGATCTAATAATGCTTCTGGTCAGCACCTTCCTTATAGAAACCCATATCAGAATCAAAGCTACAACTTTGA
TCCGTATGACAGCTTTGAAGAGGACTCGAGCAGTTCGTTATTTAACCTCGAACACGACCCAGCCGATAGTTTTCATCATCCAGTGGCCAGGATGTTTGGAGAGATGGTGT
ATACTAGGATGTTTGGGAATTCAGAGGGCTTATACACATACCCGAATTCTTATCCTCAGACCGGGAGCAGCAGTCCGCGATTGAGAAGGCAGGAAATGCTAGCAGAGAAA
TCGCTTAACAGGATATCATTTTCTCTCTTCTGTTGCTTAGTTCTATGTCTTATTATCTTC
Protein sequenceShow/hide protein sequence
MAFEHYLSHGWRKQVPAAMANSENFKACFDCSICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLGPDEPPQCPVCKADISHTKMIPLYGHGQSAEDDEVDAKELLIPP
RPSAFGDKALGSIRSNNASGQHLPYRNPYQNQSYNFDPYDSFEEDSSSSLFNLEHDPADSFHHPVARMFGEMVYTRMFGNSEGLYTYPNSYPQTGSSSPRLRRQEMLAEK
SLNRISFSLFCCLVLCLIIF