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MS013623 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013623
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1218)
Genome locationscaffold402:2896785..2897779
RNA-Seq ExpressionMS013623
SyntenyMS013623
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573252.1 hypothetical protein SDJN03_27139, partial [Cucurbita argyrosperma subsp. sororia]6.1e-7188.74Show/hide
Query:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
        A VVQSGN++FCAYDSDIATGLGVGSLL LFASQVI+MVASRCLCCGK+LRPSGSRAWA+TLFITCWVCF+IAE CLLAASVRNAYHTKY+SSI+NE+IS
Subjt:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS

Query:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
        CKMLR+GVFGAGAAFIVFTCVASELFY+SFSKAH+QTSSFAKDTGIRMA++
Subjt:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL

XP_022139805.1 uncharacterized protein LOC111010632 [Momordica charantia]1.2e-77100Show/hide
Query:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
        AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
Subjt:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS

Query:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
        CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
Subjt:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL

XP_022954617.1 uncharacterized protein LOC111456828 [Cucurbita moschata]3.6e-7189.4Show/hide
Query:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
        A VVQSGN++FCAYDSDIATGLGVGSLL LFASQVI+MVASRCLCCGK+LRPSGSRAWA+TLFITCWVCFLIAE CLLAASVRNAYHTKY+SSI+NE+IS
Subjt:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS

Query:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
        CKMLR+GVFGAGAAFIVFTCVASELFY+SFSKAH+QTSSFAKDTGIRMA++
Subjt:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL

XP_022994479.1 uncharacterized protein LOC111490189 [Cucurbita maxima]3.4e-6988.08Show/hide
Query:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
        A VV SGN++FCAYDSDIATGLGVGSLL LFASQVI+MVASRCLC GK+LRPSGSRAWA+TLFITCWVCFLIAE CLLAASVRNAYHTKY+SSI+NE+IS
Subjt:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS

Query:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
        CKMLR+G+FGAGAAFIVFTCVASELFYVSFSKAH+QTSSFAKDTGIRMA++
Subjt:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL

XP_023542784.1 uncharacterized protein LOC111802591 [Cucurbita pepo subsp. pepo]8.0e-7188.74Show/hide
Query:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
        A VVQSGN++FCAYDSDIATGLGVGSLL LFA+QVI+MVASRCLCCGK+LRPSGSRAWA+TLFITCWVCFLIAE CLLAASVRNAYHTKY+SSI+NE+IS
Subjt:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS

Query:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
        CKMLR+GVFGAGAAFIVFTCVASELFY+SFSKAH+QTSSFAKDTGIRMA++
Subjt:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL

TrEMBL top hitse value%identityAlignment
A0A1S3B5C0 uncharacterized protein LOC1034861886.2e-6986.75Show/hide
Query:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
        A V QSGN+RFCAYDSDIATGLGVGS L LFASQVI+MVASRCLCCG+ LRP GSRAWA+TLFITCW+CF IAE CLLAASVRNAYHTKY+SSI+NEQIS
Subjt:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS

Query:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
        CKMLR+GVFGAGAAFIVFTCVASELFYVSFSKAH +T+SFAKDTGIRMA+L
Subjt:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL

A0A5A7UTY8 DnaJ subfamily C member 226.2e-6986.75Show/hide
Query:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
        A V QSGN+RFCAYDSDIATGLGVGS L LFASQVI+MVASRCLCCG+ LRP GSRAWA+TLFITCW+CF IAE CLLAASVRNAYHTKY+SSI+NEQIS
Subjt:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS

Query:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
        CKMLR+GVFGAGAAFIVFTCVASELFYVSFSKAH +T+SFAKDTGIRMA+L
Subjt:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL

A0A6J1CEZ1 uncharacterized protein LOC1110106325.6e-78100Show/hide
Query:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
        AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
Subjt:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS

Query:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
        CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
Subjt:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL

A0A6J1GRF5 uncharacterized protein LOC1114568281.7e-7189.4Show/hide
Query:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
        A VVQSGN++FCAYDSDIATGLGVGSLL LFASQVI+MVASRCLCCGK+LRPSGSRAWA+TLFITCWVCFLIAE CLLAASVRNAYHTKY+SSI+NE+IS
Subjt:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS

Query:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
        CKMLR+GVFGAGAAFIVFTCVASELFY+SFSKAH+QTSSFAKDTGIRMA++
Subjt:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL

A0A6J1K1A5 uncharacterized protein LOC1114901891.6e-6988.08Show/hide
Query:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS
        A VV SGN++FCAYDSDIATGLGVGSLL LFASQVI+MVASRCLC GK+LRPSGSRAWA+TLFITCWVCFLIAE CLLAASVRNAYHTKY+SSI+NE+IS
Subjt:  AAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQIS

Query:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
        CKMLR+G+FGAGAAFIVFTCVASELFYVSFSKAH+QTSSFAKDTGIRMA++
Subjt:  CKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13380.1 Protein of unknown function (DUF1218)5.4e-3350Show/hide
Query:  NTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQISCKMLRKG
        NT FC YDSD+ATG GVG+ LFL +S+ ++M  ++C+C G+ L P   RAW++  FI+ W+ FL+AE C++A + +NAYHTKY+SS   +  SC  LRKG
Subjt:  NTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQISCKMLRKG

Query:  VFGAGAAFIVFTCVASELFYVSFSKA
        +F AGA FIV T V +  +Y+ F+K+
Subjt:  VFGAGAAFIVFTCVASELFYVSFSKA

AT1G52910.1 Protein of unknown function (DUF1218)8.6e-3958.39Show/hide
Query:  VVQSGNTRF--CAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKY--MSSIVNEQ
        VV  G   F  C Y SDIAT  G G+ + LF SQVIIMVASRC CCGK+L+P GSRA  + LF+ CWV FLIAE CLLA S+RNAYHT Y  M +I N  
Subjt:  VVQSGNTRF--CAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKY--MSSIVNEQ

Query:  ISCKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHD
         SC+++RKGVF AGA+F +FT + S+ +Y+S+S+A D
Subjt:  ISCKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHD

AT1G61065.1 Protein of unknown function (DUF1218)1.7e-4761.78Show/hide
Query:  RSLLWQAAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSI
        R   WQ +  +S +  +C YD DIATGLGVGS L L ASQ++IMVASRCLCCG++L PSGSR+WA+ LFIT WV F IA+ CLLA SVRNAYHTKY    
Subjt:  RSLLWQAAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSI

Query:  VNEQISCKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL
         N   SC+ LRKGVFGAGAAFIV T + SEL+YV+ S+A D   S  +D GIRM++L
Subjt:  VNEQISCKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL

AT3G15480.1 Protein of unknown function (DUF1218)8.6e-3959.52Show/hide
Query:  FCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSS-IVNEQISCKMLRKGVF
        +C Y +DIAT  G G+ + LF SQV+IM ASRC CCGKSL P GSRA A+ LF+ CWV FLIAE CLLAAS+RNAYHT+Y     V +  SC+++RKGVF
Subjt:  FCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSS-IVNEQISCKMLRKGVF

Query:  GAGAAFIVFTCVASELFYVSFSKAHD
         AGAAF +FT + S+ +YV +S+A D
Subjt:  GAGAAFIVFTCVASELFYVSFSKAHD

AT4G27435.1 Protein of unknown function (DUF1218)5.2e-3652.48Show/hide
Query:  AAVVQSGNTR--FCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQ
        A VVQ    +  +C YDSD ATG GVG+ LF  ASQ++IM+ SRC CCGK L+P GSRA A+ LFI  W+ FLIAE CLLA SV NAYHTKY +  ++  
Subjt:  AAVVQSGNTR--FCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQ

Query:  ISCKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSS
          C+ LRKGVF AGA+F+ F  + S+ +Y  +  A + + S
Subjt:  ISCKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGCTCCCTTCTTTGGCAGGCTGCGGTCGTTCAATCAGGCAATACTAGATTCTGTGCCTATGATTCTGATATTGCAACTGGCTTAGGTGTGGGTTCACTTCTGTTCCTATT
TGCTAGCCAAGTGATCATAATGGTGGCAAGCCGATGCTTATGCTGCGGTAAGTCTTTGCGACCCAGCGGTTCGAGGGCTTGGGCAGTGACCCTTTTCATCACTTGCTGGG
TATGTTTTCTCATTGCTGAGACATGTCTGCTGGCGGCTTCGGTGCGGAATGCCTATCATACCAAATATATGAGCTCTATTGTGAACGAGCAAATTTCGTGCAAGATGCTG
AGGAAGGGAGTGTTCGGGGCCGGGGCTGCTTTCATTGTCTTCACATGTGTAGCATCGGAGCTCTTCTATGTTAGCTTTTCCAAGGCTCATGACCAGACTTCCTCCTTCGC
CAAGGACACTGGCATTAGAATGGCAAACCTA
mRNA sequenceShow/hide mRNA sequence
CGCTCCCTTCTTTGGCAGGCTGCGGTCGTTCAATCAGGCAATACTAGATTCTGTGCCTATGATTCTGATATTGCAACTGGCTTAGGTGTGGGTTCACTTCTGTTCCTATT
TGCTAGCCAAGTGATCATAATGGTGGCAAGCCGATGCTTATGCTGCGGTAAGTCTTTGCGACCCAGCGGTTCGAGGGCTTGGGCAGTGACCCTTTTCATCACTTGCTGGG
TATGTTTTCTCATTGCTGAGACATGTCTGCTGGCGGCTTCGGTGCGGAATGCCTATCATACCAAATATATGAGCTCTATTGTGAACGAGCAAATTTCGTGCAAGATGCTG
AGGAAGGGAGTGTTCGGGGCCGGGGCTGCTTTCATTGTCTTCACATGTGTAGCATCGGAGCTCTTCTATGTTAGCTTTTCCAAGGCTCATGACCAGACTTCCTCCTTCGC
CAAGGACACTGGCATTAGAATGGCAAACCTA
Protein sequenceShow/hide protein sequence
RSLLWQAAVVQSGNTRFCAYDSDIATGLGVGSLLFLFASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYMSSIVNEQISCKML
RKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL