; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013643 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013643
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationscaffold1457:86638..87075
RNA-Seq ExpressionMS013643
SyntenyMS013643
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152861.1 auxin-responsive protein SAUR50-like [Momordica charantia]2.9e-7597.95Show/hide
Query:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDH
        MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMS+ F+EDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDH
Subjt:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDH

Query:  EGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
        EGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
Subjt:  EGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY

XP_022964961.1 auxin-responsive protein SAUR72-like [Cucurbita moschata]2.2e-5478.38Show/hide
Query:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
        MA+ RS+  KRKNGI   KVVVEKLQKSLS  RK S+ ++   FDE VD+++VP+DVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
Subjt:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF

Query:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
        DHEGALTIPC P EVE ILA+QW+LESK DSRDA  WGT CKAIIQSY
Subjt:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY

XP_022970276.1 auxin-responsive protein SAUR72-like [Cucurbita maxima]6.3e-5478.38Show/hide
Query:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
        MA+ RS+  KRKNGI   KVVVEKLQKSLS  RK S  ++   FDE VD+++VP+DVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
Subjt:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF

Query:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
        DHEGALTIPC P EVE ILA+QW+LESK DSRDA  WGT CKAIIQSY
Subjt:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY

XP_023520338.1 auxin-responsive protein SAUR72-like [Cucurbita pepo subsp. pepo]2.8e-5478.38Show/hide
Query:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
        MA+ RS+  KRKNGI   KVVVEKLQKSLS  RK S+ ++   FDE VD+++VP+DVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
Subjt:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF

Query:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
        DHEGALTIPC P EVE ILA+QW+LESK DSRDA  WGT CKAIIQSY
Subjt:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY

XP_038895486.1 protein SMALL AUXIN UP-REGULATED RNA 10-like [Benincasa hispida]7.5e-5579.73Show/hide
Query:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRK-LSAMSN-GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
        MA+ R++  K+KNGI   KVVVEKLQKSLS  RK  +A SN  FDE VD++AVP+DVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
Subjt:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRK-LSAMSN-GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF

Query:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
        DHEGALTIPC P EVEKILA+QW+LESK DSRDAI WGT C+AIIQSY
Subjt:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY

TrEMBL top hitse value%identityAlignment
A0A0A0LSM9 Uncharacterized protein1.5e-5378.47Show/hide
Query:  RSVCTKRKNGIVKFKVVVEKLQKSLSLTRK--LSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEG
        +S   K+KN I   KVVVEKLQKSLS  RK      +  FDE VD++AVP+DVKEGHFAVVAVDG+EPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEG
Subjt:  RSVCTKRKNGIVKFKVVVEKLQKSLSLTRK--LSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEG

Query:  ALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
        ALTIPC PSEVEKILA+QW+LESK DSRDAI WGT CKAIIQSY
Subjt:  ALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY

A0A5D3DDN6 Auxin-responsive protein SAUR72-like2.2e-5276.39Show/hide
Query:  RSVCTKRKNGIVKFKVVVEKLQKSLSLTRK--LSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEG
        +S   K+KN I   KVVVEKLQKSLS  RK      +  FDE VD++AVP+DVKEGHFAVVAVDGE+P+RFVVPLSCLTHP FLRLLEQAAEEYGFDHEG
Subjt:  RSVCTKRKNGIVKFKVVVEKLQKSLSLTRK--LSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEG

Query:  ALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
        ALTIPC PSEVEKILA+QW+LESK DSRDA+ WGT CKAIIQSY
Subjt:  ALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY

A0A6J1DJ09 auxin-responsive protein SAUR50-like1.4e-7597.95Show/hide
Query:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDH
        MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMS+ F+EDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDH
Subjt:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDH

Query:  EGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
        EGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
Subjt:  EGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY

A0A6J1HKE4 auxin-responsive protein SAUR72-like1.1e-5478.38Show/hide
Query:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
        MA+ RS+  KRKNGI   KVVVEKLQKSLS  RK S+ ++   FDE VD+++VP+DVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
Subjt:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF

Query:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
        DHEGALTIPC P EVE ILA+QW+LESK DSRDA  WGT CKAIIQSY
Subjt:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY

A0A6J1I062 auxin-responsive protein SAUR72-like3.1e-5478.38Show/hide
Query:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
        MA+ RS+  KRKNGI   KVVVEKLQKSLS  RK S  ++   FDE VD+++VP+DVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF
Subjt:  MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGF

Query:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY
        DHEGALTIPC P EVE ILA+QW+LESK DSRDA  WGT CKAIIQSY
Subjt:  DHEGALTIPCHPSEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR507.4e-1341.41Show/hide
Query:  KRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPC
        K+ + + +  ++ + L++  SL +K      G+DED     +P DV +GHF V    GE   R++VP+S LTHP F  LL++A EE+GFDH+  LTIPC
Subjt:  KRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPC

P0DKL1 Auxin-responsive protein SAUR501.6e-1242.11Show/hide
Query:  RKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPC
        +K+    + F ++ D S +P DV +GHF V    GE   R++VP+SCL HP F  LL+++ EE+GF+H+  + IPC
Subjt:  RKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPC

Q9LTV3 Auxin-responsive protein SAUR722.0e-1041.76Show/hide
Query:  TSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCHPSEVEKILAD-QWQLESKTDSRDAIAWGT
        TS+VP    EGH  V    G+E +RFVV    L HP+F+ LL ++A+EYG++ +G L IPCH    E+I+   +  L    D +D I  GT
Subjt:  TSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCHPSEVEKILAD-QWQLESKTDSRDAIAWGT

Q9SGU2 Auxin-responsive protein SAUR715.8e-1049.21Show/hide
Query:  VKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCHPSEVEKIL
        V EGH  V    G E +RFVV    L HP+F+ LL+Q+A+EYG++ +G L IPCH    E+IL
Subjt:  VKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCHPSEVEKIL

Q9ZUZ3 Auxin-responsive protein SAUR322.1e-1241.24Show/hide
Query:  EKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAV-VAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCHPSEVEKILA
        EK  KS  L RK              S   KDV +G  A+ V   GEE +RF+VP+    HP+F++LL++A +EYGFD +G +TIPCH  E   + A
Subjt:  EKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAV-VAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCHPSEVEKILA

Arabidopsis top hitse value%identityAlignment
AT2G21220.1 SAUR-like auxin-responsive protein family1.5e-1340.2Show/hide
Query:  VCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTI
        +  KR + + +  ++ + L++  SL     A +  +DED     +P DV +GHF V    GE+  R++VP+S LTHP F  LL+QA EE+GF+H+  LTI
Subjt:  VCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTI

Query:  PC
        PC
Subjt:  PC

AT2G28085.1 SAUR-like auxin-responsive protein family9.2e-2754.39Show/hide
Query:  KRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDG--EEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIP
        K+  GIVK K VVE+L +     +  S+      E+     VPKDVKEGHFAV+AVDG  E  +RFVVPL  L HPMF +LLEQA EEYGF H+GAL +P
Subjt:  KRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDG--EEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIP

Query:  CHPSEVEKILADQW
        C PS +  IL +QW
Subjt:  CHPSEVEKILADQW

AT2G46690.1 SAUR-like auxin-responsive protein family1.5e-1341.24Show/hide
Query:  EKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAV-VAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCHPSEVEKILA
        EK  KS  L RK              S   KDV +G  A+ V   GEE +RF+VP+    HP+F++LL++A +EYGFD +G +TIPCH  E   + A
Subjt:  EKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAV-VAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCHPSEVEKILA

AT3G09870.1 SAUR-like auxin-responsive protein family1.2e-2153.85Show/hide
Query:  KFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVD-TSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCHPSEV
        KFK+ + KLQ     TR    + N   F+E+ +  S +P DVKEGH AV+AV GE  KRFV+ L  L  P FLRLLEQA EE+GF   G LTIPC P EV
Subjt:  KFKVVVEKLQKSLSLTRKLSAMSN--GFDEDVD-TSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCHPSEV

Query:  EKIL
        +KIL
Subjt:  EKIL

AT4G34760.1 SAUR-like auxin-responsive protein family5.2e-1441.41Show/hide
Query:  KRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPC
        K+ + + +  ++ + L++  SL +K      G+DED     +P DV +GHF V    GE   R++VP+S LTHP F  LL++A EE+GFDH+  LTIPC
Subjt:  KRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGACCTAGAAGCGTCTGCACGAAGAGAAAGAATGGTATTGTGAAATTTAAGGTCGTAGTCGAGAAGCTGCAGAAGAGCCTATCGCTAACTCGAAAGTTGAGTGC
GATGAGCAACGGTTTTGACGAGGATGTCGACACGAGTGCGGTGCCGAAGGATGTGAAGGAAGGGCATTTCGCGGTGGTGGCGGTGGACGGGGAGGAGCCGAAGCGATTCG
TGGTTCCGTTGAGTTGTTTGACACACCCTATGTTTTTGAGGCTGTTGGAGCAAGCAGCTGAGGAGTATGGGTTTGATCATGAAGGTGCATTGACAATCCCTTGTCACCCA
AGTGAGGTTGAGAAGATTTTGGCTGATCAATGGCAATTGGAGTCTAAAACAGATTCTAGAGATGCAATTGCTTGGGGAACTTTTTGTAAAGCTATCATTCAAAGTTAT
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGACCTAGAAGCGTCTGCACGAAGAGAAAGAATGGTATTGTGAAATTTAAGGTCGTAGTCGAGAAGCTGCAGAAGAGCCTATCGCTAACTCGAAAGTTGAGTGC
GATGAGCAACGGTTTTGACGAGGATGTCGACACGAGTGCGGTGCCGAAGGATGTGAAGGAAGGGCATTTCGCGGTGGTGGCGGTGGACGGGGAGGAGCCGAAGCGATTCG
TGGTTCCGTTGAGTTGTTTGACACACCCTATGTTTTTGAGGCTGTTGGAGCAAGCAGCTGAGGAGTATGGGTTTGATCATGAAGGTGCATTGACAATCCCTTGTCACCCA
AGTGAGGTTGAGAAGATTTTGGCTGATCAATGGCAATTGGAGTCTAAAACAGATTCTAGAGATGCAATTGCTTGGGGAACTTTTTGTAAAGCTATCATTCAAAGTTAT
Protein sequenceShow/hide protein sequence
MARPRSVCTKRKNGIVKFKVVVEKLQKSLSLTRKLSAMSNGFDEDVDTSAVPKDVKEGHFAVVAVDGEEPKRFVVPLSCLTHPMFLRLLEQAAEEYGFDHEGALTIPCHP
SEVEKILADQWQLESKTDSRDAIAWGTFCKAIIQSY