; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013647 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013647
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold1457:151724..152593
RNA-Seq ExpressionMS013647
SyntenyMS013647
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147283.1 uncharacterized protein LOC101218484 [Cucumis sativus]8.5e-6588Show/hide
Query:  EVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKL
        +++R  KP N GLC LDSNPL ADVKLQGG+RTLT+ASSLPETAASVAIAATVVGAAAT LSRRN+ SEA E+PL TCEDCGGSGLCSECKGEGFVLKKL
Subjt:  EVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKL

Query:  SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
        SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSC+TCGGSGTLNS
Subjt:  SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS

XP_008463206.1 PREDICTED: uncharacterized protein LOC103501412 isoform X1 [Cucumis melo]1.3e-6587.01Show/hide
Query:  CSSCEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFV
        CSSCEV+R  KP N GLC L+S PL AD+KLQGG+RTLT+ASSLPETAASVAIAATVVGAAAT LSRRN+ SEA E+PL TCEDCGGSGLCSECKGEGFV
Subjt:  CSSCEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFV

Query:  LKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
        LKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSC+TCGGSGTL+S
Subjt:  LKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS

XP_022152827.1 uncharacterized protein LOC111020449 [Momordica charantia]1.7e-7398Show/hide
Query:  EVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKL
        ++IRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRN+ASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKL
Subjt:  EVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKL

Query:  SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
        SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
Subjt:  SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS

XP_022998903.1 uncharacterized protein LOC111493423 [Cucurbita maxima]3.8e-6586.93Show/hide
Query:  SSCEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVL
        SS ++IR PKPIN GL   DSNP+ AD+KLQGG+RTLT+ASSLPETAASVAIAATVVGAAAT LSRRN+ SEAEEIPLR CEDCGGSGLCSECKGEGFVL
Subjt:  SSCEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVL

Query:  KKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
        KKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSC+TCGG+GT NS
Subjt:  KKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS

XP_023522425.1 uncharacterized protein LOC111786358, partial [Cucurbita pepo subsp. pepo]8.5e-6587.42Show/hide
Query:  CEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKK
        CEVIR PKPIN GL   DSNP+ AD+KLQGG+RTL +ASSLPETAASVAIAATVVGAAAT LSRRN+ SEA+EIPLR CEDCGGSGLCSECKGEGFVLKK
Subjt:  CEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKK

Query:  LSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
        LSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSC+TCGG+GT NS
Subjt:  LSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS

TrEMBL top hitse value%identityAlignment
A0A0A0LVE3 Uncharacterized protein4.1e-6588Show/hide
Query:  EVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKL
        +++R  KP N GLC LDSNPL ADVKLQGG+RTLT+ASSLPETAASVAIAATVVGAAAT LSRRN+ SEA E+PL TCEDCGGSGLCSECKGEGFVLKKL
Subjt:  EVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKL

Query:  SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
        SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSC+TCGGSGTLNS
Subjt:  SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS

A0A1S3CJ25 uncharacterized protein LOC103501412 isoform X16.4e-6687.01Show/hide
Query:  CSSCEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFV
        CSSCEV+R  KP N GLC L+S PL AD+KLQGG+RTLT+ASSLPETAASVAIAATVVGAAAT LSRRN+ SEA E+PL TCEDCGGSGLCSECKGEGFV
Subjt:  CSSCEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFV

Query:  LKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
        LKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSC+TCGGSGTL+S
Subjt:  LKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS

A0A6J1DHB6 uncharacterized protein LOC1110204498.3e-7498Show/hide
Query:  EVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKL
        ++IRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRN+ASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKL
Subjt:  EVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKL

Query:  SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
        SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
Subjt:  SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS

A0A6J1G9T1 uncharacterized protein LOC1114521093.0e-6384.97Show/hide
Query:  SSCEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVL
        SS ++IR PK IN GL  LD+NP+ AD+KLQGG+RTL +ASSLPETAASVAIAATVVGAAAT LSRRN+ SEA+EIPLR CEDCGGSGLCSECKGEGFVL
Subjt:  SSCEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVL

Query:  KKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
        KKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSC+TCGG+GT NS
Subjt:  KKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS

A0A6J1KI37 uncharacterized protein LOC1114934231.8e-6586.93Show/hide
Query:  SSCEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVL
        SS ++IR PKPIN GL   DSNP+ AD+KLQGG+RTLT+ASSLPETAASVAIAATVVGAAAT LSRRN+ SEAEEIPLR CEDCGGSGLCSECKGEGFVL
Subjt:  SSCEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVL

Query:  KKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS
        KKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSC+TCGG+GT NS
Subjt:  KKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G45050.1 unknown protein2.6e-2769.47Show/hide
Query:  QGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRR-NRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTA
        Q  KR+ TV  +L ETA S+AIAATVVG AAT+L RR N+ASE  E  ++ CE C GSG+C ECKGEGFVLKKLSD NAE+ARLAAKNMATR+TA
Subjt:  QGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRR-NRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTA

AT3G45050.2 unknown protein3.5e-4071.67Show/hide
Query:  QGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRR-NRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKK
        Q  KR+ TV  +L ETA S+AIAATVVG AAT+L RR N+ASE  E  ++ CE C GSG+C ECKGEGFVLKKLSD NAE+ARLAAKNMATR+TA LPKK
Subjt:  QGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRR-NRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKK

Query:  WSYCSKCSSARSCTTCGGSG
        WSYC+KCSS RSC  CGGSG
Subjt:  WSYCSKCSSARSCTTCGGSG

AT3G45050.3 unknown protein3.5e-4071.67Show/hide
Query:  QGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRR-NRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKK
        Q  KR+ TV  +L ETA S+AIAATVVG AAT+L RR N+ASE  E  ++ CE C GSG+C ECKGEGFVLKKLSD NAE+ARLAAKNMATR+TA LPKK
Subjt:  QGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRR-NRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKK

Query:  WSYCSKCSSARSCTTCGGSG
        WSYC+KCSS RSC  CGGSG
Subjt:  WSYCSKCSSARSCTTCGGSG

AT3G45050.4 unknown protein3.5e-4071.67Show/hide
Query:  QGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRR-NRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKK
        Q  KR+ TV  +L ETA S+AIAATVVG AAT+L RR N+ASE  E  ++ CE C GSG+C ECKGEGFVLKKLSD NAE+ARLAAKNMATR+TA LPKK
Subjt:  QGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRR-NRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKK

Query:  WSYCSKCSSARSCTTCGGSG
        WSYC+KCSS RSC  CGGSG
Subjt:  WSYCSKCSSARSCTTCGGSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAGATTGCTCTTCATGTGAAGTAATTAGGGGTCCTAAGCCCATCAATCTTGGTCTCTGCTCTTTGGATTCGAATCCTCTTTTAGCTGATGTTAAACTACAAGGAGGAAA
AAGAACATTGACTGTAGCTTCTTCCCTACCCGAAACAGCAGCTTCTGTTGCCATTGCTGCTACAGTTGTAGGTGCCGCAGCCACCCTCCTTTCCAGAAGAAACAGAGCTT
CTGAGGCTGAGGAGATTCCTTTGAGAACATGTGAAGATTGTGGTGGTTCAGGCTTATGCTCTGAATGCAAAGGTGAAGGGTTCGTTCTTAAGAAACTGTCAGATGAAAAT
GCAGAGAGGGCGAGGCTGGCTGCAAAAAACATGGCGACTCGATTCACCGCAGCGCTTCCTAAAAAGTGGAGCTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTACTAC
TTGTGGTGGCAGTGGGACGTTGAACTCT
mRNA sequenceShow/hide mRNA sequence
CAAGATTGCTCTTCATGTGAAGTAATTAGGGGTCCTAAGCCCATCAATCTTGGTCTCTGCTCTTTGGATTCGAATCCTCTTTTAGCTGATGTTAAACTACAAGGAGGAAA
AAGAACATTGACTGTAGCTTCTTCCCTACCCGAAACAGCAGCTTCTGTTGCCATTGCTGCTACAGTTGTAGGTGCCGCAGCCACCCTCCTTTCCAGAAGAAACAGAGCTT
CTGAGGCTGAGGAGATTCCTTTGAGAACATGTGAAGATTGTGGTGGTTCAGGCTTATGCTCTGAATGCAAAGGTGAAGGGTTCGTTCTTAAGAAACTGTCAGATGAAAAT
GCAGAGAGGGCGAGGCTGGCTGCAAAAAACATGGCGACTCGATTCACCGCAGCGCTTCCTAAAAAGTGGAGCTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTACTAC
TTGTGGTGGCAGTGGGACGTTGAACTCT
Protein sequenceShow/hide protein sequence
QDCSSCEVIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAASVAIAATVVGAAATLLSRRNRASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKLSDEN
AERARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS