CuGenDBv2

Gene ID	MS013659
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Genome location	scaffold1419:5092..5598
RNA-Seq Expression	MS013659
Synteny	MS013659
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7029126.1 hypothetical protein SDJN02_10311, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-68

79.29

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Query:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLG
        MGIS SKRV+NSLSNSP+FDSACDSTFSHCL  TQHAY GVFPYQLC AA HLHRLLT VRPHPLI KWLPSPPTR QVDSALR + R D+DR D+ETLG
Subjt:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLG

Query:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS
        PIRFKRWA+ELFAEAV +NV +EV+FR+PVG AGIAG+GAVTR+GK+LVGT+VA YA GVA S+YL LS
Subjt:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS

XP_022145868.1 uncharacterized protein LOC111015217 [Momordica charantia]

2.5e-86

99.41

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Query:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP
        MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLC AAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP
Subjt:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP

Query:  IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE
        IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE
Subjt:  IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE

XP_022932745.1 uncharacterized protein LOC111439202 [Cucurbita moschata]

3.1e-68

79.29

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Query:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLG
        MGIS SKRV+NSLSNSP+FDSACDSTFSHCL  TQHAY GVFPYQLC AA HLHRLLT VRPHPLI KWLPSPPTR QVDSALR + R D+DR D+ETLG
Subjt:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLG

Query:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS
        PIRFKRWA+ELFAEAV +NV +EV+FR+PVG AGIAG+GAVTR+GK+LVGT+VA YA GVA S+YL LS
Subjt:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS

XP_023539875.1 uncharacterized protein LOC111800422 [Cucurbita pepo subsp. pepo]

2.3e-68

79.29

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Query:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLG
        MGIS SKRV+NSLSNSP+FDSACDSTFSHCL  TQHAY GVFPYQLC AA HLHRLLT VRPHPLI KWLPSPPTR QVDSALR + R D+DR D+ETLG
Subjt:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLG

Query:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS
        PIRFKRWAIELFAEAV +NV +EV+FR+PVG AGIAG+GAVTR+GK+LVGT++A YA GVA S+YL LS
Subjt:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS

XP_038878178.1 uncharacterized protein LOC120070324 [Benincasa hispida]

2.0e-67

78.57

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Query:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP
        MGIS SKRV+NSL+NS EFD AC+STFSHCL+ TQHAYDGVFPYQLC AA HLH L+T VRPHPLI  WLPSPPTRLQVDSALR + R DSDR+ ETLGP
Subjt:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP

Query:  IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS
        IRFK WAIELFAEAVA+NVG++V+ R+PVG AGIAG+GAVTR+GK++VGTVVA YA GVA SVYLSLS
Subjt:  IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVZ1 Uncharacterized protein

1.5e-65

76.79

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Query:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP
        MGIS SKRV+NSL+NS EFDSAC+STFSHCL+ TQHAY+GVFPYQLC AA HLH LLT V+PHPLI  WLPSPPTRLQVDSALR + R DSDR+DE LG 
Subjt:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP

Query:  IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS
        I F RWAIELFAEAV +NVG++V+ R+PVG AGIAG+GAVTR+GK++VGTVVA YA GVA SVYLSLS
Subjt:  IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS

A0A5D3D2N6 Uncharacterized protein

4.5e-65

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Query:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP
        MG+S SKRV+NSL+NSPEFDSAC+STFSHCL+ TQHAY+GVFPYQLC AA HLH LLT V+PHPLI  WLPSPPTRLQVDSALR + R DSD + ETLG 
Subjt:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP

Query:  IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS
        IRF+RWAIELFAEAV +NVG++V+ R+P+G AGIAG+GAVTR+GK++VG VVA YA GVA S+YLSLS
Subjt:  IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS

A0A6J1CX41 uncharacterized protein LOC111015217

1.2e-86

99.41

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Query:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP
        MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLC AAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP
Subjt:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGP

Query:  IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE
        IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE
Subjt:  IRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE

A0A6J1F2Z4 uncharacterized protein LOC111439202

1.5e-68

79.29

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Query:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLG
        MGIS SKRV+NSLSNSP+FDSACDSTFSHCL  TQHAY GVFPYQLC AA HLHRLLT VRPHPLI KWLPSPPTR QVDSALR + R D+DR D+ETLG
Subjt:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLG

Query:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS
        PIRFKRWA+ELFAEAV +NV +EV+FR+PVG AGIAG+GAVTR+GK+LVGT+VA YA GVA S+YL LS
Subjt:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS

A0A6J1I3X0 uncharacterized protein LOC111470752

2.8e-67

78.11

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Query:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLG
        MGIS SKRV+NSLSNSP+FDSACDSTFSHCL  TQHAY GVFPYQLC AA HLHRLLT VRPHPLI KWLPSPPTRLQVDSAL+ + R D+ R D+ETLG
Subjt:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDR-DDETLG

Query:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS
        PIRFK WAIELFAEAV +NV +EV+FR+PVG AGIAG+GAVTR+GK+LVG++VA YA GVA S+YL LS
Subjt:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G43540.1 unknown protein

1.9e-47

57.65

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Query:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRV-IKRADSDRDDETLG
        MGIS SKRV   LSNSPEFDSACDS +   LS  QHA+ GV PYQL  AAAH+HR L+A+R  PLI +WL SPP++ QVDSALRV + R  +  ++E LG
Subjt:  MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRV-IKRADSDRDDETLG

Query:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE
           FK+WA+E+FAEAV  N  + +  RIP+G  GI G+GAVTR+G+NL+G  +  YA GVA SV+LSL++
Subjt:  PIRFKRWAIELFAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE

Sequences

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CDS sequence

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ATGGGGATATCGCCCTCGAAACGAGTCCAAAATTCACTATCCAACTCGCCCGAGTTCGACTCAGCCTGCGACTCGACCTTCTCCCACTGCCTTTCCCAGACGCAGCACGC
ATACGACGGCGTTTTCCCCTACCAACTCTGCGACGCCGCCGCCCACCTCCACCGCCTCCTCACCGCCGTCCGGCCCCATCCTCTCATACTCAAGTGGCTCCCGTCTCCCC
CGACTCGCCTCCAGGTCGACTCGGCCCTCCGAGTCATCAAGCGCGCCGACTCGGACCGCGACGACGAAACCCTAGGCCCGATCCGCTTCAAGCGTTGGGCGATCGAACTG
TTTGCAGAGGCTGTGGCGGAGAACGTCGGAAGAGAGGTTCTGTTTCGAATCCCGGTCGGAGCCGCCGGAATCGCCGGACTCGGCGCCGTGACTCGGGCCGGGAAGAACCT
GGTTGGGACTGTGGTTGCAGCGTACGCGTTTGGTGTTGCGGCTTCCGTATACCTTAGCTTGTCTGAG

mRNA sequence

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Protein sequence

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MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCDAAAHLHRLLTAVRPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIEL
FAEAVAENVGREVLFRIPVGAAGIAGLGAVTRAGKNLVGTVVAAYAFGVAASVYLSLSE

MS013659 (gene) of Bitter gourd (TR) v1 genome