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MS013674 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013674
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein TIC 214
Genome locationscaffold263:118310..118408
RNA-Seq ExpressionMS013674
SyntenyMS013674
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALO22749.1 Ycf1 [Cucurbita pepo subsp. pepo]3.6e-0581.58Show/hide
Query:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
        MSQTIGISLVH NKYQINQRYQE     KKSF+ESIAI
Subjt:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
YP_009420853.1 Ycf1 [Citrullus colocynthis]3.6e-0581.58Show/hide
Query:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
        MSQTIGISLVH NKYQINQRYQE     KKSF+ESIAI
Subjt:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
YP_009738261.1 Ycf1 [Siraitia siamensis]3.6e-0581.58Show/hide
Query:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
        MSQTIGISLVH NKYQINQRYQE     KKSF+ESIAI
Subjt:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
YP_009752977.1 Ycf1 protein [Momordica sessilifolia]3.6e-0581.58Show/hide
Query:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
        MSQTIGISLVH NKYQINQRYQE     KKSF+ESIAI
Subjt:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
YP_009753666.1 Ycf1 protein [Trichosanthes wallichiana]3.6e-0581.58Show/hide
Query:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
        MSQTIGISLVH NKYQINQRYQE     KKSF+ESIAI
Subjt:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
TrEMBL top hitse value%identityAlignment
A0A515BLT2 Protein TIC 2141.7e-0581.58Show/hide
Query:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
        MSQTIGISLVH NKYQINQRYQE     KKSF+ESIAI
Subjt:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
A0A6H0ESM5 Protein TIC 2141.7e-0581.58Show/hide
Query:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
        MSQTIGISLVH NKYQINQRYQE     KKSF+ESIAI
Subjt:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
A0A6H0EWP9 Protein TIC 2141.7e-0581.58Show/hide
Query:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
        MSQTIGISLVH NKYQINQRYQE     KKSF+ESIAI
Subjt:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
A0A6M3RU58 Protein TIC 2141.7e-0581.58Show/hide
Query:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
        MSQTIGISLVH NKYQINQRYQE     KKSF+ESIAI
Subjt:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
A0A6M3S424 Protein TIC 2141.7e-0581.58Show/hide
Query:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
        MSQTIGISLVH NKYQINQRYQE     KKSF+ESIAI
Subjt:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
SwissProt top hitse value%identityAlignment
Q4VZL0 Protein TIC 2141.5e-0673.68Show/hide
Query:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
        MSQTIGISLV  NKYQ+NQRYQE     K+SF+ESIAI
Subjt:  MSQTIGISLVHNNKYQINQRYQE-----KKSFSESIAI
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAAACCATAGGTATTTCATTAGTTCATAACAATAAGTACCAAATTAATCAAAGATATCAAGAAAAGAAGAGTTTTTCTGAATCCATTGCAATA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAAACCATAGGTATTTCATTAGTTCATAACAATAAGTACCAAATTAATCAAAGATATCAAGAAAAGAAGAGTTTTTCTGAATCCATTGCAATA
Protein sequenceShow/hide protein sequence
MSQTIGISLVHNNKYQINQRYQEKKSFSESIAI