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MS013675 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013675
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFormin 2
Genome locationscaffold263:123927..124643
RNA-Seq ExpressionMS013675
SyntenyMS013675
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8581797.1 hypothetical protein XENTR_v10024946 [Xenopus tropicalis]1.8e-1336.92Show/hide
Query:  PAVGPCTGLAAIAIGPSAGLAAPPAGPSAGLAAPPAGP---SAAPPAGPSVGLAAPPAGP---STAPPAGPSVRLVAPPAGPSAGLAAPTVGLDAPPVGP
        P  GP   ++A  +GP +    P  GP+     PP GP    +APPAGP + ++APP+GP    +APPAGP + + APP+GP      PT  +  P +GP
Subjt:  PAVGPCTGLAAIAIGPSAGLAAPPAGPSAGLAAPPAGP---SAAPPAGPSVGLAAPPAGP---STAPPAGPSVRLVAPPAGPSAGLAAPTVGLDAPPVGP

Query:  SAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTGPSAGLATPPAGPSAGLATPTVG----------LDAPPVGPSAGLAAPPTGPSAGLAAPPAGPSAGLAA
           +  P +GP   ++APP GP + ++APP GP   ++ PPAGP   ++ P +G          + APP GP   ++APP GP +    PP+GP +    
Subjt:  SAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTGPSAGLATPPAGPSAGLATPTVG----------LDAPPVGPSAGLAAPPTGPSAGLAAPPAGPSAGLAA

Query:  PPAGPSTGLAAPPAGPSAGLAAPPVRLAAPVTGPSTGL--------AAPPVRLAAPVTGP
        PPAGP T    PPAGP      PP     P   P +            PP+ L+AP  GP
Subjt:  PPAGPSTGLAAPPAGPSAGLAAPPVRLAAPVTGPSTGL--------AAPPVRLAAPVTGP

KPJ09996.1 CCR4-NOT transcription complex subunit 1 [Papilio machaon]7.3e-1554.01Show/hide
Query:  PAGPSAGLAAPTVGLDAPPVGPSAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTG---PSAGLATPPAG---PSAGLATPTVGLDAPPVG---PSAGLAAP
        PA  SA   A     ++PPVGP     APP  P AGLA PP     GLA PP G   P AGLA PPAG   P AGLA P  GL  PP G   P AGLA P
Subjt:  PAGPSAGLAAPTVGLDAPPVGPSAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTG---PSAGLATPPAG---PSAGLATPTVGLDAPPVG---PSAGLAAP

Query:  PTG---PSAGLAAPPAG---PSAGLAAPPAG---PSTGLAAPPAG---PSAGLAAPPVRLAAPVTG---PSTGLAAPPVRLAAPVTG
        P G   P AGLA PPAG   P AGLA PPAG   P  GLA PPAG   P AGLA PP  LA P  G   P  GLA PP  LA P  G
Subjt:  PTG---PSAGLAAPPAG---PSAGLAAPPAG---PSTGLAAPPAG---PSAGLAAPPVRLAAPVTG---PSTGLAAPPVRLAAPVTG

KZM27847.1 hypothetical protein ST47_g1004 [Ascochyta rabiei]1.1e-1551.57Show/hide
Query:  PSAGLAAPPAGPSAGLAAPPAGPSAAPPAGPSVGLAAPPAGPSTAPPAGPSVRLVAPPAGPSAGLAAPTVGLDAPPVGPSAGLAAPPVGPSAGLAAPPTG
        P +   APPAGPSA  A PPAGP AAPPA P  G +APPA P  APPA P     APPAGPS           APP GPSA  AAPP       AAPP G
Subjt:  PSAGLAAPPAGPSAGLAAPPAGPSAAPPAGPSVGLAAPPAGPSTAPPAGPSVRLVAPPAGPSAGLAAPTVGLDAPPVGPSAGLAAPPVGPSAGLAAPPTG

Query:  PSVGLAAPPTGPSAGLATPPAGPSAGLATPTVGLDAPPVGPSAGLAAPPTG-PSAGLAAPPAGPSAGLAAPPAGPSTGLAAPPAGPSAGLAAPPVRLAAP
        PS   AAPP  P    A PPA P A          APP GPSA  AAPP   P+A  AAPPAGPSA  AAPPA P    AAPPAG SA   + P    +P
Subjt:  PSVGLAAPPTGPSAGLATPPAGPSAGLATPTVGLDAPPVGPSAGLAAPPTG-PSAGLAAPPAGPSAGLAAPPAGPSTGLAAPPAGPSAGLAAPPVRLAAP

Query:  VTGPSTGLAA--PPVRLAAPVTG
             TG AA   PV L A   G
Subjt:  VTGPSTGLAA--PPVRLAAPVTG

XP_014365248.1 PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like, partial [Papilio machaon]7.3e-1554.01Show/hide
Query:  PAGPSAGLAAPTVGLDAPPVGPSAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTG---PSAGLATPPAG---PSAGLATPTVGLDAPPVG---PSAGLAAP
        PA  SA   A     ++PPVGP     APP  P AGLA PP     GLA PP G   P AGLA PPAG   P AGLA P  GL  PP G   P AGLA P
Subjt:  PAGPSAGLAAPTVGLDAPPVGPSAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTG---PSAGLATPPAG---PSAGLATPTVGLDAPPVG---PSAGLAAP

Query:  PTG---PSAGLAAPPAG---PSAGLAAPPAG---PSTGLAAPPAG---PSAGLAAPPVRLAAPVTG---PSTGLAAPPVRLAAPVTG
        P G   P AGLA PPAG   P AGLA PPAG   P  GLA PPAG   P AGLA PP  LA P  G   P  GLA PP  LA P  G
Subjt:  PTG---PSAGLAAPPAG---PSAGLAAPPAG---PSTGLAAPPAG---PSAGLAAPPVRLAAPVTG---PSTGLAAPPVRLAAPVTG

XP_038799198.1 uncharacterized protein EKO05_003865 [Ascochyta rabiei]3.0e-2155.19Show/hide
Query:  PSAGLAAPPAGPSAGLAAPPAGPSAAPPAGPSVGLAAPPAGPSTAPPAGPSVRLVAPPAGPSAGLAAPTVGLDAPPVGPSAGLAAPPVGPSAGLAAPPTG
        P +   APPAGPSA  A PPAGP A PPA P    AAPPA P  APPA P     APPAGP AG          PP GP AG   PP GP AG +APP G
Subjt:  PSAGLAAPPAGPSAGLAAPPAGPSAAPPAGPSVGLAAPPAGPSTAPPAGPSVRLVAPPAGPSAGLAAPTVGLDAPPVGPSAGLAAPPVGPSAGLAAPPTG

Query:  PSVGLAAPPTGPSAGLATPPAGPSAGLATPTVGLDAPPVGPSAGLAAPPTGPSAGLAAPPAG-PSAGLAAPPAGPSTGLAAPPAGPSAGLAAPPVRLAAP
        PS   AAPP  P AG + PPA P A  A P     APP  P    AAPP GPSA  AAPPA  P+A  AAPPAGPS   AAPPAGPSA  AAPP   AAP
Subjt:  PSVGLAAPPTGPSAGLATPPAGPSAGLATPTVGLDAPPVGPSAGLAAPPTGPSAGLAAPPAG-PSAGLAAPPAGPSTGLAAPPAGPSAGLAAPPVRLAAP

Query:  VTGPSTGLAAPP
          G S    + P
Subjt:  VTGPSTGLAAPP

TrEMBL top hitse value%identityAlignment
A0A163LJI0 Uncharacterized protein5.4e-1651.57Show/hide
Query:  PSAGLAAPPAGPSAGLAAPPAGPSAAPPAGPSVGLAAPPAGPSTAPPAGPSVRLVAPPAGPSAGLAAPTVGLDAPPVGPSAGLAAPPVGPSAGLAAPPTG
        P +   APPAGPSA  A PPAGP AAPPA P  G +APPA P  APPA P     APPAGPS           APP GPSA  AAPP       AAPP G
Subjt:  PSAGLAAPPAGPSAGLAAPPAGPSAAPPAGPSVGLAAPPAGPSTAPPAGPSVRLVAPPAGPSAGLAAPTVGLDAPPVGPSAGLAAPPVGPSAGLAAPPTG

Query:  PSVGLAAPPTGPSAGLATPPAGPSAGLATPTVGLDAPPVGPSAGLAAPPTG-PSAGLAAPPAGPSAGLAAPPAGPSTGLAAPPAGPSAGLAAPPVRLAAP
        PS   AAPP  P    A PPA P A          APP GPSA  AAPP   P+A  AAPPAGPSA  AAPPA P    AAPPAG SA   + P    +P
Subjt:  PSVGLAAPPTGPSAGLATPPAGPSAGLATPTVGLDAPPVGPSAGLAAPPTG-PSAGLAAPPAGPSAGLAAPPAGPSTGLAAPPAGPSAGLAAPPVRLAAP

Query:  VTGPSTGLAA--PPVRLAAPVTG
             TG AA   PV L A   G
Subjt:  VTGPSTGLAA--PPVRLAAPVTG

A0A167VCE2 CFEM domain-containing protein1.2e-1038.31Show/hide
Query:  PAVGPCTGLAAIAIGPSAGLAAPPAGPSAGLAAPPAGPSAAP---PAGPSVGLAAPPAGPSTAPPAGPSVRLVAPPAGPSAGLAAPTVGLDAPPVGP---
        P+VGP +G +A + GPS+  + P + PS+  + P + PS+ P   P+GPS  ++AP +GPS+AP    S     P + PS   +AP+ G  + P GP   
Subjt:  PAVGPCTGLAAIAIGPSAGLAAPPAGPSAGLAAPPAGPSAAP---PAGPSVGLAAPPAGPSTAPPAGPSVRLVAPPAGPSAGLAAPTVGLDAPPVGP---

Query:  --SAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTGPSAGLATPPAGP-SAGLATPTVGLDAPPVGPSAGLAAPPTGPSAGLAAPPAGPSAGLAAPPAGPST
          SA   +P VGP +G +AP +GPS   + P + PS G A+ P+GP SA  + P+  + AP  GPS   +AP +GPS  ++AP +GPS+  + P + PS+
Subjt:  --SAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTGPSAGLATPPAGP-SAGLATPTVGLDAPPVGPSAGLAAPPTGPSAGLAAPPAGPSAGLAAPPAGPST

Query:  GLAAPPAGPSAGLAAPPVRLAAPVTGPSTGLAAPPVRLAAPVTGPSTG
        G ++ P+GPS   +AP V   +P  GP +G + P    + P + PS+G
Subjt:  GLAAPPAGPSAGLAAPPVRLAAPVTGPSTGLAAPPVRLAAPVTGPSTG

A0A3Q3F8A4 Uncharacterized protein1.2e-1050.4Show/hide
Query:  PAVGPCTGLA-AIAIGPSAGLAAPPA-GPSAGLAAPPA-GPSAAPPAGPSVGLAAPPAGPSTAPPAGPSV-RLVAPPAGPSAGLAAPTVG-LDAPPVGPS
        PAVGP  G A   A GPS G A  PA GPS G A  PA GPS  P  GP+VG   P  GP+  P  GPSV   V P  GPS G   P VG  + P VGP+
Subjt:  PAVGPCTGLA-AIAIGPSAGLAAPPA-GPSAGLAAPPA-GPSAAPPAGPSVGLAAPPAGPSTAPPAGPSV-RLVAPPAGPSAGLAAPTVG-LDAPPVGPS

Query:  AGLAAPPVGPSAGLA-APPTGPSVGLA-APPTGPSAGLATPPA-GPSAGLATPTVGLDAPPVGPSAGLA-APPTGPSAGLAAPPA-GPSAGLAAPPA-GP
         G   P VGPS G A  P  GPSVG A  P  GPS G A  PA GPS G   P VG   P VGPS G A  P  GPS G A  PA GPS G A  PA GP
Subjt:  AGLAAPPVGPSAGLA-APPTGPSVGLA-APPTGPSAGLATPPA-GPSAGLATPTVGLDAPPVGPSAGLA-APPTGPSAGLAAPPA-GPSAGLAAPPA-GP

Query:  STGLAAPPA-GPSAGLAAPPVR-LAAPVTGPSTGLAAPPVRLAAPVTGPSTG
        S G A  PA GPS G A  P    + P  GP+ G A  P     P  GPS G
Subjt:  STGLAAPPA-GPSAGLAAPPVR-LAAPVTGPSTGLAAPPVRLAAPVTGPSTG

A0A4W3H3E1 Uncharacterized protein3.2e-1645.24Show/hide
Query:  PCTGLAAIAIGPSAGLAAPPAGPSAGLAAPPAGPS---AAPPAGPSVGLAAPPAGPS---TAPPAGPSVRLVAPPAGPSAGLAA----PTVGLDAPPVGP
        P T L A    PS  L A PA PS  L A PA PS    A PA PS  L A PA PS   TA PA PS  L A PA PS  L A    P+  L A P  P
Subjt:  PCTGLAAIAIGPSAGLAAPPAGPSAGLAAPPAGPS---AAPPAGPSVGLAAPPAGPS---TAPPAGPSVRLVAPPAGPSAGLAA----PTVGLDAPPVGP

Query:  SAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTGPSAGLATPPAGPSAGL----ATPTVGLDAPPVGPSAGLAAPPTGPSAGLAAPPAGPSAGLAAPPAGPS
        S  L A P  PS  L A P  PS  L A P  PS  L   PA PS  L    A P+  L A P  PS  L A P  PS  L A PA PS  L A PA PS
Subjt:  SAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTGPSAGLATPPAGPSAGL----ATPTVGLDAPPVGPSAGLAAPPTGPSAGLAAPPAGPSAGLAAPPAGPS

Query:  TGLAAPPAGPSAGLAAPPVRLAAPVT----GPSTGLAAPPVRLAAPVTGPST
        T L A PA PS  L A P   + P+T     PST L A P   + P+T  ++
Subjt:  TGLAAPPAGPSAGLAAPPVRLAAPVT----GPSTGLAAPPVRLAAPVTGPST

A0A6V7VVA1 Hypothetical protein6.9e-1139.6Show/hide
Query:  GPCTGLAAIAIGPSAGLAAPPAGPSAGLAAPPAGPSAAPP---AGPSVGLAAPPAGPSTAPP---AGPSVRLVAPPAGPSAG----LAAPTVGLDAPPVG
        GP TG  +   GPS G  +  AGPS G  +  A PS   P   AGPS G  +  AGPST  P   AGPS    +  AGPS G     A P+ G  +   G
Subjt:  GPCTGLAAIAIGPSAGLAAPPAGPSAGLAAPPAGPSAAPP---AGPSVGLAAPPAGPSTAPP---AGPSVRLVAPPAGPSAG----LAAPTVGLDAPPVG

Query:  PSAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTGPSAGLATPPAGPSAGL----ATPTVGLDAPPVGPSAGLAAPPTGPSAGLAAPPAGPSAGLAAPPAGP
        PS G  +   GPS G  +   GPS G  +   GPS G  +  AG S G     A P+ G  +   GPS G  +   GPS G  +  AGPS G  +  AGP
Subjt:  PSAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTGPSAGLATPPAGPSAGL----ATPTVGLDAPPVGPSAGLAAPPTGPSAGLAAPPAGPSAGLAAPPAGP

Query:  STGLAAPPAGPSAGLAAPPVRLAAPVTGPSTGLAAPPVRLAAPVTGPSTG
        STG  +  AGPS G    P   A P TG  +  A P     +   GPSTG
Subjt:  STGLAAPPAGPSAGLAAPPVRLAAPVTGPSTGLAAPPVRLAAPVTGPSTG

SwissProt top hitse value%identityAlignment
P19835 Bile salt-activated lipase4.1e-0539.88Show/hide
Query:  LAAPTV----GLDAPPVGPSAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTGPSAGLATPPAGPSAGLATPTVG-LDAPPVGPSAGLAAPPTGPSAGLAAP
        LA PTV        PP G S     PP G S     PPTG S     PPTG S     PP G S     P  G   APPV P+    APP  P+    AP
Subjt:  LAAPTV----GLDAPPVGPSAGLAAPPVGPSAGLAAPPTGPSVGLAAPPTGPSAGLATPPAGPSAGLATPTVG-LDAPPVGPSAGLAAPPTGPSAGLAAP

Query:  PAGPSAGLAAPPAGPSTGLAAPPAGPSAGLAAPPVRLAAPVTGPSTGLAAPPVRLAAPVTGPS
        P  P+    APP  P+    APP  P+     PPV    P TG S    APPV    P TG S
Subjt:  PAGPSAGLAAPPAGPSTGLAAPPAGPSAGLAAPPVRLAAPVTGPSTGLAAPPVRLAAPVTGPS

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTGCGGTAGGGCCCTGCACCGGACTTGCTGCTATTGCGATCGGACCCTCAGCCGGACTGGCTGCTCCTCCAGCTGGACCCTCAGCCGGACTTGCTGCTCCTCCAGCTGG
ACCCTCAGCTGCTCCTCCAGCTGGACCCTCAGTCGGACTGGCTGCTCCTCCAGCTGGACCCTCAACTGCTCCTCCAGCTGGACCCTCAGTCAGACTTGTTGCTCCTCCAG
CTGGACCCTCAGCCGGACTGGCTGCTCCTACAGTCGGACTTGATGCTCCTCCAGTTGGACCCTCAGCCGGACTGGCTGCTCCTCCAGTTGGACCCTCAGCCGGACTGGCT
GCTCCTCCAACTGGACCCTCAGTCGGACTGGCTGCTCCTCCAACTGGACCCTCAGCCGGACTGGCTACTCCTCCAGCTGGACCTTCAGCCGGACTGGCTACTCCTACAGT
CGGACTTGATGCTCCTCCAGTTGGACCCTCAGCCGGACTGGCTGCTCCTCCAACTGGACCCTCAGCCGGACTGGCTGCTCCTCCAGCTGGACCCTCAGCCGGACTTGCTG
CTCCTCCAGCTGGACCCTCAACCGGACTTGCTGCTCCTCCAGCGGGACCCTCAGCCGGACTTGCTGCTCCTCCAGTCAGACTGGCTGCTCCTGTGACAGGACCCTCCACC
GGACTTGCTGCTCCTCCAGTCAGACTGGCTGCTCCTGTGACAGGACCCTCCACCGGA
mRNA sequenceShow/hide mRNA sequence
CCTGCGGTAGGGCCCTGCACCGGACTTGCTGCTATTGCGATCGGACCCTCAGCCGGACTGGCTGCTCCTCCAGCTGGACCCTCAGCCGGACTTGCTGCTCCTCCAGCTGG
ACCCTCAGCTGCTCCTCCAGCTGGACCCTCAGTCGGACTGGCTGCTCCTCCAGCTGGACCCTCAACTGCTCCTCCAGCTGGACCCTCAGTCAGACTTGTTGCTCCTCCAG
CTGGACCCTCAGCCGGACTGGCTGCTCCTACAGTCGGACTTGATGCTCCTCCAGTTGGACCCTCAGCCGGACTGGCTGCTCCTCCAGTTGGACCCTCAGCCGGACTGGCT
GCTCCTCCAACTGGACCCTCAGTCGGACTGGCTGCTCCTCCAACTGGACCCTCAGCCGGACTGGCTACTCCTCCAGCTGGACCTTCAGCCGGACTGGCTACTCCTACAGT
CGGACTTGATGCTCCTCCAGTTGGACCCTCAGCCGGACTGGCTGCTCCTCCAACTGGACCCTCAGCCGGACTGGCTGCTCCTCCAGCTGGACCCTCAGCCGGACTTGCTG
CTCCTCCAGCTGGACCCTCAACCGGACTTGCTGCTCCTCCAGCGGGACCCTCAGCCGGACTTGCTGCTCCTCCAGTCAGACTGGCTGCTCCTGTGACAGGACCCTCCACC
GGACTTGCTGCTCCTCCAGTCAGACTGGCTGCTCCTGTGACAGGACCCTCCACCGGA
Protein sequenceShow/hide protein sequence
PAVGPCTGLAAIAIGPSAGLAAPPAGPSAGLAAPPAGPSAAPPAGPSVGLAAPPAGPSTAPPAGPSVRLVAPPAGPSAGLAAPTVGLDAPPVGPSAGLAAPPVGPSAGLA
APPTGPSVGLAAPPTGPSAGLATPPAGPSAGLATPTVGLDAPPVGPSAGLAAPPTGPSAGLAAPPAGPSAGLAAPPAGPSTGLAAPPAGPSAGLAAPPVRLAAPVTGPST
GLAAPPVRLAAPVTGPSTG