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MS013684 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013684
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function, DUF538
Genome locationscaffold263:161359..161793
RNA-Seq ExpressionMS013684
SyntenyMS013684
Gene Ontology termsNA
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155180.1 uncharacterized protein At5g01610-like [Momordica charantia]6.5e-75100Show/hide
Query:  MASLFLLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKV
        MASLFLLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKV
Subjt:  MASLFLLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKV

Query:  LLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        LLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
Subjt:  LLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

XP_022953728.1 uncharacterized protein LOC111456173 [Cucurbita moschata]1.6e-5779.14Show/hide
Query:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN
        LL  AFVSFS+PLVSAQKALTAYDI+QQYGFPVGILP+GVTGY+LDR TG FSL+L+QKC+F+I+SY LEYKPT+ GVISQG++  LKGV+VK+L+LWL+
Subjt:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN

Query:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        IVEVV+DG +L FSVGIASANFPID FYESPQCGCGFDC
Subjt:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

XP_022991260.1 uncharacterized protein At5g01610-like [Cucurbita maxima]1.9e-5881.29Show/hide
Query:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN
        LL  AFVSFS+PLVSAQKALTAYDI+QQYGFPVGILP+GVTGYELDR TG FSL+L+QKC+F+I+SY LEYKPTI GVISQGR+  LKGV+VK+L+LWL+
Subjt:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN

Query:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        IVEVV+DG +L FSVGIASANFPID FYESPQCGCGFDC
Subjt:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

XP_023549402.1 uncharacterized protein LOC111807766 [Cucurbita pepo subsp. pepo]4.6e-5778.42Show/hide
Query:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN
        LL  AFVSFS+PLVSAQKALTAYDI+QQYGFPVGILP+GVTGY+LDR TG FSL+L+QKC+F+I+SY LEYKPT+ GVISQG++  LKGV+VK+L+LW +
Subjt:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN

Query:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        IVEVV+DG +L FSVGIASANFPID FYESPQCGCGFDC
Subjt:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

XP_038898643.1 uncharacterized protein LOC120086187 [Benincasa hispida]2.8e-6284.14Show/hide
Query:  MASLFLLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKV
        MASL LLLL AFVSFS+PLVSAQK LTAYDILQQYGFPVGILPVGV GYEL+R TGEFSL+LNQKC+F IESY LEYK T++GVISQGRIR LKGV+VK+
Subjt:  MASLFLLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKV

Query:  LLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        +LLWL+IVEVVNDG DLQFSVGIASANFP+D FYESP+CGCGFDC
Subjt:  LLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

TrEMBL top hitse value%identityAlignment
A0A1S3BSV3 uncharacterized protein LOC1034928011.5e-5677.7Show/hide
Query:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN
        LLL A +S S  L+S  K LTAYDILQQYGFPVGILP+G TGYEL+R TGEFSLYLNQ+C+F I+SY LEYK T++GVISQGRIR LKGV+VK++LLWL+
Subjt:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN

Query:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        IVEVVNDG DLQFSVGIASANFP+D FYESP+CGCGFDC
Subjt:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

A0A6J1DLP9 uncharacterized protein At5g01610-like3.1e-75100Show/hide
Query:  MASLFLLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKV
        MASLFLLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKV
Subjt:  MASLFLLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKV

Query:  LLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        LLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
Subjt:  LLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

A0A6J1GP52 uncharacterized protein LOC1114561737.7e-5879.14Show/hide
Query:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN
        LL  AFVSFS+PLVSAQKALTAYDI+QQYGFPVGILP+GVTGY+LDR TG FSL+L+QKC+F+I+SY LEYKPT+ GVISQG++  LKGV+VK+L+LWL+
Subjt:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN

Query:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        IVEVV+DG +L FSVGIASANFPID FYESPQCGCGFDC
Subjt:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

A0A6J1H965 uncharacterized protein At5g01610-like8.0e-5575.54Show/hide
Query:  LLFAFVSFSN-PLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN
        LL AF+S S+ PL  AQK+L+AYDILQQYGFPVGILPVGVTGYE ++ TGEFSL+LN+KCRF I+SY LEYKPT+KGVISQG I+NLKGV+VK+LL+W N
Subjt:  LLFAFVSFSN-PLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN

Query:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        IVEVV+D  +L+FS+G+ASANFPI+ FYESPQCGCGFDC
Subjt:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

A0A6J1JSE0 uncharacterized protein At5g01610-like9.1e-5981.29Show/hide
Query:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN
        LL  AFVSFS+PLVSAQKALTAYDI+QQYGFPVGILP+GVTGYELDR TG FSL+L+QKC+F+I+SY LEYKPTI GVISQGR+  LKGV+VK+L+LWL+
Subjt:  LLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLN

Query:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        IVEVV+DG +L FSVGIASANFPID FYESPQCGCGFDC
Subjt:  IVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02813.1 Protein of unknown function, DUF5381.0e-3350.7Show/hide
Query:  LFLLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLL
        +FLLLL   VS     VS QK  + Y +L+ Y  P GILP GV  Y+L+R TG F +  N  C+FSI+SY ++YKP I G+I++GR+  L GV+VKVL  
Subjt:  LFLLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLL

Query:  WLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        W+NI EV  DG D++F VG AS  F    F +SP+CGCGF+C
Subjt:  WLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

AT1G02816.1 Protein of unknown function, DUF5382.9e-4157.82Show/hide
Query:  SLFLLLLFAFVSFSNPLVSA---QKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIE-SYALEYKPTIKGVISQGRIRNLKGVTV
        S+F   LF   S   PL++A       TAY +LQ Y FPVGILP GV  Y+LD+ TG+F  Y N+ C F+++ SY L+YK TI G IS+ +I  L GV V
Subjt:  SLFLLLLFAFVSFSNPLVSA---QKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIE-SYALEYKPTIKGVISQGRIRNLKGVTV

Query:  KVLLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        KVL LWLNIVEV+ +G +L+FSVGI SANF ID FYESPQCGCGFDC
Subjt:  KVLLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

AT4G02360.1 Protein of unknown function, DUF5382.5e-4060Show/hide
Query:  LLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWL
        +  LF  VSF+   VS QK  TAYD ++ Y  P GILP GV  YEL+  TG F +Y N  C F+I+SY L+YK TI GVIS G ++NLKGV+VKVL  W+
Subjt:  LLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWL

Query:  NIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC
        NI EV  DG DL FSVGIASA+FP   F ESPQCGCGFDC
Subjt:  NIVEVVNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC

AT4G02370.1 Protein of unknown function, DUF5385.2e-3860Show/hide
Query:  TAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFS-IESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLNIVEVVNDGYDLQFSVGIAS
        TAY +LQ Y FPVGILP GV  Y+LD  TG+F  Y N  C F+ + SY L YK TI G IS+ +++ L GV VKVL LWLNIVEV+ +G +++FSVGI S
Subjt:  TAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFS-IESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLNIVEVVNDGYDLQFSVGIAS

Query:  ANFPIDGFYESPQCGCGFDC
        ANF I  F ESPQCGCGF+C
Subjt:  ANFPIDGFYESPQCGCGFDC

AT5G19590.1 Protein of unknown function, DUF5382.3e-1734.75Show/hide
Query:  SLFLL--LLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSI--ESYALEYKPTIKGVISQGRIRNLKGVTV
        SLFLL  L+   +S  +P    +K   A+  L  +GFP+G+LP+ V  Y L++ +G+FSL+LN  C+ ++  ++Y   Y   + G ISQG+I  L+G+ V
Subjt:  SLFLL--LLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSI--ESYALEYKPTIKGVISQGRIRNLKGVTV

Query:  KVLLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQC
        +      +I  + + G +L F V   +A +P   F ES  C
Subjt:  KVLLLWLNIVEVVNDGYDLQFSVGIASANFPIDGFYESPQC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTTTTTCTTCTTCTTCTTTTCGCTTTCGTTTCCTTCTCAAACCCTCTCGTCTCTGCTCAGAAAGCTCTCACCGCCTACGATATTCTTCAGCAGTACGGCTT
CCCCGTCGGAATTCTTCCCGTCGGAGTAACTGGCTACGAATTGGACAGGGTTACCGGAGAATTCAGTCTCTACTTGAATCAGAAGTGCCGATTCTCGATCGAATCCTACG
CATTGGAGTACAAGCCTACCATTAAGGGCGTGATTTCCCAAGGCAGAATCAGGAACTTGAAAGGTGTTACGGTTAAGGTGCTGTTGCTGTGGCTCAACATCGTGGAGGTC
GTTAACGATGGCTATGATCTCCAGTTCTCTGTGGGAATCGCCTCCGCCAACTTTCCGATTGATGGTTTCTATGAGTCGCCGCAGTGTGGCTGTGGATTTGACTGC
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCTTTTTCTTCTTCTTCTTTTCGCTTTCGTTTCCTTCTCAAACCCTCTCGTCTCTGCTCAGAAAGCTCTCACCGCCTACGATATTCTTCAGCAGTACGGCTT
CCCCGTCGGAATTCTTCCCGTCGGAGTAACTGGCTACGAATTGGACAGGGTTACCGGAGAATTCAGTCTCTACTTGAATCAGAAGTGCCGATTCTCGATCGAATCCTACG
CATTGGAGTACAAGCCTACCATTAAGGGCGTGATTTCCCAAGGCAGAATCAGGAACTTGAAAGGTGTTACGGTTAAGGTGCTGTTGCTGTGGCTCAACATCGTGGAGGTC
GTTAACGATGGCTATGATCTCCAGTTCTCTGTGGGAATCGCCTCCGCCAACTTTCCGATTGATGGTTTCTATGAGTCGCCGCAGTGTGGCTGTGGATTTGACTGC
Protein sequenceShow/hide protein sequence
MASLFLLLLFAFVSFSNPLVSAQKALTAYDILQQYGFPVGILPVGVTGYELDRVTGEFSLYLNQKCRFSIESYALEYKPTIKGVISQGRIRNLKGVTVKVLLLWLNIVEV
VNDGYDLQFSVGIASANFPIDGFYESPQCGCGFDC