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MS013686 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013686
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionindole-3-acetic acid-induced protein ARG2
Genome locationscaffold263:170331..170721
RNA-Seq ExpressionMS013686
SyntenyMS013686
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144227.1 indole-3-acetic acid-induced protein ARG2 [Momordica charantia]3.4e-4098.96Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNKN
        MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGED+VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNKN
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNKN

XP_022960392.1 indole-3-acetic acid-induced protein ARG2-like [Cucurbita moschata]3.8e-3180.58Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLK
        MARS S+VKVLSALV+DGFSSALSRRGYAAASQGV+SSA K   V      N+LKKSGE+K VGSSEKV+WVPDP TGYYRPENR DEIDVAELRSILLK
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLK

Query:  NKN
        NKN
Subjt:  NKN

XP_022991270.1 indole-3-acetic acid-induced protein ARG2-like [Cucurbita maxima]5.5e-3079.05Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAA--ASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSIL
        MARS S+VKVLSA+VADGFSSALSRRGYAA  ASQGV+SSA K   V      NLLKKSGE+K VGSSEKVSWVPDPVTGYYRPENR DEIDVAELRS+L
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAA--ASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSIL

Query:  LKNKN
        L N+N
Subjt:  LKNKN

XP_023513499.1 indole-3-acetic acid-induced protein ARG2-like [Cucurbita pepo subsp. pepo]3.8e-3180.58Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLK
        MARS S+VKVLSALV+DGFSSALSRRGYAAASQGV+SSA K   V      N+LKKSGE+K VGSSEKV+WVPDP TGYYRPENR DEIDVAELRSILLK
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLK

Query:  NKN
        NKN
Subjt:  NKN

XP_023548996.1 indole-3-acetic acid-induced protein ARG2 [Cucurbita pepo subsp. pepo]3.2e-3080Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAA--ASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSIL
        MARS S+VKVLSALVADGFSSALSRRGYAA  ASQGV+SSA K   V      NLLKKSGE+K VGSSEKVSWVPDPVTGYYRPENR DEIDVAELRS+L
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAA--ASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSIL

Query:  LKNKN
        L N+N
Subjt:  LKNKN

TrEMBL top hitse value%identityAlignment
A0A5D3D3A4 Indole-3-acetic acid-induced protein ARG2-like7.7e-3078.1Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAA--SQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSIL
        MARS S+VK+LSA+V+DGFSS L+ RGYAAA  SQGV+SSA K AGV      NLLKKSGE+K VGS+EKVSWVPDPVTGYYRPENR DEIDVAELRSIL
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAA--SQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSIL

Query:  LKNKN
        LKNKN
Subjt:  LKNKN

A0A6J1CT29 indole-3-acetic acid-induced protein ARG21.7e-4098.96Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNKN
        MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGED+VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNKN
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNKN

A0A6J1H796 indole-3-acetic acid-induced protein ARG2-like1.8e-3180.58Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLK
        MARS S+VKVLSALV+DGFSSALSRRGYAAASQGV+SSA K   V      N+LKKSGE+K VGSSEKV+WVPDP TGYYRPENR DEIDVAELRSILLK
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLK

Query:  NKN
        NKN
Subjt:  NKN

A0A6J1JSE9 indole-3-acetic acid-induced protein ARG2-like2.6e-3079.05Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAA--ASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSIL
        MARS S+VKVLSA+VADGFSSALSRRGYAA  ASQGV+SSA K   V      NLLKKSGE+K VGSSEKVSWVPDPVTGYYRPENR DEIDVAELRS+L
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAA--ASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSIL

Query:  LKNKN
        L N+N
Subjt:  LKNKN

A0A6J1KR71 indole-3-acetic acid-induced protein ARG2-like1.8e-3180.58Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLK
        MARS S+VKVLSALV+DGFSSALSRRGYAAASQGV+SSA K   V      N+LKKSGE+K VGSSEKV+WVPDP TGYYRPENR DEIDVAELRSILLK
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGV------NLLKKSGEDK-VGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLK

Query:  NKN
        NKN
Subjt:  NKN

SwissProt top hitse value%identityAlignment
P32292 Indole-3-acetic acid-induced protein ARG21.7e-2160.82Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAA--GVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK
        MARS ++VKVLSALVADGFS+  +R G+AAA+    S+    A  G N++ KSGE+KV   EKVSWVPDPVTGYYRPEN T+EIDVA++R+ +L  K
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAA--GVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK

P46522 Late embryogenesis abundant protein Lea5-D5.3e-1244.55Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAA-SQGVSSSAAKAAGVNLLKKSGEDKVGSSEKV-----SWVPDPVTGYYRPENRTDEIDVAELRSILLKN
        MARSVSS K+L A + DG   ++SRRGY+ A    V++S  +   +  +++    K  SS +      +W PDPVTGYYRPEN   EID AELR +LL +
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAA-SQGVSSSAAKAAGVNLLKKSGEDKVGSSEKV-----SWVPDPVTGYYRPENRTDEIDVAELRSILLKN

Query:  K
        +
Subjt:  K

Q39644 Late embryogenesis abundant protein Lea59.7e-1450.53Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK
        MARS+   K+L A VADG S ++SRRGYAAA+   + S       N L+ +  +  G+S   +W PDP+TGYYRPENR  EID AELR +LL +K
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK

Q93WF6 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial2.5e-1754.08Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAA-ASQGVSSSAAKAAGV--NLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK
        MARS+S+VK++SA V+   S+A+ RRGYAA A+QG  SS  ++  V   ++KK G ++  S++K+SWVPDP TGYYRPE  ++EID AELR+ LL NK
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAA-ASQGVSSSAAKAAGV--NLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK

Q9SRX6 Late embryogenis abundant protein 27.5e-1448.42Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK
        MARS+++ K+ S   ++  S+A+ RRG+AAA++     +   A   + K++GE    SSEK  WVPDP TGYYRPE  ++EID AELR+ILL NK
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK

Arabidopsis top hitse value%identityAlignment
AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein5.3e-1548.42Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK
        MARS+++ K+ S   ++  S+A+ RRG+AAA++     +   A   + K++GE    SSEK  WVPDP TGYYRPE  ++EID AELR+ILL NK
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK

AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein1.7e-0545Show/hide
Query:  SAAKAAGVNLLKKSG-EDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNKN
        +AAK     + K S  + K+   E++ W+PDP TGYYRP+N   E+D  ELRS+   NKN
Subjt:  SAAKAAGVNLLKKSG-EDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNKN

AT4G02380.1 senescence-associated gene 211.8e-1854.08Show/hide
Query:  MARSVSSVKVLSALVADGFSSALSRRGYAA-ASQGVSSSAAKAAGV--NLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK
        MARS+S+VK++SA V+   S+A+ RRGYAA A+QG  SS  ++  V   ++KK G ++  S++K+SWVPDP TGYYRPE  ++EID AELR+ LL NK
Subjt:  MARSVSSVKVLSALVADGFSSALSRRGYAA-ASQGVSSSAAKAAGV--NLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK

AT4G02380.2 senescence-associated gene 211.1e-1254.05Show/hide
Query:  RRGYAA-ASQGVSSSAAKAAGV--NLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK
        +RGYAA A+QG  SS  ++  V   ++KK G ++  S++K+SWVPDP TGYYRPE  ++EID AELR+ LL NK
Subjt:  RRGYAA-ASQGVSSSAAKAAGV--NLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNK

AT4G15910.1 drought-induced 216.1e-1145.54Show/hide
Query:  ARSVS-SVKVLSALVADGFS-SALSRRGYAAASQGVSSSAAKAAG-----VNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKN
        ARS+S +VK L +  +   S S + RR Y A SQ V+++     G     V  +++ G D+   S   +W PDPVTGYYRP NR  EID AELR +LLKN
Subjt:  ARSVS-SVKVLSALVADGFS-SALSRRGYAAASQGVSSSAAKAAG-----VNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKN

Query:  K
        K
Subjt:  K


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGCTCTGTCTCCAGCGTTAAGGTTCTCTCCGCTCTCGTCGCCGATGGATTCTCCTCCGCTCTCAGCCGGCGTGGTTACGCGGCGGCTTCGCAAGGAGTTTCGTC
GAGTGCGGCGAAGGCAGCAGGTGTTAATCTGTTAAAGAAATCCGGGGAGGACAAGGTTGGATCCTCTGAGAAGGTTTCTTGGGTGCCGGATCCTGTCACTGGCTACTATA
GGCCGGAGAATCGCACCGATGAGATCGATGTTGCCGAACTTCGATCGATCCTCCTTAAGAACAAGAAC
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGCTCTGTCTCCAGCGTTAAGGTTCTCTCCGCTCTCGTCGCCGATGGATTCTCCTCCGCTCTCAGCCGGCGTGGTTACGCGGCGGCTTCGCAAGGAGTTTCGTC
GAGTGCGGCGAAGGCAGCAGGTGTTAATCTGTTAAAGAAATCCGGGGAGGACAAGGTTGGATCCTCTGAGAAGGTTTCTTGGGTGCCGGATCCTGTCACTGGCTACTATA
GGCCGGAGAATCGCACCGATGAGATCGATGTTGCCGAACTTCGATCGATCCTCCTTAAGAACAAGAAC
Protein sequenceShow/hide protein sequence
MARSVSSVKVLSALVADGFSSALSRRGYAAASQGVSSSAAKAAGVNLLKKSGEDKVGSSEKVSWVPDPVTGYYRPENRTDEIDVAELRSILLKNKN