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MS013710 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013710
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranslocator protein homolog
Genome locationscaffold263:368938..369489
RNA-Seq ExpressionMS013710
SyntenyMS013710
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004307 - TspO/MBR-related protein
IPR038330 - TspO/MBR-related superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068008.1 translocator protein-like protein [Cucumis melo var. makuwa]1.8e-5363.16Show/hide
Query:  MASPDLKHRKPTESDDSATATAPARKPTATAR------RGLKSLAVAVSVPVSLSLLAVYLLSDPTK-FPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA
        MAS DLKHRK  +S  ++T TA     T  AR      RGL+SLA+A+S+PVSL+LL ++L S+    +P S+ +PFW PS   VN GS  SSLLMG AA
Subjt:  MASPDLKHRKPTESDDSATATAPARKPTATAR------RGLKSLAVAVSVPVSLSLLAVYLLSDPTK-FPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA

Query:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA
        WLVWA+GGFHS PNALYLY LY +L   WY L+ GAGA RL+++ACL KTAALVGCDRLFR VNPIAADLVKPCL WSV LTVVNLTM +
Subjt:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA

KAG6575839.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]4.0e-5362.11Show/hide
Query:  MASPDLKHRKPTESDDSATATAPA-------RKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA
        MAS +LKHR   +S     A A A        K  A A+RGLKSLAVAVS+P++++LL++ LL+ P  + PS+ KPFW PSA  VN GS ASSLLMG ++
Subjt:  MASPDLKHRKPTESDDSATATAPA-------RKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA

Query:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA
        WL WA+GGF + PNALYLYTLY +LC  WYGL+LGAG+  L +VACL KTA LVGCDRLFR VN IAADLV+PCL WSVFLT+V+LTMVA
Subjt:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA

XP_022151009.1 translocator protein homolog [Momordica charantia]1.1e-9298.91Show/hide
Query:  MASPDLKHRKPTESDDSATATAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAAWLVWADG
        MASPDLKHRKPTESDDSATATAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAA WLVWADG
Subjt:  MASPDLKHRKPTESDDSATATAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAAWLVWADG

Query:  GFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVAQ
        GFHSTPNALYLYTLY LLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVAQ
Subjt:  GFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVAQ

XP_022992488.1 translocator protein homolog [Cucurbita maxima]4.0e-5362.11Show/hide
Query:  MASPDLKHRK-------PTESDDSATATAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA
        MAS +LKHR        P  +D+ +T  A   K  A A+RGLKSLAVAVS+P++++LL++ LLS P  + PS+ KPFW PSA  VN GS ASSLLMG ++
Subjt:  MASPDLKHRK-------PTESDDSATATAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA

Query:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA
        WL WA+GGF + PNALYLYTLY +LC  WYGL+LGAG+  L +VACL KTA LVGCDRLFR VN IAADLV+PCL WSVFLT+V+LTMV+
Subjt:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA

XP_038897197.1 translocator protein homolog [Benincasa hispida]4.5e-5765.1Show/hide
Query:  MASPDLKHRKPTESDDSATATAPA--------RKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTK-FPPSSPKPFWFPSAAAVNLGSFASSLLMGA
        MAS +LKHRK   +DDS++ T PA         K  A  +RGLKSLA+A+++P+SL+LL+V+LLS+P   +P S+ +PFW PSA  VN GS  SSLLMG 
Subjt:  MASPDLKHRKPTESDDSATATAPA--------RKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTK-FPPSSPKPFWFPSAAAVNLGSFASSLLMGA

Query:  AAWLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA
        AAWLVWA+GGFH+ PNALYLY+LY  LC  WY L+ GAGA RL ++ACL KTAALVGCDRLFR VNPIAADLVKPCL WSVFLTVVNLTMV+
Subjt:  AAWLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA

TrEMBL top hitse value%identityAlignment
A0A0A0KAU9 Uncharacterized protein3.5e-5563.68Show/hide
Query:  MASPDLKHRKPTESDDSATATA------PARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTK-FPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA
        MAS DLKHRK  +S  ++T +A         K    A+RGL+SLA+A+S+PVSL+L  + L S+    +P S+PKPFW PSA  VN GS  SSLLMG AA
Subjt:  MASPDLKHRKPTESDDSATATA------PARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTK-FPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA

Query:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA
        WLVWA+GGFH+ PNALYLY LY +LC TWY L+ GAGA RL+A+ACL KTAALVGCDRLFR VNP+AADLVKPCL WSV LTVVNLT+V+
Subjt:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA

A0A5A7VJL5 Translocator protein-like protein8.6e-5463.16Show/hide
Query:  MASPDLKHRKPTESDDSATATAPARKPTATAR------RGLKSLAVAVSVPVSLSLLAVYLLSDPTK-FPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA
        MAS DLKHRK  +S  ++T TA     T  AR      RGL+SLA+A+S+PVSL+LL ++L S+    +P S+ +PFW PS   VN GS  SSLLMG AA
Subjt:  MASPDLKHRKPTESDDSATATAPARKPTATAR------RGLKSLAVAVSVPVSLSLLAVYLLSDPTK-FPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA

Query:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA
        WLVWA+GGFHS PNALYLY LY +L   WY L+ GAGA RL+++ACL KTAALVGCDRLFR VNPIAADLVKPCL WSV LTVVNLTM +
Subjt:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA

A0A6J1DBR2 translocator protein homolog5.5e-9398.91Show/hide
Query:  MASPDLKHRKPTESDDSATATAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAAWLVWADG
        MASPDLKHRKPTESDDSATATAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAA WLVWADG
Subjt:  MASPDLKHRKPTESDDSATATAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAAWLVWADG

Query:  GFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVAQ
        GFHSTPNALYLYTLY LLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVAQ
Subjt:  GFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVAQ

A0A6J1GQH6 translocator protein homolog2.8e-5261.5Show/hide
Query:  MASPDLKHRKPTESDDSATA----TAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAAWLV
        MAS +LKHR   +S     A    +A   K  A A+RGLKSLAVAVS+P++++LL++ LL+ P  + PS+ KPFW PSA  VN GS ASSLLMG ++WL 
Subjt:  MASPDLKHRKPTESDDSATA----TAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAAWLV

Query:  WADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA
        WA+GGF + PNALYLYTLY +LC  W+GL+LGAG+  L +VACL KTA LVGCDRLFR VN IAADLV+PCL WSVFLT+V+LTMV+
Subjt:  WADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA

A0A6J1JZC9 translocator protein homolog1.9e-5362.11Show/hide
Query:  MASPDLKHRK-------PTESDDSATATAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA
        MAS +LKHR        P  +D+ +T  A   K  A A+RGLKSLAVAVS+P++++LL++ LLS P  + PS+ KPFW PSA  VN GS ASSLLMG ++
Subjt:  MASPDLKHRK-------PTESDDSATATAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAA

Query:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA
        WL WA+GGF + PNALYLYTLY +LC  WYGL+LGAG+  L +VACL KTA LVGCDRLFR VN IAADLV+PCL WSVFLT+V+LTMV+
Subjt:  WLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVA

SwissProt top hitse value%identityAlignment
O82245 Translocator protein homolog1.9e-2939.9Show/hide
Query:  MASPDLKHRKPTESDDSATATAPARKPT------------ATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLL
        M S D+++R   + D + TA A   + +            A A+RGLKSL VAV+ PV ++L A Y L     +   +    W P    ++    ASS L
Subjt:  MASPDLKHRKPTESDDSATATAPARKPT------------ATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLL

Query:  MGAAAWLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTM
        MG AAWLVW DGGFH  PNALYLY   FLLC  W  +    G+        L ++AAL GC + F  ++P+A +LVKPCLAW+ F+  VN+ +
Subjt:  MGAAAWLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTM

Arabidopsis top hitse value%identityAlignment
AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related1.3e-3039.9Show/hide
Query:  MASPDLKHRKPTESDDSATATAPARKPT------------ATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLL
        M S D+++R   + D + TA A   + +            A A+RGLKSL VAV+ PV ++L A Y L     +   +    W P    ++    ASS L
Subjt:  MASPDLKHRKPTESDDSATATAPARKPT------------ATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLL

Query:  MGAAAWLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTM
        MG AAWLVW DGGFH  PNALYLY   FLLC  W  +    G+        L ++AAL GC + F  ++P+A +LVKPCLAW+ F+  VN+ +
Subjt:  MGAAAWLVWADGGFHSTPNALYLYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCCCCGACCTCAAACACCGCAAACCAACAGAATCAGACGATTCCGCCACCGCCACCGCCCCCGCCCGGAAGCCCACCGCCACCGCCAGACGAGGCCTCAAATC
TCTAGCCGTCGCCGTCTCCGTCCCCGTTTCCCTCTCCCTCCTCGCCGTCTACCTCCTCTCCGACCCCACCAAATTCCCCCCCTCATCTCCGAAACCCTTCTGGTTTCCCT
CCGCCGCCGCCGTGAATCTCGGCTCCTTCGCCTCCAGCCTCCTCATGGGCGCCGCCGCCTGGCTCGTCTGGGCCGACGGCGGCTTCCACTCCACGCCCAATGCTCTCTAT
CTCTACACTCTCTACTTCCTCCTCTGTTTCACCTGGTACGGTCTCCTCCTCGGGGCCGGCGCGCCCCGCCTCGCTGCGGTGGCGTGCCTCGCCAAGACGGCGGCGCTCGT
CGGCTGTGACCGGTTGTTCCGGCGAGTGAATCCCATCGCCGCGGATTTGGTTAAGCCGTGCTTGGCTTGGTCCGTTTTTCTTACCGTTGTCAATCTTACCATGGTTGCTC
AA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCCCCGACCTCAAACACCGCAAACCAACAGAATCAGACGATTCCGCCACCGCCACCGCCCCCGCCCGGAAGCCCACCGCCACCGCCAGACGAGGCCTCAAATC
TCTAGCCGTCGCCGTCTCCGTCCCCGTTTCCCTCTCCCTCCTCGCCGTCTACCTCCTCTCCGACCCCACCAAATTCCCCCCCTCATCTCCGAAACCCTTCTGGTTTCCCT
CCGCCGCCGCCGTGAATCTCGGCTCCTTCGCCTCCAGCCTCCTCATGGGCGCCGCCGCCTGGCTCGTCTGGGCCGACGGCGGCTTCCACTCCACGCCCAATGCTCTCTAT
CTCTACACTCTCTACTTCCTCCTCTGTTTCACCTGGTACGGTCTCCTCCTCGGGGCCGGCGCGCCCCGCCTCGCTGCGGTGGCGTGCCTCGCCAAGACGGCGGCGCTCGT
CGGCTGTGACCGGTTGTTCCGGCGAGTGAATCCCATCGCCGCGGATTTGGTTAAGCCGTGCTTGGCTTGGTCCGTTTTTCTTACCGTTGTCAATCTTACCATGGTTGCTC
AA
Protein sequenceShow/hide protein sequence
MASPDLKHRKPTESDDSATATAPARKPTATARRGLKSLAVAVSVPVSLSLLAVYLLSDPTKFPPSSPKPFWFPSAAAVNLGSFASSLLMGAAAWLVWADGGFHSTPNALY
LYTLYFLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSVFLTVVNLTMVAQ