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MS013712 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013712
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionheat shock factor-binding protein 1
Genome locationscaffold263:379531..379674
RNA-Seq ExpressionMS013712
SyntenyMS013712
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0070370 - cellular heat acclimation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR009643 - Heat shock factor binding 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451602.1 PREDICTED: heat shock factor-binding protein 1 [Cucumis melo]5.7e-1289.58Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +DEMGSRINELEQSINDLKAEMGVEGSPSPLP SKS ADE KK+EGSA
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
XP_015892016.1 heat shock factor-binding protein 1 [Ziziphus jujuba]1.7e-1185.42Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +D+MGSRINELEQSINDLKAEMG+EGSPSPL  SKSN DE KKEEGSA
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
XP_022150885.1 heat shock factor-binding protein 1 [Momordica charantia]5.5e-1597.92Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +DEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
XP_038899813.1 heat shock factor-binding protein isoform X1 [Benincasa hispida]2.0e-1289.58Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +DEMGSRINELEQSINDLKAEMGVEGSPSPLP SKS++DE KKEEGSA
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
XP_038899814.1 heat shock factor-binding protein isoform X2 [Benincasa hispida]2.0e-1289.58Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +DEMGSRINELEQSINDLKAEMGVEGSPSPLP SKS++DE KKEEGSA
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
TrEMBL top hitse value%identityAlignment
A0A1S3BSN9 heat shock factor-binding protein 12.8e-1289.58Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +DEMGSRINELEQSINDLKAEMGVEGSPSPLP SKS ADE KK+EGSA
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
A0A6J1D9Q0 heat shock factor-binding protein 12.7e-1597.92Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +DEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
A0A6J1GMG8 heat shock factor-binding protein 1-like isoform X23.1e-1183.33Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +DEMGSRINELEQSINDLK+EMGVEGSPSP+  SKS+ADE KK+EGSA
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
A0A6J1JVW1 heat shock factor-binding protein 1-like isoform X23.1e-1183.33Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +DEMGSRINELEQSINDLK+EMGVEGSPSP+  SKS+ADE KK+EGSA
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
A0A6P4B131 heat shock factor-binding protein 18.1e-1285.42Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +D+MGSRINELEQSINDLKAEMG+EGSPSPL  SKSN DE KKEEGSA
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
SwissProt top hitse value%identityAlignment
Q8GW48 Heat shock factor-binding protein4.9e-0664.58Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +D+MG RINELEQSINDL+AEMGVEG+P   P+SKS  DE K    S+
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
Arabidopsis top hitse value%identityAlignment
AT4G15802.1 heat shock factor binding protein3.5e-0764.58Show/hide
Query:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA
        +D+MG RINELEQSINDL+AEMGVEG+P   P+SKS  DE K    S+
Subjt:  LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGATGAGATGGGGAGCCGCATAAACGAATTGGAGCAGAGCATCAACGACCTAAAGGCTGAGATGGGCGTAGAGGGCTCACCATCACCGCTGCCTTCTTCCAAGTCAAA
TGCAGATGAAGGGAAGAAAGAGGAAGGTTCTGCT
mRNA sequenceShow/hide mRNA sequence
CTTGATGAGATGGGGAGCCGCATAAACGAATTGGAGCAGAGCATCAACGACCTAAAGGCTGAGATGGGCGTAGAGGGCTCACCATCACCGCTGCCTTCTTCCAAGTCAAA
TGCAGATGAAGGGAAGAAAGAGGAAGGTTCTGCT
Protein sequenceShow/hide protein sequence
LDEMGSRINELEQSINDLKAEMGVEGSPSPLPSSKSNADEGKKEEGSA