CuGenDBv2

Gene ID	MS013727
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	amino acid transporter AVT1A-like isoform X1
Genome location	scaffold263:514028..514326
RNA-Seq Expression	MS013727
Synteny	MS013727
Gene Ontology terms	GO:0006865 - amino acid transport (biological process) GO:0009734 - auxin-activated signaling pathway (biological process) GO:0055085 - transmembrane transport (biological process) GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0015293 - symporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KGN59445.1 hypothetical protein Csa_000748 [Cucumis sativus]

1.3e-15

69.88

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLPPRI  S+ CFILLRT L        C+AF LPFFGLVM+LI S LSILV VI+ TMC+LKIMG +ATK
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

XP_011652187.1 amino acid transporter AVT1A isoform X1 [Cucumis sativus]

1.3e-15

69.88

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLPPRI  S+ CFILLRT L        C+AF LPFFGLVM+LI S LSILV VI+ TMC+LKIMG +ATK
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

XP_022147778.1 amino acid transporter AVT1A-like isoform X1 [Momordica charantia]

1.8e-20

79.52

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLP RI DS+WCFILLRTTL     F   +AF LPFFGLVMALI SFLSILV VII TMCFLKIMGREATK
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

XP_031738577.1 amino acid transporter AVT1A isoform X2 [Cucumis sativus]

1.3e-15

69.88

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLPPRI  S+ CFILLRT L        C+AF LPFFGLVM+LI S LSILV VI+ TMC+LKIMG +ATK
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

XP_034695108.1 amino acid transporter AVT1A isoform X1 [Vitis riparia]

1.7e-15

67.47

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLP RI +S WCFILLRT L        C+AF LPFFGLVM+LI S LS+LV VII T+C+L+IMG++ATK
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBQ3 Aa_trans domain-containing protein

6.5e-16

69.88

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLPPRI  S+ CFILLRT L        C+AF LPFFGLVM+LI S LSILV VI+ TMC+LKIMG +ATK
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

A0A6J1D210 amino acid transporter AVT1A-like isoform X1

8.7e-21

79.52

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLP RI DS+WCFILLRTTL     F   +AF LPFFGLVMALI SFLSILV VII TMCFLKIMGREATK
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

A0A6J1I1A7 amino acid transporter AVT1A-like isoform X1

1.4e-15

68.67

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLP RI +S WCFILLRT L        C+AF LPFFGLVMALI S LSIL+ VI+  +CFLKIMG EA+K
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

A0A6J1I648 amino acid transporter AVT1A-like isoform X2

1.4e-15

68.67

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLP RI +S WCFILLRT L        C+AF LPFFGLVMALI S LSIL+ VI+  +CFLKIMG EA+K
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

A0A6J1I7V6 amino acid transporter AVT1A-like isoform X3

1.4e-15

68.67

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLP RI +S WCFILLRT L        C+AF LPFFGLVMALI S LSIL+ VI+  +CFLKIMG EA+K
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

SwissProt top hits

e value

%identity

Alignment

F4IUW3 Amino acid transporter AVT1C

1.5e-06

42.68

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREAT
        + ++P+A S+EEL+P R + SHW  I +RT L         +   +PFFGLVM+LI S L++LV +I+   CFL I+ R+ T
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREAT

O80668 Amino acid transporter AVT1A

6.2e-16

60.24

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLP R+ ++ WCF+LLRT L        C AF +PFFGL+MALI S LSILV +I+  +CF+KIMG +AT+
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

Arabidopsis top hits

e value

%identity

Alignment

AT2G39130.1 Transmembrane amino acid transporter family protein

1.1e-07

42.68

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREAT
        + ++P+A S+EEL+P R + SHW  I +RT L         +   +PFFGLVM+LI S L++LV +I+   CFL I+ R+ T
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREAT

AT2G41190.1 Transmembrane amino acid transporter family protein

4.4e-17

60.24

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Query:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK
        +LMNPLARSIEELLP R+ ++ WCF+LLRT L        C AF +PFFGL+MALI S LSILV +I+  +CF+KIMG +AT+
Subjt:  MLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALI-SFLSILVVVIISTMCFLKIMGREATK

Sequences

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CDS sequence

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ATCTTTGAAACATGCCAAAACACGCTGTTACCTCTAAAGTTGCCACCAATGTTGATGAATCCATTGGCAAGAAGTATAGAGGAGCTACTACCACCTAGAATTTTAGATAG
CCACTGGTGTTTCATTCTTCTAAGAACAACACTAGAACACCACTTTTGTTTCTTCTACTGCATAGCTTTCCCTCTGCCCTTTTTTGGTCTTGTGATGGCTTTAATTTCAT
TTCTAAGCATACTCGTAGTGGTAATAATATCAACAATGTGTTTTTTAAAAATCATGGGAAGGGAAGCTACAAAG

mRNA sequence

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Protein sequence

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IFETCQNTLLPLKLPPMLMNPLARSIEELLPPRILDSHWCFILLRTTLEHHFCFFYCIAFPLPFFGLVMALISFLSILVVVIISTMCFLKIMGREATK

MS013727 (gene) of Bitter gourd (TR) v1 genome