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MS013730 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013730
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCW-type domain-containing protein
Genome locationscaffold263:550165..550326
RNA-Seq ExpressionMS013730
SyntenyMS013730
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147308.1 uncharacterized protein LOC111016289 isoform X1 [Momordica charantia]3.9e-17100Show/hide
Query:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
        RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
Subjt:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
XP_022147326.1 uncharacterized protein LOC111016289 isoform X2 [Momordica charantia]3.9e-17100Show/hide
Query:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
        RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
Subjt:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
XP_022147343.1 uncharacterized protein LOC111016289 isoform X4 [Momordica charantia]3.9e-17100Show/hide
Query:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
        RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
Subjt:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
XP_022147360.1 peroxisome biogenesis protein 6-like isoform X6 [Momordica charantia]3.9e-17100Show/hide
Query:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
        RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
Subjt:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
XP_038876721.1 cysteine-tryptophan domain-containing zinc finger protein 7-like isoform X1 [Benincasa hispida]2.1e-1892.59Show/hide
Query:  MISVGGRDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
        MISVGGRDARKE+GL GARREMEDTELEEGEA SYQNNEDFDSNIDPD+ALSYI
Subjt:  MISVGGRDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
TrEMBL top hitse value%identityAlignment
A0A5D3D3G1 Zinc finger, CW-type7.4e-1491.49Show/hide
Query:  DARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
        DARKEI L GARREMEDTELEEGEA SYQNNEDFDSNIDPD+ALSYI
Subjt:  DARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
A0A6J1CZY4 peroxisome biogenesis protein 6-like isoform X61.9e-17100Show/hide
Query:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
        RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
Subjt:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
A0A6J1D125 uncharacterized protein LOC111016289 isoform X41.9e-17100Show/hide
Query:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
        RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
Subjt:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
A0A6J1D207 uncharacterized protein LOC111016289 isoform X21.9e-17100Show/hide
Query:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
        RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
Subjt:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
A0A6J1D222 uncharacterized protein LOC111016289 isoform X11.9e-17100Show/hide
Query:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
        RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
Subjt:  RDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G62900.1 CW-type Zinc Finger1.1e-0460.61Show/hide
Query:  MEDTELEEGEACSYQNNEDFDSNIDPDVALSYI
        ME++ELEEGEACSY    ++  +IDPD  LSYI
Subjt:  MEDTELEEGEACSYQNNEDFDSNIDPDVALSYI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCTGTGGGGGGTAGGGATGCGAGGAAGGAAATAGGGCTAGGCGGTGCCAGGAGAGAGATGGAAGATACTGAGCTTGAAGAAGGAGAAGCTTGCTCCTACCAGAA
CAATGAAGATTTTGATTCAAATATTGACCCTGATGTTGCTCTCTCCTACATC
mRNA sequenceShow/hide mRNA sequence
ATGATTTCTGTGGGGGGTAGGGATGCGAGGAAGGAAATAGGGCTAGGCGGTGCCAGGAGAGAGATGGAAGATACTGAGCTTGAAGAAGGAGAAGCTTGCTCCTACCAGAA
CAATGAAGATTTTGATTCAAATATTGACCCTGATGTTGCTCTCTCCTACATC
Protein sequenceShow/hide protein sequence
MISVGGRDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYI