; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013743 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013743
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationscaffold263:637079..637402
RNA-Seq ExpressionMS013743
SyntenyMS013743
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]2.3e-0847.06Show/hide
Query:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAG----TLLQTAAHPIADDNGESS--NLGRKMNVEIKRRIGRPVVTSG-----HLSASDRSRV
        MAAI+ LVS+ALLALL FSESL  +         +SL G     +L T AH I + + ESS      K++ + +RRI RP++ SG     H SA +RSRV
Subjt:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAG----TLLQTAAHPIADDNGESS--NLGRKMNVEIKRRIGRPVVTSG-----HLSASDRSRV

Query:  SSFGAGSLLCIWIALGLLL
        +SF  GS+LCI I LGL L
Subjt:  SSFGAGSLLCIWIALGLLL

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]3.9e-0851.82Show/hide
Query:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVEIKRRIG---RPVV-----TSGHLSASDRSR
        MAAIKSL+ ++LLALL FSESL+ ++A  RG A NS+ G L    LQTA H IAD  G       KMNV IKR  G   RPV      T    SA+ RS+
Subjt:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVEIKRRIG---RPVV-----TSGHLSASDRSR

Query:  VSSFGAGSLL
        V+SFG G LL
Subjt:  VSSFGAGSLL

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]7.3e-1561.61Show/hide
Query:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVEIKRRIGRPVVTSGHLSASDRSRVSSFGAGS
        MAA+KSLVSVALLALLLFSESL A SA  R    NSL G L    LQTAAH IAD++ ESS   RKMNV IKRR+ RPV T    SA++RSR++S G GS
Subjt:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVEIKRRIGRPVVTSGHLSASDRSRVSSFGAGS

Query:  LLCIWIALGLLL
        +L   + LGL L
Subjt:  LLCIWIALGLLL

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]3.9e-0848.18Show/hide
Query:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTLLQTAAHPIADDNGESSNLGRKMNVEIKRRIG-RPV-VTSGHLSASDRSRVSSFGAGSLL
        MAAIK+L+S+AL+ALLLF ESL  ++A  RG A  SLAG L +      AD +  +    +K NV IKRR+  RPV +     SA++RSR +  G GS+L
Subjt:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTLLQTAAHPIADDNGESSNLGRKMNVEIKRRIG-RPV-VTSGHLSASDRSRVSSFGAGSLL

Query:  CIWIALGLLL
        CI++ LGL L
Subjt:  CIWIALGLLL

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]2.3e-0851.38Show/hide
Query:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVEIK-------RRIGRPVVTSGHLSASDRSRV
        MAAIKSL+S++LLALL FSESL+ ++A  RG A NS+   L    LQTA H IAD  G       KMNV IK       R IG    T    SA++RSRV
Subjt:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVEIK-------RRIGRPVVTSGHLSASDRSRV

Query:  SSFGAGSLL
         SFG G LL
Subjt:  SSFGAGSLL

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ7 Uncharacterized protein1.1e-0851.38Show/hide
Query:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVEIK-------RRIGRPVVTSGHLSASDRSRV
        MAAIKSL+S++LLALL FSESL+ ++A  RG A NS+   L    LQTA H IAD  G       KMNV IK       R IG    T    SA++RSRV
Subjt:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVEIK-------RRIGRPVVTSGHLSASDRSRV

Query:  SSFGAGSLL
         SFG G LL
Subjt:  SSFGAGSLL

A0A5A7VLE5 Protein no-on-transient A-like1.9e-0851.82Show/hide
Query:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVEIKRRIG---RPVV-----TSGHLSASDRSR
        MAAIKSL+ ++LLALL FSESL+ ++A  RG A NS+ G L    LQTA H IAD  G       KMNV IKR  G   RPV      T    SA+ RS+
Subjt:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVEIKRRIG---RPVV-----TSGHLSASDRSR

Query:  VSSFGAGSLL
        V+SFG G LL
Subjt:  VSSFGAGSLL

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like1.1e-0847.06Show/hide
Query:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAG----TLLQTAAHPIADDNGESS--NLGRKMNVEIKRRIGRPVVTSG-----HLSASDRSRV
        MAAI+ LVS+ALLALL FSESL  +         +SL G     +L T AH I + + ESS      K++ + +RRI RP++ SG     H SA +RSRV
Subjt:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAG----TLLQTAAHPIADDNGESS--NLGRKMNVEIKRRIGRPVVTSG-----HLSASDRSRV

Query:  SSFGAGSLLCIWIALGLLL
        +SF  GS+LCI I LGL L
Subjt:  SSFGAGSLLCIWIALGLLL

A0A6J1GRX2 uncharacterized protein LOC1114564661.6e-0444.83Show/hide
Query:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVE--IKRRIGRPV--VTSGHLSASDRSRVSSF
        MA IKSL+S+ALLALLL SE L   SAA  G AP+ LA       LQTA      +NG    +G + + E  I+RR  R V        S+++ S+ SSF
Subjt:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVE--IKRRIGRPV--VTSGHLSASDRSRVSSF

Query:  GAGSLLCIWIALGLLL
        G GSLLC+    GL L
Subjt:  GAGSLLCIWIALGLLL

A0A6J1JZB1 uncharacterized protein LOC111488793 isoform X11.9e-0545.69Show/hide
Query:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVE--IKRRIGRPV--VTSGHLSASDRSRVSSF
        MA IKSL+S+ALLALLL  E L   SAA  G AP+ LAG      LQTA      +NG    +G + + E  I+RR  R V        S+++ SR SSF
Subjt:  MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTL----LQTAAHPIADDNGESSNLGRKMNVE--IKRRIGRPV--VTSGHLSASDRSRVSSF

Query:  GAGSLLCIWIALGLLL
        G GSLLC+    GL L
Subjt:  GAGSLLCIWIALGLLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGATTAAATCCCTTGTTTCCGTAGCTCTTCTCGCTCTCCTCTTATTCTCTGAATCCCTAGCCGCCACTTCCGCCGCCGGTCGCGGCGAGGCTCCGAATTCTCT
CGCCGGAACGCTCCTTCAGACGGCGGCTCATCCGATTGCGGATGACAATGGCGAGTCATCTAATTTGGGAAGAAAGATGAATGTTGAAATCAAGAGGCGGATCGGACGGC
CTGTGGTAACTTCCGGCCATCTATCGGCGTCGGATCGAAGCCGAGTATCGTCCTTTGGCGCTGGATCTCTGCTCTGTATATGGATTGCTTTGGGATTGCTCCTG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCGATTAAATCCCTTGTTTCCGTAGCTCTTCTCGCTCTCCTCTTATTCTCTGAATCCCTAGCCGCCACTTCCGCCGCCGGTCGCGGCGAGGCTCCGAATTCTCT
CGCCGGAACGCTCCTTCAGACGGCGGCTCATCCGATTGCGGATGACAATGGCGAGTCATCTAATTTGGGAAGAAAGATGAATGTTGAAATCAAGAGGCGGATCGGACGGC
CTGTGGTAACTTCCGGCCATCTATCGGCGTCGGATCGAAGCCGAGTATCGTCCTTTGGCGCTGGATCTCTGCTCTGTATATGGATTGCTTTGGGATTGCTCCTG
Protein sequenceShow/hide protein sequence
MAAIKSLVSVALLALLLFSESLAATSAAGRGEAPNSLAGTLLQTAAHPIADDNGESSNLGRKMNVEIKRRIGRPVVTSGHLSASDRSRVSSFGAGSLLCIWIALGLLL